RNA–Protein interactions for RNA: ENST00000394013.6

RNF41-202, Transcript of ring finger protein 41, humanhuman

TSL 1 (best) BASIC

Gene RNF41, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-202ENST00000394013 ZEB1P37275 1124 aaPredicted RBP21.8■■□□□ 1.08
RNF41-202ENST00000394013 ATP1B4Q9UN42 357 aaPredicted RBP21.78■■□□□ 1.08
RNF41-202ENST00000394013 ZNF608Q9ULD9 1512 aaPredicted RBP21.77■■□□□ 1.08
RNF41-202ENST00000394013 ERCC6Q03468 1493 aa21.73■■□□□ 1.07
RNF41-202ENST00000394013 CTTNBP2Q8WZ74 1663 aa21.73■■□□□ 1.07
RNF41-202ENST00000394013 PBRM1Q86U86 1689 aa21.69■■□□□ 1.06
RNF41-202ENST00000394013 PCF11O94913 1555 aaKnown RBP21.69■■□□□ 1.06
RNF41-202ENST00000394013 WDR62O43379 1518 aa21.68■■□□□ 1.06
RNF41-202ENST00000394013 TIAM1Q13009 1591 aa21.64■■□□□ 1.05
RNF41-202ENST00000394013 ITGAEP38570 1179 aa21.62■■□□□ 1.05
RNF41-202ENST00000394013 IFT140Q96RY7 1462 aa21.6■■□□□ 1.05
RNF41-202ENST00000394013 THOC2Q8NI27 1593 aaKnown RBP21.59■■□□□ 1.05
RNF41-202ENST00000394013 ADAMTS12P58397 1594 aa21.59■■□□□ 1.05
RNF41-202ENST00000394013 FHAD1B1AJZ9 1412 aa21.58■■□□□ 1.04
RNF41-202ENST00000394013 GRIN2BQ13224 1484 aa21.57■■□□□ 1.04
RNF41-202ENST00000394013 EFCAB5A4FU69 1503 aa21.57■■□□□ 1.04
RNF41-202ENST00000394013 LRRC9Q6ZRR7 1453 aa21.56■■□□□ 1.04
RNF41-202ENST00000394013 RRBP1Q9P2E9 1410 aaKnown RBP21.54■■□□□ 1.04
RNF41-202ENST00000394013 EIF4G3O43432 1585 aaKnown RBP21.54■■□□□ 1.04
RNF41-202ENST00000394013 PHLDB1Q86UU1 1377 aa21.53■■□□□ 1.04
RNF41-202ENST00000394013 SAMD9Q5K651 1589 aa21.53■■□□□ 1.04
RNF41-202ENST00000394013 SNAPC4Q5SXM2 1469 aa21.53■■□□□ 1.04
RNF41-202ENST00000394013 CCNB3Q8WWL7 1395 aa21.52■■□□□ 1.03
RNF41-202ENST00000394013 CASKIN1Q8WXD9 1431 aa21.51■■□□□ 1.03
RNF41-202ENST00000394013 CFAP43Q8NDM7 1665 aa21.5■■□□□ 1.03
RNF41-202ENST00000394013 ARID3CA6NKF2 412 aa21.49■■□□□ 1.03
RNF41-202ENST00000394013 FYCO1Q9BQS8 1478 aa21.49■■□□□ 1.03
RNF41-202ENST00000394013 LRRIQ1Q96JM4 1722 aa21.48■■□□□ 1.03
RNF41-202ENST00000394013 MAP3K1Q13233 1512 aa21.47■■□□□ 1.03
RNF41-202ENST00000394013 FBLN2P98095 1184 aa21.46■■□□□ 1.03
RNF41-202ENST00000394013 FMN1Q68DA7 1419 aa21.45■■□□□ 1.02
RNF41-202ENST00000394013 IQGAP2Q13576 1575 aa21.44■■□□□ 1.02
RNF41-202ENST00000394013 FAM50AQ14320 339 aaKnown RBP21.43■■□□□ 1.02
RNF41-202ENST00000394013 GRIN2AQ12879 1464 aa21.38■■□□□ 1.01
RNF41-202ENST00000394013 CHMP7Q8WUX9 453 aaPredicted RBP21.36■■□□□ 1.01
RNF41-202ENST00000394013 MTUS2Q5JR59 1369 aa21.34■■□□□ 1.01
RNF41-202ENST00000394013 DHX57Q6P158 1386 aaKnown RBP21.34■■□□□ 1.01
RNF41-202ENST00000394013 MAGI3Q5TCQ9 1506 aa21.32■■□□□ 1
RNF41-202ENST00000394013 CEP170Q5SW79 1584 aa21.3■■□□□ 1
RNF41-202ENST00000394013 CDK13Q14004 1512 aaKnown RBP21.29■■□□□ 1
RNF41-202ENST00000394013 DISP1Q96F81 1524 aa21.29■■□□□ 1
RNF41-202ENST00000394013 KIAA0586Q9BVV6 1533 aa21.29■■□□□ 1
RNF41-202ENST00000394013 UGGT2Q9NYU1 1516 aa21.28■■□□□ 1
RNF41-202ENST00000394013 MAGI1Q96QZ7 1491 aaPredicted RBP21.27■■□□□ 1
RNF41-202ENST00000394013 SYNJ2O15056 1496 aa21.27■■□□□ 1
RNF41-202ENST00000394013 RAB3GAP2Q9H2M9 1393 aa21.27■□□□□ 0.99
RNF41-202ENST00000394013 NCOA2Q15596 1464 aa21.24■□□□□ 0.99
RNF41-202ENST00000394013 KIAA0556O60303 1618 aa21.24■□□□□ 0.99
RNF41-202ENST00000394013 FGD6Q6ZV73 1430 aa21.22■□□□□ 0.99
RNF41-202ENST00000394013 EPRSP07814 1512 aaKnown RBP21.22■□□□□ 0.99
RNF41-202ENST00000394013 HECW1Q76N89 1606 aa21.19■□□□□ 0.98
RNF41-202ENST00000394013 PTPRKQ15262 1439 aa21.17■□□□□ 0.98
RNF41-202ENST00000394013 JPH4Q96JJ6 628 aa21.16■□□□□ 0.98
RNF41-202ENST00000394013 SETD5Q9C0A6 1442 aa21.16■□□□□ 0.98
RNF41-202ENST00000394013 EHBP1L1Q8N3D4 1523 aa21.15■□□□□ 0.98
RNF41-202ENST00000394013 SUPT6HQ7KZ85 1726 aaKnown RBP21.14■□□□□ 0.98
RNF41-202ENST00000394013 NUP160Q12769 1436 aa21.14■□□□□ 0.97
RNF41-202ENST00000394013 MYOM3Q5VTT5 1437 aa21.13■□□□□ 0.97
RNF41-202ENST00000394013 NUP153P49790 1475 aaKnown RBP21.13■□□□□ 0.97
RNF41-202ENST00000394013 CCDC18Q5T9S5 1454 aa21.13■□□□□ 0.97
RNF41-202ENST00000394013 PLB1Q6P1J6 1458 aa21.13■□□□□ 0.97
RNF41-202ENST00000394013 ARHGEF11O15085 1522 aa21.08■□□□□ 0.97
RNF41-202ENST00000394013 MAPKBP1O60336 1514 aa21.08■□□□□ 0.97
RNF41-202ENST00000394013 ZNF316A6NFI3 1004 aaPredicted RBP21.07■□□□□ 0.96
RNF41-202ENST00000394013 DIEXFQ68CQ4 756 aaKnown RBP21.07■□□□□ 0.96
RNF41-202ENST00000394013 CHIC2Q9UKJ5 165 aa21.07■□□□□ 0.96
RNF41-202ENST00000394013 RAPGEF6Q8TEU7 1601 aa21.07■□□□□ 0.96
RNF41-202ENST00000394013 PTPN23Q9H3S7 1636 aa21.05■□□□□ 0.96
RNF41-202ENST00000394013 SIN3AQ96ST3 1273 aa21.04■□□□□ 0.96
RNF41-202ENST00000394013 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.03■□□□□ 0.96
RNF41-202ENST00000394013 CHD1O14646 1710 aa21.03■□□□□ 0.96
RNF41-202ENST00000394013 PRG4Q92954 1404 aaPredicted RBP21.02■□□□□ 0.96
RNF41-202ENST00000394013 ZNF644Q9H582 1327 aaPredicted RBP21.02■□□□□ 0.96
RNF41-202ENST00000394013 CLSPNQ9HAW4 1339 aa21.01■□□□□ 0.95
RNF41-202ENST00000394013 RRP7BPQ9NSQ0 103 aa21.01■□□□□ 0.95
RNF41-202ENST00000394013 NEUROD1Q13562 356 aa21■□□□□ 0.95
RNF41-202ENST00000394013 CARMIL2Q6F5E8 1435 aa20.99■□□□□ 0.95
RNF41-202ENST00000394013 NAIPQ13075 1403 aa20.94■□□□□ 0.94
RNF41-202ENST00000394013 HFM1A2PYH4 1435 aa20.92■□□□□ 0.94
RNF41-202ENST00000394013 KIF14Q15058 1648 aa20.92■□□□□ 0.94
RNF41-202ENST00000394013 TCOF1Q13428 1488 aaKnown RBP20.92■□□□□ 0.94
RNF41-202ENST00000394013 ERCC6L2Q5T890 1561 aa20.91■□□□□ 0.94
RNF41-202ENST00000394013 KDM6BO15054 1643 aa20.9■□□□□ 0.94
RNF41-202ENST00000394013 TROQ12816 1431 aaPredicted RBP20.88■□□□□ 0.93
RNF41-202ENST00000394013 ZNF777Q9ULD5 760 aaPredicted RBP20.87■□□□□ 0.93
RNF41-202ENST00000394013 CDK11AQ9UQ88 783 aaPredicted RBP20.87■□□□□ 0.93
RNF41-202ENST00000394013 ABCA8O94911 1581 aa20.87■□□□□ 0.93
RNF41-202ENST00000394013 ATP10BO94823 1461 aa20.86■□□□□ 0.93
RNF41-202ENST00000394013 MIA2Q96PC5 1412 aa20.85■□□□□ 0.93
RNF41-202ENST00000394013 PTPRGP23470 1445 aa20.85■□□□□ 0.93
RNF41-202ENST00000394013 CFDP1Q9UEE9 299 aaPredicted RBP20.81■□□□□ 0.92
RNF41-202ENST00000394013 ABCC5O15440 1437 aa20.81■□□□□ 0.92
RNF41-202ENST00000394013 GPATCH8Q9UKJ3 1502 aaKnown RBP20.8■□□□□ 0.92
RNF41-202ENST00000394013 DAPK1P53355 1430 aa20.8■□□□□ 0.92
RNF41-202ENST00000394013 UACAQ9BZF9 1416 aa20.79■□□□□ 0.92
RNF41-202ENST00000394013 TRIM52Q96A61 297 aa20.79■□□□□ 0.92
RNF41-202ENST00000394013 PLEKHD1A6NEE1 506 aa20.79■□□□□ 0.92
RNF41-202ENST00000394013 MIER1Q8N108 512 aa20.79■□□□□ 0.92
RNF41-202ENST00000394013 FOXD1Q16676 465 aa20.78■□□□□ 0.92
RNF41-202ENST00000394013 CAMSAP2Q08AD1 1489 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms