RNA–Protein interactions for RNA: ENST00000392662.5

ACTL6A-201, Transcript of actin like 6A, humanhuman

TSL 2 BASIC

Gene ACTL6A, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTL6A-201ENST00000392662 MAGI1Q96QZ7 1491 aaPredicted RBP30.44■■■□□ 2.46
ACTL6A-201ENST00000392662 TRIM26Q12899 539 aaPredicted RBP30.4■■■□□ 2.46
ACTL6A-201ENST00000392662 PPARGC1BQ86YN6 1023 aaKnown RBP30.4■■■□□ 2.46
ACTL6A-201ENST00000392662 PCGF6Q9BYE7 350 aa30.4■■■□□ 2.46
ACTL6A-201ENST00000392662 SYNJ2O15056 1496 aa30.32■■■□□ 2.44
ACTL6A-201ENST00000392662 GRIN2AQ12879 1464 aa30.32■■■□□ 2.44
ACTL6A-201ENST00000392662 EFCAB5A4FU69 1503 aa30.31■■■□□ 2.44
ACTL6A-201ENST00000392662 CHMP7Q8WUX9 453 aaPredicted RBP30.29■■■□□ 2.44
ACTL6A-201ENST00000392662 P3H3Q8IVL6 736 aa30.25■■■□□ 2.43
ACTL6A-201ENST00000392662 APLP2Q06481 763 aa30.23■■■□□ 2.43
ACTL6A-201ENST00000392662 IQGAP2Q13576 1575 aa30.22■■■□□ 2.43
ACTL6A-201ENST00000392662 FHOD3Q2V2M9 1422 aa30.21■■■□□ 2.43
ACTL6A-201ENST00000392662 KIAA0586Q9BVV6 1533 aa30.21■■■□□ 2.43
ACTL6A-201ENST00000392662 FBLN2P98095 1184 aa30.21■■■□□ 2.43
ACTL6A-201ENST00000392662 SAMD9Q5K651 1589 aa30.19■■■□□ 2.42
ACTL6A-201ENST00000392662 TTBK1Q5TCY1 1321 aaPredicted RBP30.14■■■□□ 2.42
ACTL6A-201ENST00000392662 NUP160Q12769 1436 aa30.12■■■□□ 2.41
ACTL6A-201ENST00000392662 CEP170Q5SW79 1584 aa30.12■■■□□ 2.41
ACTL6A-201ENST00000392662 UGGT2Q9NYU1 1516 aa30.1■■■□□ 2.41
ACTL6A-201ENST00000392662 FMN1Q68DA7 1419 aa30.07■■■□□ 2.4
ACTL6A-201ENST00000392662 PCF11O94913 1555 aaKnown RBP30.02■■■□□ 2.4
ACTL6A-201ENST00000392662 CASKIN1Q8WXD9 1431 aa30.01■■■□□ 2.4
ACTL6A-201ENST00000392662 KANK4Q5T7N3 995 aaPredicted RBP30■■■□□ 2.39
ACTL6A-201ENST00000392662 MAP3K1Q13233 1512 aa29.99■■■□□ 2.39
ACTL6A-201ENST00000392662 FYCO1Q9BQS8 1478 aa29.99■■■□□ 2.39
ACTL6A-201ENST00000392662 DISP1Q96F81 1524 aa29.97■■■□□ 2.39
ACTL6A-201ENST00000392662 JPH4Q96JJ6 628 aa29.93■■■□□ 2.38
ACTL6A-201ENST00000392662 TIAM1Q13009 1591 aa29.92■■■□□ 2.38
ACTL6A-201ENST00000392662 CHD1O14646 1710 aa29.92■■■□□ 2.38
ACTL6A-201ENST00000392662 KIAA0556O60303 1618 aa29.92■■■□□ 2.38
ACTL6A-201ENST00000392662 ATP1B4Q9UN42 357 aaPredicted RBP29.91■■■□□ 2.38
ACTL6A-201ENST00000392662 LRRC9Q6ZRR7 1453 aa29.82■■■□□ 2.37
ACTL6A-201ENST00000392662 CFAP43Q8NDM7 1665 aa29.82■■■□□ 2.36
ACTL6A-201ENST00000392662 CARMIL2Q6F5E8 1435 aa29.81■■■□□ 2.36
ACTL6A-201ENST00000392662 HECW1Q76N89 1606 aa29.71■■■□□ 2.35
ACTL6A-201ENST00000392662 LRRIQ1Q96JM4 1722 aa29.7■■■□□ 2.35
ACTL6A-201ENST00000392662 PRG4Q92954 1404 aaPredicted RBP29.7■■■□□ 2.35
ACTL6A-201ENST00000392662 CCDC18Q5T9S5 1454 aa29.68■■■□□ 2.34
ACTL6A-201ENST00000392662 SHROOM2Q13796 1616 aa29.66■■■□□ 2.34
ACTL6A-201ENST00000392662 EPRSP07814 1512 aaKnown RBP29.65■■■□□ 2.34
ACTL6A-201ENST00000392662 CLASP1Q7Z460 1538 aa29.63■■■□□ 2.33
ACTL6A-201ENST00000392662 RRBP1Q9P2E9 1410 aaKnown RBP29.62■■■□□ 2.33
ACTL6A-201ENST00000392662 MTUS2Q5JR59 1369 aa29.62■■■□□ 2.33
ACTL6A-201ENST00000392662 RAPGEF6Q8TEU7 1601 aa29.62■■■□□ 2.33
ACTL6A-201ENST00000392662 NUP153P49790 1475 aaKnown RBP29.6■■■□□ 2.33
ACTL6A-201ENST00000392662 PLB1Q6P1J6 1458 aa29.59■■■□□ 2.33
ACTL6A-201ENST00000392662 PHLDB1Q86UU1 1377 aa29.57■■■□□ 2.32
ACTL6A-201ENST00000392662 CDK13Q14004 1512 aaKnown RBP29.56■■■□□ 2.32
ACTL6A-201ENST00000392662 PTPRGP23470 1445 aa29.54■■■□□ 2.32
ACTL6A-201ENST00000392662 CCNB3Q8WWL7 1395 aa29.53■■■□□ 2.32
ACTL6A-201ENST00000392662 ARID3CA6NKF2 412 aa29.53■■■□□ 2.32
ACTL6A-201ENST00000392662 MAGI3Q5TCQ9 1506 aa29.53■■■□□ 2.32
ACTL6A-201ENST00000392662 EHBP1L1Q8N3D4 1523 aa29.52■■■□□ 2.32
ACTL6A-201ENST00000392662 ABCA8O94911 1581 aa29.5■■■□□ 2.31
ACTL6A-201ENST00000392662 HRCP23327 699 aa29.5■■■□□ 2.31
ACTL6A-201ENST00000392662 HNRNPUL2Q1KMD3 747 aaKnown RBP29.49■■■□□ 2.31
ACTL6A-201ENST00000392662 ERCC6L2Q5T890 1561 aa29.48■■■□□ 2.31
ACTL6A-201ENST00000392662 NCOA2Q15596 1464 aa29.44■■■□□ 2.3
ACTL6A-201ENST00000392662 SUPT6HQ7KZ85 1726 aaKnown RBP29.42■■■□□ 2.3
ACTL6A-201ENST00000392662 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.41■■■□□ 2.3
ACTL6A-201ENST00000392662 OSCARQ8IYS5 282 aa29.41■■■□□ 2.3
ACTL6A-201ENST00000392662 CDK11AQ9UQ88 783 aaPredicted RBP29.4■■■□□ 2.3
ACTL6A-201ENST00000392662 ARHGEF11O15085 1522 aa29.4■■■□□ 2.3
ACTL6A-201ENST00000392662 UACAQ9BZF9 1416 aa29.36■■■□□ 2.29
ACTL6A-201ENST00000392662 FGD6Q6ZV73 1430 aa29.34■■■□□ 2.29
ACTL6A-201ENST00000392662 ATP10BO94823 1461 aa29.34■■■□□ 2.29
ACTL6A-201ENST00000392662 MYOM3Q5VTT5 1437 aa29.34■■■□□ 2.29
ACTL6A-201ENST00000392662 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.32■■■□□ 2.288e-6■■□□□ 11.9
ACTL6A-201ENST00000392662 FAM50AQ14320 339 aaKnown RBP29.31■■■□□ 2.28
ACTL6A-201ENST00000392662 TROQ12816 1431 aaPredicted RBP29.3■■■□□ 2.28
ACTL6A-201ENST00000392662 ITGAEP38570 1179 aa29.25■■■□□ 2.27
ACTL6A-201ENST00000392662 PLEKHD1A6NEE1 506 aa29.24■■■□□ 2.27
ACTL6A-201ENST00000392662 ABCC2Q92887 1545 aa29.24■■■□□ 2.27
ACTL6A-201ENST00000392662 CCER1Q8TC90 406 aaPredicted RBP29.19■■■□□ 2.26
ACTL6A-201ENST00000392662 UHRF1BP1LA0JNW5 1464 aa29.18■■■□□ 2.26
ACTL6A-201ENST00000392662 MIA2Q96PC5 1412 aa29.18■■■□□ 2.26
ACTL6A-201ENST00000392662 ADCY10Q96PN6 1610 aa29.16■■■□□ 2.26
ACTL6A-201ENST00000392662 ZEB1P37275 1124 aaPredicted RBP29.15■■■□□ 2.26
ACTL6A-201ENST00000392662 PTPN23Q9H3S7 1636 aa29.15■■■□□ 2.26
ACTL6A-201ENST00000392662 TCOF1Q13428 1488 aaKnown RBP29.14■■■□□ 2.25
ACTL6A-201ENST00000392662 KIF14Q15058 1648 aa29.13■■■□□ 2.25
ACTL6A-201ENST00000392662 KDM5BQ9UGL1 1544 aa29.07■■■□□ 2.24
ACTL6A-201ENST00000392662 GPATCH8Q9UKJ3 1502 aaKnown RBP29.06■■■□□ 2.24
ACTL6A-201ENST00000392662 ABCC10Q5T3U5 1492 aa29.05■■■□□ 2.24
ACTL6A-201ENST00000392662 PTPRKQ15262 1439 aa29.04■■■□□ 2.24
ACTL6A-201ENST00000392662 SETD5Q9C0A6 1442 aa29■■■□□ 2.23
ACTL6A-201ENST00000392662 ZCCHC11Q5TAX3 1644 aaKnown RBP29■■■□□ 2.23
ACTL6A-201ENST00000392662 CFDP1Q9UEE9 299 aaPredicted RBP29■■■□□ 2.23
ACTL6A-201ENST00000392662 ITSN2Q9NZM3 1697 aa28.98■■■□□ 2.23
ACTL6A-201ENST00000392662 ZNF644Q9H582 1327 aaPredicted RBP28.97■■■□□ 2.23
ACTL6A-201ENST00000392662 RAB3GAP2Q9H2M9 1393 aa28.97■■■□□ 2.23
ACTL6A-201ENST00000392662 CDC42BPAQ5VT25 1732 aa28.92■■■□□ 2.22
ACTL6A-201ENST00000392662 CAMSAP2Q08AD1 1489 aa28.9■■■□□ 2.22
ACTL6A-201ENST00000392662 HFM1A2PYH4 1435 aa28.89■■■□□ 2.22
ACTL6A-201ENST00000392662 DHX57Q6P158 1386 aaKnown RBP28.89■■■□□ 2.22
ACTL6A-201ENST00000392662 ZNF777Q9ULD5 760 aaPredicted RBP28.87■■■□□ 2.21
ACTL6A-201ENST00000392662 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.87■■■□□ 2.21
ACTL6A-201ENST00000392662 KCNH8Q96L42 1107 aa28.87■■■□□ 2.21
ACTL6A-201ENST00000392662 DAPK1P53355 1430 aa28.86■■■□□ 2.21
ACTL6A-201ENST00000392662 ABCC5O15440 1437 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms