RNA–Protein interactions for RNA: ENST00000391976.6

HDLBP-204, Transcript of high density lipoprotein binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HDLBP, Length 4,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-204ENST00000391976 NISCHQ9Y2I1 1504 aa25.88■■□□□ 1.73
HDLBP-204ENST00000391976 DCAF8L2P0C7V8 631 aa23.68■■□□□ 1.38
HDLBP-204ENST00000391976 SHROOM4Q9ULL8 1493 aa23.2■■□□□ 1.3
HDLBP-204ENST00000391976 SUPT5HO00267 1087 aaKnown RBP22.97■■□□□ 1.27
HDLBP-204ENST00000391976 EHMT2Q96KQ7 1210 aa21.94■■□□□ 1.1
HDLBP-204ENST00000391976 ZCCHC6Q5VYS8 1495 aaKnown RBP21.65■■□□□ 1.06
HDLBP-204ENST00000391976 CCDC180Q9P1Z9 1646 aa21.64■■□□□ 1.05
HDLBP-204ENST00000391976 ABCC9O60706 1549 aa21.46■■□□□ 1.03
HDLBP-204ENST00000391976 FAM9AQ8IZU1 332 aaPredicted RBP21.44■■□□□ 1.02
HDLBP-204ENST00000391976 CHIC1Q5VXU3 224 aa21.4■■□□□ 1.02
HDLBP-204ENST00000391976 TRIM41Q8WV44 630 aa21.29■■□□□ 1
HDLBP-204ENST00000391976 PCGF6Q9BYE7 350 aa21.19■□□□□ 0.98
HDLBP-204ENST00000391976 TTBK1Q5TCY1 1321 aaPredicted RBP21.08■□□□□ 0.96
HDLBP-204ENST00000391976 LOC105371045A0A1W2PR82 267 aa21.07■□□□□ 0.96
HDLBP-204ENST00000391976 SCRIBQ14160 1630 aa21■□□□□ 0.95
HDLBP-204ENST00000391976 PABPN1Q86U42 306 aaKnown RBP eCLIP20.88■□□□□ 0.935e-8■■□□□ 12.5
HDLBP-204ENST00000391976 RANGAP1P46060 587 aaPredicted RBP20.82■□□□□ 0.92
HDLBP-204ENST00000391976 DCAF1Q9Y4B6 1507 aa20.8■□□□□ 0.92
HDLBP-204ENST00000391976 PPARGC1BQ86YN6 1023 aaKnown RBP20.65■□□□□ 0.9
HDLBP-204ENST00000391976 UBTFP17480 764 aaKnown RBP20.63■□□□□ 0.89
HDLBP-204ENST00000391976 RSF1Q96T23 1441 aaPredicted RBP20.57■□□□□ 0.88
HDLBP-204ENST00000391976 TRIM26Q12899 539 aaPredicted RBP20.55■□□□□ 0.88
HDLBP-204ENST00000391976 MYO15BQ96JP2 1530 aa20.55■□□□□ 0.88
HDLBP-204ENST00000391976 APLP2Q06481 763 aa20.53■□□□□ 0.88
HDLBP-204ENST00000391976 NACADO15069 1562 aa20.52■□□□□ 0.88
HDLBP-204ENST00000391976 HRCP23327 699 aa20.49■□□□□ 0.87
HDLBP-204ENST00000391976 RB1CC1Q8TDY2 1594 aa20.44■□□□□ 0.86
HDLBP-204ENST00000391976 CECR2Q9BXF3 1484 aa20.36■□□□□ 0.85
HDLBP-204ENST00000391976 ATP1B4Q9UN42 357 aaPredicted RBP20.3■□□□□ 0.84
HDLBP-204ENST00000391976 CCER1Q8TC90 406 aaPredicted RBP20.3■□□□□ 0.84
HDLBP-204ENST00000391976 ZEB1P37275 1124 aaPredicted RBP20.28■□□□□ 0.84
HDLBP-204ENST00000391976 MROH2BQ7Z745 1585 aa20.14■□□□□ 0.82
HDLBP-204ENST00000391976 CSRNP3Q8WYN3 585 aa20.06■□□□□ 0.8
HDLBP-204ENST00000391976 BAZ1AQ9NRL2 1556 aaPredicted RBP20.05■□□□□ 0.8
HDLBP-204ENST00000391976 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.98■□□□□ 0.79
HDLBP-204ENST00000391976 HNRNPUL2Q1KMD3 747 aaKnown RBP19.94■□□□□ 0.78
HDLBP-204ENST00000391976 WIZO95785 1651 aa19.93■□□□□ 0.78
HDLBP-204ENST00000391976 ITGAEP38570 1179 aa19.8■□□□□ 0.76
HDLBP-204ENST00000391976 YTHDC1Q96MU7 727 aaKnown RBP19.8■□□□□ 0.76
HDLBP-204ENST00000391976 CCDC88BA6NC98 1476 aa19.78■□□□□ 0.76
HDLBP-204ENST00000391976 BAZ1BQ9UIG0 1483 aaKnown RBP19.77■□□□□ 0.76
HDLBP-204ENST00000391976 WRNQ14191 1432 aaPredicted RBP eCLIP19.72■□□□□ 0.75
HDLBP-204ENST00000391976 ABCC8Q09428 1581 aa19.7■□□□□ 0.74
HDLBP-204ENST00000391976 TOP2AP11388 1531 aaKnown RBP19.66■□□□□ 0.74
HDLBP-204ENST00000391976 SMARCA4P51532 1647 aa19.65■□□□□ 0.74
HDLBP-204ENST00000391976 SOGA1O94964 1423 aa19.64■□□□□ 0.73
HDLBP-204ENST00000391976 CEP162Q5TB80 1403 aa19.6■□□□□ 0.73
HDLBP-204ENST00000391976 EEA1Q15075 1411 aa19.58■□□□□ 0.72
HDLBP-204ENST00000391976 PELP1Q8IZL8 1130 aaKnown RBP19.57■□□□□ 0.72
HDLBP-204ENST00000391976 P3H3Q8IVL6 736 aa19.53■□□□□ 0.72
HDLBP-204ENST00000391976 GOLGA3Q08378 1498 aa19.52■□□□□ 0.71
HDLBP-204ENST00000391976 CNGB1Q14028 1251 aaPredicted RBP19.51■□□□□ 0.71
HDLBP-204ENST00000391976 CENPBP07199 599 aaPredicted RBP19.51■□□□□ 0.71
HDLBP-204ENST00000391976 TNIKQ9UKE5 1360 aa19.5■□□□□ 0.71
HDLBP-204ENST00000391976 CLIP1P30622 1438 aa19.49■□□□□ 0.71
HDLBP-204ENST00000391976 ATAD2BQ9ULI0 1458 aa19.47■□□□□ 0.71
HDLBP-204ENST00000391976 SMARCA2P51531 1590 aa19.46■□□□□ 0.71
HDLBP-204ENST00000391976 FAM50AQ14320 339 aaKnown RBP19.44■□□□□ 0.7
HDLBP-204ENST00000391976 DIEXFQ68CQ4 756 aaKnown RBP19.42■□□□□ 0.7
HDLBP-204ENST00000391976 CEP164Q9UPV0 1460 aa19.39■□□□□ 0.7
HDLBP-204ENST00000391976 POLR3GLQ9BT43 218 aa19.36■□□□□ 0.69
HDLBP-204ENST00000391976 RUSC2Q8N2Y8 1516 aa19.35■□□□□ 0.69
HDLBP-204ENST00000391976 KIF27Q86VH2 1401 aa19.3■□□□□ 0.68
HDLBP-204ENST00000391976 MYT1LQ9UL68 1186 aa19.28■□□□□ 0.68
HDLBP-204ENST00000391976 ARID3CA6NKF2 412 aa19.22■□□□□ 0.67
HDLBP-204ENST00000391976 ZNF316A6NFI3 1004 aaPredicted RBP19.21■□□□□ 0.67
HDLBP-204ENST00000391976 BICRAQ9NZM4 1560 aa19.21■□□□□ 0.67
HDLBP-204ENST00000391976 FBLN2P98095 1184 aa19.19■□□□□ 0.66
HDLBP-204ENST00000391976 NEUROD1Q13562 356 aa19.19■□□□□ 0.66
HDLBP-204ENST00000391976 CUX2O14529 1486 aa19.14■□□□□ 0.66
HDLBP-204ENST00000391976 UNC13AQ9UPW8 1703 aa19.12■□□□□ 0.65
HDLBP-204ENST00000391976 RAPGEF2Q9Y4G8 1499 aa19.11■□□□□ 0.65
HDLBP-204ENST00000391976 VPS8Q8N3P4 1428 aa19.08■□□□□ 0.65
HDLBP-204ENST00000391976 NEFLP07196 543 aa19.07■□□□□ 0.64
HDLBP-204ENST00000391976 CADPSQ9ULU8 1353 aa19.07■□□□□ 0.64
HDLBP-204ENST00000391976 EIF4G1Q04637 1599 aaKnown RBP19.06■□□□□ 0.64
HDLBP-204ENST00000391976 CARMIL1Q5VZK9 1371 aa19.06■□□□□ 0.64
HDLBP-204ENST00000391976 TRIM52Q96A61 297 aa19.05■□□□□ 0.64
HDLBP-204ENST00000391976 NCAPD3P42695 1498 aa19.04■□□□□ 0.64
HDLBP-204ENST00000391976 ERICH6Q7L0X2 663 aa19.04■□□□□ 0.64
HDLBP-204ENST00000391976 KANK4Q5T7N3 995 aaPredicted RBP19■□□□□ 0.63
HDLBP-204ENST00000391976 SYNJ1O43426 1573 aa18.99■□□□□ 0.63
HDLBP-204ENST00000391976 MTUS2Q5JR59 1369 aa18.93■□□□□ 0.62
HDLBP-204ENST00000391976 TDRD9Q8NDG6 1382 aaKnown RBP18.88■□□□□ 0.61
HDLBP-204ENST00000391976 CHIC2Q9UKJ5 165 aa18.87■□□□□ 0.61
HDLBP-204ENST00000391976 GTF3C3Q9Y5Q9 886 aa18.86■□□□□ 0.61
HDLBP-204ENST00000391976 ACIN1Q9UKV3 1341 aaKnown RBP18.85■□□□□ 0.61
HDLBP-204ENST00000391976 FANCD2Q9BXW9 1451 aa18.85■□□□□ 0.61
HDLBP-204ENST00000391976 ZNF777Q9ULD5 760 aaPredicted RBP18.84■□□□□ 0.61
HDLBP-204ENST00000391976 PEG3Q9GZU2 1588 aa18.83■□□□□ 0.61
HDLBP-204ENST00000391976 SLC4A1APQ9BWU0 796 aaKnown RBP18.82■□□□□ 0.6
HDLBP-204ENST00000391976 CCNB3Q8WWL7 1395 aa18.82■□□□□ 0.6
HDLBP-204ENST00000391976 CFTRP13569 1480 aa18.82■□□□□ 0.6
HDLBP-204ENST00000391976 ZNF326Q5BKZ1 582 aaKnown RBP18.82■□□□□ 0.6
HDLBP-204ENST00000391976 CHMP7Q8WUX9 453 aaPredicted RBP18.81■□□□□ 0.6
HDLBP-204ENST00000391976 CDK11AQ9UQ88 783 aaPredicted RBP18.8■□□□□ 0.6
HDLBP-204ENST00000391976 HMGXB3Q12766 1538 aa18.8■□□□□ 0.6
HDLBP-204ENST00000391976 PDS5BQ9NTI5 1447 aa18.79■□□□□ 0.6
HDLBP-204ENST00000391976 FHAD1B1AJZ9 1412 aa18.78■□□□□ 0.6
HDLBP-204ENST00000391976 IGF1RP08069 1367 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms