RNA–Protein interactions for RNA: ENST00000394310.7

CACNB1-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CACNB1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-203ENST00000394310 ARHGAP35Q9NRY4 1499 aa34.93■■■■□ 3.18
CACNB1-203ENST00000394310 FBLN2P98095 1184 aa34.88■■■■□ 3.17
CACNB1-203ENST00000394310 RANGAP1P46060 587 aaPredicted RBP34.87■■■■□ 3.17
CACNB1-203ENST00000394310 KIAA0586Q9BVV6 1533 aa34.86■■■■□ 3.17
CACNB1-203ENST00000394310 ARAP1Q96P48 1450 aa34.86■■■■□ 3.17
CACNB1-203ENST00000394310 EFCAB5A4FU69 1503 aa34.86■■■■□ 3.17
CACNB1-203ENST00000394310 VPS8Q8N3P4 1428 aa34.85■■■■□ 3.17
CACNB1-203ENST00000394310 NUP160Q12769 1436 aa34.83■■■■□ 3.17
CACNB1-203ENST00000394310 IQGAP2Q13576 1575 aa34.82■■■■□ 3.16
CACNB1-203ENST00000394310 CEP170Q5SW79 1584 aa34.76■■■■□ 3.16
CACNB1-203ENST00000394310 SAMD9Q5K651 1589 aa34.74■■■■□ 3.15
CACNB1-203ENST00000394310 UGGT2Q9NYU1 1516 aa34.72■■■■□ 3.15
CACNB1-203ENST00000394310 CHD1O14646 1710 aa34.66■■■■□ 3.14
CACNB1-203ENST00000394310 FHOD3Q2V2M9 1422 aa34.58■■■■□ 3.13
CACNB1-203ENST00000394310 P3H3Q8IVL6 736 aa34.55■■■■□ 3.12
CACNB1-203ENST00000394310 FMN1Q68DA7 1419 aa34.55■■■■□ 3.12
CACNB1-203ENST00000394310 JPH4Q96JJ6 628 aa34.52■■■■□ 3.12
CACNB1-203ENST00000394310 DISP1Q96F81 1524 aa34.51■■■■□ 3.12
CACNB1-203ENST00000394310 KIAA0556O60303 1618 aa34.46■■■■□ 3.11
CACNB1-203ENST00000394310 APLP2Q06481 763 aa34.44■■■■□ 3.1
CACNB1-203ENST00000394310 CASKIN1Q8WXD9 1431 aa34.44■■■■□ 3.1
CACNB1-203ENST00000394310 MAP3K1Q13233 1512 aa34.41■■■■□ 3.1
CACNB1-203ENST00000394310 CARMIL2Q6F5E8 1435 aa34.41■■■■□ 3.1
CACNB1-203ENST00000394310 FYCO1Q9BQS8 1478 aa34.4■■■■□ 3.1
CACNB1-203ENST00000394310 SHROOM2Q13796 1616 aa34.37■■■■□ 3.09
CACNB1-203ENST00000394310 CLASP1Q7Z460 1538 aa34.37■■■■□ 3.09
CACNB1-203ENST00000394310 PCF11O94913 1555 aaKnown RBP34.35■■■■□ 3.09
CACNB1-203ENST00000394310 TRIM26Q12899 539 aaPredicted RBP34.32■■■■□ 3.08
CACNB1-203ENST00000394310 PPARGC1BQ86YN6 1023 aaKnown RBP34.28■■■■□ 3.08
CACNB1-203ENST00000394310 PRG4Q92954 1404 aaPredicted RBP34.28■■■■□ 3.08
CACNB1-203ENST00000394310 OSCARQ8IYS5 282 aa34.27■■■■□ 3.08
CACNB1-203ENST00000394310 TIAM1Q13009 1591 aa34.24■■■■□ 3.07
CACNB1-203ENST00000394310 CFAP43Q8NDM7 1665 aa34.17■■■■□ 3.06
CACNB1-203ENST00000394310 KANK4Q5T7N3 995 aaPredicted RBP34.16■■■■□ 3.06
CACNB1-203ENST00000394310 HECW1Q76N89 1606 aa34.15■■■■□ 3.06
CACNB1-203ENST00000394310 ATP1B4Q9UN42 357 aaPredicted RBP34.12■■■■□ 3.05
CACNB1-203ENST00000394310 CCDC18Q5T9S5 1454 aa34.11■■■■□ 3.05
CACNB1-203ENST00000394310 LRRC9Q6ZRR7 1453 aa34.11■■■■□ 3.05
CACNB1-203ENST00000394310 TTBK1Q5TCY1 1321 aaPredicted RBP34.1■■■■□ 3.05
CACNB1-203ENST00000394310 RAPGEF6Q8TEU7 1601 aa34.09■■■■□ 3.05
CACNB1-203ENST00000394310 PCGF6Q9BYE7 350 aa34.09■■■■□ 3.05
CACNB1-203ENST00000394310 LRRIQ1Q96JM4 1722 aa34.07■■■■□ 3.05
CACNB1-203ENST00000394310 PTPRGP23470 1445 aa34.07■■■■□ 3.04
CACNB1-203ENST00000394310 EPRSP07814 1512 aaKnown RBP34.05■■■■□ 3.04
CACNB1-203ENST00000394310 ABCA8O94911 1581 aa34.02■■■■□ 3.04
CACNB1-203ENST00000394310 NUP153P49790 1475 aaKnown RBP34.02■■■■□ 3.04
CACNB1-203ENST00000394310 PLB1Q6P1J6 1458 aa34.01■■■■□ 3.04
CACNB1-203ENST00000394310 ERCC6L2Q5T890 1561 aa34.01■■■■□ 3.04
CACNB1-203ENST00000394310 MTUS2Q5JR59 1369 aa33.89■■■■□ 3.02
CACNB1-203ENST00000394310 UACAQ9BZF9 1416 aa33.88■■■■□ 3.01
CACNB1-203ENST00000394310 CDK13Q14004 1512 aaKnown RBP33.88■■■■□ 3.01
CACNB1-203ENST00000394310 EHBP1L1Q8N3D4 1523 aa33.87■■■■□ 3.01
CACNB1-203ENST00000394310 CDK11AQ9UQ88 783 aaPredicted RBP33.83■■■■□ 3.01
CACNB1-203ENST00000394310 MAGI3Q5TCQ9 1506 aa33.82■■■■□ 3.01
CACNB1-203ENST00000394310 RRBP1Q9P2E9 1410 aaKnown RBP33.8■■■■□ 3
CACNB1-203ENST00000394310 UHRF1BP1LA0JNW5 1464 aa33.8■■■■□ 3
CACNB1-203ENST00000394310 ATP10BO94823 1461 aa33.79■■■■□ 3
CACNB1-203ENST00000394310 ABCC2Q92887 1545 aa33.78■■■■□ 3
CACNB1-203ENST00000394310 SUPT6HQ7KZ85 1726 aaKnown RBP33.75■■■□□ 2.99
CACNB1-203ENST00000394310 ARID3CA6NKF2 412 aa33.75■■■□□ 2.99
CACNB1-203ENST00000394310 ARHGEF11O15085 1522 aa33.75■■■□□ 2.99
CACNB1-203ENST00000394310 PHLDB1Q86UU1 1377 aa33.74■■■□□ 2.99
CACNB1-203ENST00000394310 NCOA2Q15596 1464 aa33.71■■■□□ 2.99
CACNB1-203ENST00000394310 TROQ12816 1431 aaPredicted RBP33.69■■■□□ 2.98
CACNB1-203ENST00000394310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.68■■■□□ 2.98
CACNB1-203ENST00000394310 HNRNPUL2Q1KMD3 747 aaKnown RBP33.68■■■□□ 2.98
CACNB1-203ENST00000394310 CCNB3Q8WWL7 1395 aa33.67■■■□□ 2.98
CACNB1-203ENST00000394310 PLEKHD1A6NEE1 506 aa33.63■■■□□ 2.97
CACNB1-203ENST00000394310 KDM5BQ9UGL1 1544 aa33.63■■■□□ 2.97
CACNB1-203ENST00000394310 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.6■■■□□ 2.97
CACNB1-203ENST00000394310 MYOM3Q5VTT5 1437 aa33.59■■■□□ 2.97
CACNB1-203ENST00000394310 ADCY10Q96PN6 1610 aa33.58■■■□□ 2.97
CACNB1-203ENST00000394310 FGD6Q6ZV73 1430 aa33.55■■■□□ 2.96
CACNB1-203ENST00000394310 MIA2Q96PC5 1412 aa33.5■■■□□ 2.95
CACNB1-203ENST00000394310 ZCCHC11Q5TAX3 1644 aaKnown RBP33.49■■■□□ 2.95
CACNB1-203ENST00000394310 KIF14Q15058 1648 aa33.45■■■□□ 2.95
CACNB1-203ENST00000394310 RIMBP3CA6NJZ7 1639 aa33.44■■■□□ 2.94
CACNB1-203ENST00000394310 RIMBP3BA6NNM3 1639 aa33.44■■■□□ 2.94
CACNB1-203ENST00000394310 RIMBP3Q9UFD9 1639 aa33.44■■■□□ 2.94
CACNB1-203ENST00000394310 ABCC10Q5T3U5 1492 aa33.42■■■□□ 2.94
CACNB1-203ENST00000394310 TCOF1Q13428 1488 aaKnown RBP33.41■■■□□ 2.94
CACNB1-203ENST00000394310 CYB5RLQ6IPT4 315 aa33.4■■■□□ 2.94
CACNB1-203ENST00000394310 GPATCH8Q9UKJ3 1502 aaKnown RBP33.37■■■□□ 2.93
CACNB1-203ENST00000394310 PTPN23Q9H3S7 1636 aa33.37■■■□□ 2.93
CACNB1-203ENST00000394310 FAM50AQ14320 339 aaKnown RBP33.36■■■□□ 2.93
CACNB1-203ENST00000394310 ITSN2Q9NZM3 1697 aa33.34■■■□□ 2.93
CACNB1-203ENST00000394310 NPM1P06748 294 aaKnown RBP eCLIP33.29■■■□□ 2.92
CACNB1-203ENST00000394310 WDR7Q9Y4E6 1490 aa33.26■■■□□ 2.92
CACNB1-203ENST00000394310 CDC42BPAQ5VT25 1732 aa33.26■■■□□ 2.91
CACNB1-203ENST00000394310 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.25■■■□□ 2.91
CACNB1-203ENST00000394310 CFDP1Q9UEE9 299 aaPredicted RBP33.25■■■□□ 2.91
CACNB1-203ENST00000394310 ASXL2Q76L83 1435 aa33.2■■■□□ 2.91
CACNB1-203ENST00000394310 KCNH8Q96L42 1107 aa33.19■■■□□ 2.9
CACNB1-203ENST00000394310 ITGAEP38570 1179 aa33.18■■■□□ 2.9
CACNB1-203ENST00000394310 TTC37Q6PGP7 1564 aa33.17■■■□□ 2.9
CACNB1-203ENST00000394310 PREX2Q70Z35 1606 aa33.16■■■□□ 2.9
CACNB1-203ENST00000394310 CAMSAP2Q08AD1 1489 aa33.13■■■□□ 2.89
CACNB1-203ENST00000394310 PTPRKQ15262 1439 aa33.12■■■□□ 2.89
CACNB1-203ENST00000394310 CDC42BPBQ9Y5S2 1711 aa33.12■■■□□ 2.89
CACNB1-203ENST00000394310 ZNF644Q9H582 1327 aaPredicted RBP33.12■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms