RNA–Protein interactions for RNA: ENST00000391976.6

HDLBP-204, Transcript of high density lipoprotein binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HDLBP, Length 4,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-204ENST00000391976 FGD5Q6ZNL6 1462 aa18.78■□□□□ 0.6
HDLBP-204ENST00000391976 MIER1Q8N108 512 aa18.77■□□□□ 0.6
HDLBP-204ENST00000391976 KIF21BO75037 1637 aa18.75■□□□□ 0.59
HDLBP-204ENST00000391976 TOP2BQ02880 1626 aa18.75■□□□□ 0.59
HDLBP-204ENST00000391976 CUX1P39880 1505 aa18.74■□□□□ 0.59
HDLBP-204ENST00000391976 RRP7BPQ9NSQ0 103 aa18.72■□□□□ 0.59
HDLBP-204ENST00000391976 TONSLQ96HA7 1378 aa18.72■□□□□ 0.59
HDLBP-204ENST00000391976 RAD54L2Q9Y4B4 1467 aa18.72■□□□□ 0.59
HDLBP-204ENST00000391976 FHOD3Q2V2M9 1422 aa18.7■□□□□ 0.58
HDLBP-204ENST00000391976 BCANQ96GW7 911 aa18.7■□□□□ 0.58
HDLBP-204ENST00000391976 CC2D2AQ9P2K1 1620 aa18.69■□□□□ 0.58
HDLBP-204ENST00000391976 HIRIP3Q9BW71 556 aaPredicted RBP18.68■□□□□ 0.58
HDLBP-204ENST00000391976 DDX10Q13206 875 aaKnown RBP18.68■□□□□ 0.58
HDLBP-204ENST00000391976 ERCC6Q03468 1493 aa18.67■□□□□ 0.58
HDLBP-204ENST00000391976 SIN3AQ96ST3 1273 aa18.67■□□□□ 0.58
HDLBP-204ENST00000391976 NESP48681 1621 aa18.67■□□□□ 0.58
HDLBP-204ENST00000391976 PRXQ9BXM0 1461 aa18.65■□□□□ 0.58
HDLBP-204ENST00000391976 ANP32CO43423 234 aa18.65■□□□□ 0.58
HDLBP-204ENST00000391976 SCAF1Q9H7N4 1312 aaKnown RBP18.64■□□□□ 0.58
HDLBP-204ENST00000391976 CLSPNQ9HAW4 1339 aa18.62■□□□□ 0.57
HDLBP-204ENST00000391976 ARAP1Q96P48 1450 aa18.61■□□□□ 0.57
HDLBP-204ENST00000391976 ERICH3Q5RHP9 1530 aa18.6■□□□□ 0.57
HDLBP-204ENST00000391976 DNAJC5BQ9UF47 199 aa18.57■□□□□ 0.56
HDLBP-204ENST00000391976 RAB3GAP2Q9H2M9 1393 aa18.57■□□□□ 0.56
HDLBP-204ENST00000391976 ARHGAP35Q9NRY4 1499 aa18.56■□□□□ 0.56
HDLBP-204ENST00000391976 FMN1Q68DA7 1419 aa18.56■□□□□ 0.56
HDLBP-204ENST00000391976 SETD5Q9C0A6 1442 aa18.55■□□□□ 0.56
HDLBP-204ENST00000391976 DHX57Q6P158 1386 aaKnown RBP18.5■□□□□ 0.55
HDLBP-204ENST00000391976 GAPVD1Q14C86 1478 aa18.5■□□□□ 0.55
HDLBP-204ENST00000391976 PLEKHD1A6NEE1 506 aa18.48■□□□□ 0.55
HDLBP-204ENST00000391976 CFDP1Q9UEE9 299 aaPredicted RBP18.48■□□□□ 0.55
HDLBP-204ENST00000391976 TOPBP1Q92547 1522 aa18.47■□□□□ 0.55
HDLBP-204ENST00000391976 POLA1P09884 1462 aaPredicted RBP18.47■□□□□ 0.55
HDLBP-204ENST00000391976 TSPY4P0CV99 314 aa18.45■□□□□ 0.54
HDLBP-204ENST00000391976 TSPY10P0CW01 314 aa18.45■□□□□ 0.54
HDLBP-204ENST00000391976 BIVM-ERCC5R4GMW8 1640 aa18.43■□□□□ 0.54
HDLBP-204ENST00000391976 BCL11AQ9H165 835 aa18.41■□□□□ 0.54
HDLBP-204ENST00000391976 PHLDB1Q86UU1 1377 aa18.4■□□□□ 0.54
HDLBP-204ENST00000391976 AQRO60306 1485 aaKnown RBP eCLIP18.4■□□□□ 0.543e-7■■■■■ 31.9
HDLBP-204ENST00000391976 KCNH8Q96L42 1107 aa18.39■□□□□ 0.53
HDLBP-204ENST00000391976 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.39■□□□□ 0.533e-10■■□□□ 13.2
HDLBP-204ENST00000391976 LRRC9Q6ZRR7 1453 aa18.36■□□□□ 0.53
HDLBP-204ENST00000391976 DNMBPQ6XZF7 1577 aa18.36■□□□□ 0.53
HDLBP-204ENST00000391976 DAXXQ9UER7 740 aaPredicted RBP18.35■□□□□ 0.53
HDLBP-204ENST00000391976 KDM2AQ9Y2K7 1162 aa18.33■□□□□ 0.53
HDLBP-204ENST00000391976 EIF4G2P78344 907 aaKnown RBP eCLIP18.33■□□□□ 0.52
HDLBP-204ENST00000391976 FOXD1Q16676 465 aa18.32■□□□□ 0.52
HDLBP-204ENST00000391976 MYT1Q01538 1121 aa18.31■□□□□ 0.52
HDLBP-204ENST00000391976 RRBP1Q9P2E9 1410 aaKnown RBP18.31■□□□□ 0.52
HDLBP-204ENST00000391976 PLPPR3Q6T4P5 718 aa18.31■□□□□ 0.52
HDLBP-204ENST00000391976 ABCA10Q8WWZ4 1543 aa18.29■□□□□ 0.52
HDLBP-204ENST00000391976 SENP3Q9H4L4 574 aaPredicted RBP18.29■□□□□ 0.52
HDLBP-204ENST00000391976 TIMELESSQ9UNS1 1208 aa18.29■□□□□ 0.52
HDLBP-204ENST00000391976 JPH4Q96JJ6 628 aa18.28■□□□□ 0.52
HDLBP-204ENST00000391976 CASKIN1Q8WXD9 1431 aa18.28■□□□□ 0.52
HDLBP-204ENST00000391976 HNRNPUQ00839 825 aaKnown RBP eCLIP18.27■□□□□ 0.521e-6■□□□□ 8.9
HDLBP-204ENST00000391976 CARMIL2Q6F5E8 1435 aa18.26■□□□□ 0.51
HDLBP-204ENST00000391976 PPP1R15AO75807 674 aaPredicted RBP18.25■□□□□ 0.51
HDLBP-204ENST00000391976 FAM9BQ8IZU0 186 aa18.24■□□□□ 0.51
HDLBP-204ENST00000391976 FGD6Q6ZV73 1430 aa18.23■□□□□ 0.51
HDLBP-204ENST00000391976 SALL2Q9Y467 1007 aaPredicted RBP18.23■□□□□ 0.51
HDLBP-204ENST00000391976 LAMC3Q9Y6N6 1575 aa18.23■□□□□ 0.51
HDLBP-204ENST00000391976 TIAM1Q13009 1591 aa18.22■□□□□ 0.51
HDLBP-204ENST00000391976 URB2Q14146 1524 aaKnown RBP18.22■□□□□ 0.51
HDLBP-204ENST00000391976 FKBP8Q14318 412 aa18.22■□□□□ 0.51
HDLBP-204ENST00000391976 MPHOSPH9Q99550 1183 aa18.22■□□□□ 0.51
HDLBP-204ENST00000391976 FYCO1Q9BQS8 1478 aa18.21■□□□□ 0.51
HDLBP-204ENST00000391976 SENP3-EIF4A1A0A087X0R7 540 aa18.2■□□□□ 0.5
HDLBP-204ENST00000391976 CHGAP10645 457 aaKnown RBP18.19■□□□□ 0.5
HDLBP-204ENST00000391976 GRIN2BQ13224 1484 aa18.19■□□□□ 0.5
HDLBP-204ENST00000391976 RGL3Q3MIN7 710 aa18.18■□□□□ 0.5
HDLBP-204ENST00000391976 CCDC18Q5T9S5 1454 aa18.18■□□□□ 0.5
HDLBP-204ENST00000391976 MRC2Q9UBG0 1479 aa18.18■□□□□ 0.5
HDLBP-204ENST00000391976 NPM1P06748 294 aaKnown RBP eCLIP18.17■□□□□ 0.5
HDLBP-204ENST00000391976 EFCAB5A4FU69 1503 aa18.17■□□□□ 0.5
HDLBP-204ENST00000391976 SLC24A1O60721 1099 aa18.16■□□□□ 0.5
HDLBP-204ENST00000391976 MYOM3Q5VTT5 1437 aa18.16■□□□□ 0.5
HDLBP-204ENST00000391976 MRS2Q9HD23 443 aa18.15■□□□□ 0.5
HDLBP-204ENST00000391976 NCOA2Q15596 1464 aa18.15■□□□□ 0.5
HDLBP-204ENST00000391976 ZNF644Q9H582 1327 aaPredicted RBP18.13■□□□□ 0.49
HDLBP-204ENST00000391976 HSPA5P11021 654 aaKnown RBP18.12■□□□□ 0.49
HDLBP-204ENST00000391976 PCF11O94913 1555 aaKnown RBP18.12■□□□□ 0.49
HDLBP-204ENST00000391976 PKD2Q13563 968 aa18.12■□□□□ 0.49
HDLBP-204ENST00000391976 L3MBTL2Q969R5 705 aa18.1■□□□□ 0.49
HDLBP-204ENST00000391976 HNRNPMP52272 730 aaKnown RBP eCLIP18.08■□□□□ 0.483e-7■■■■■ 30.7
HDLBP-204ENST00000391976 IFT140Q96RY7 1462 aa18.07■□□□□ 0.48
HDLBP-204ENST00000391976 CARD11Q9BXL7 1154 aa18.07■□□□□ 0.48
HDLBP-204ENST00000391976 CUL7Q14999 1698 aa18.07■□□□□ 0.48
HDLBP-204ENST00000391976 PRDM2Q13029 1718 aa18.04■□□□□ 0.48
HDLBP-204ENST00000391976 TMC1Q8TDI8 760 aa18.04■□□□□ 0.48
HDLBP-204ENST00000391976 ANKRD30AQ9BXX3 1397 aa18.04■□□□□ 0.48
HDLBP-204ENST00000391976 SNAPC4Q5SXM2 1469 aa18.03■□□□□ 0.48
HDLBP-204ENST00000391976 NUP155O75694 1391 aa18.03■□□□□ 0.48
HDLBP-204ENST00000391976 DCAF11Q8TEB1 546 aa18.03■□□□□ 0.48
HDLBP-204ENST00000391976 IRX6P78412 446 aaPredicted RBP18.02■□□□□ 0.48
HDLBP-204ENST00000391976 PTPRGP23470 1445 aa18.01■□□□□ 0.47
HDLBP-204ENST00000391976 UACAQ9BZF9 1416 aa18.01■□□□□ 0.47
HDLBP-204ENST00000391976 MAP3K1Q13233 1512 aa18■□□□□ 0.47
HDLBP-204ENST00000391976 ZNF608Q9ULD9 1512 aaPredicted RBP17.99■□□□□ 0.47
HDLBP-204ENST00000391976 CDK13Q14004 1512 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms