RNA–Protein interactions for RNA: ENST00000390457.2

TRAV27-201, Transcript of T cell receptor alpha variable 27, humanhuman

APPRIS P1 BASIC

Gene TRAV27, Length 425 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27-201ENST00000390457 TOP2BQ02880 1626 aa12.72□□□□□ -0.37
TRAV27-201ENST00000390457 ADAMTS12P58397 1594 aa12.72□□□□□ -0.37
TRAV27-201ENST00000390457 CEP170Q5SW79 1584 aa12.72□□□□□ -0.37
TRAV27-201ENST00000390457 BIVM-ERCC5R4GMW8 1640 aa12.71□□□□□ -0.37
TRAV27-201ENST00000390457 FHAD1B1AJZ9 1412 aa12.71□□□□□ -0.38
TRAV27-201ENST00000390457 SHROOM2Q13796 1616 aa12.7□□□□□ -0.38
TRAV27-201ENST00000390457 ERICH3Q5RHP9 1530 aa12.67□□□□□ -0.38
TRAV27-201ENST00000390457 JPH4Q96JJ6 628 aa12.61□□□□□ -0.39
TRAV27-201ENST00000390457 PRG4Q92954 1404 aaPredicted RBP12.61□□□□□ -0.39
TRAV27-201ENST00000390457 KIF13AQ9H1H9 1805 aa12.57□□□□□ -0.4
TRAV27-201ENST00000390457 RUSC2Q8N2Y8 1516 aa12.54□□□□□ -0.4
TRAV27-201ENST00000390457 IGF1RP08069 1367 aa12.53□□□□□ -0.4
TRAV27-201ENST00000390457 ABCC10Q5T3U5 1492 aa12.52□□□□□ -0.41
TRAV27-201ENST00000390457 MAPKBP1O60336 1514 aa12.5□□□□□ -0.41
TRAV27-201ENST00000390457 KIAA0586Q9BVV6 1533 aa12.5□□□□□ -0.41
TRAV27-201ENST00000390457 FAM69CQ0P6D2 419 aa12.48□□□□□ -0.41
TRAV27-201ENST00000390457 ADCY10Q96PN6 1610 aa12.48□□□□□ -0.41
TRAV27-201ENST00000390457 DIP2BQ9P265 1576 aa12.46□□□□□ -0.42
TRAV27-201ENST00000390457 KIF27Q86VH2 1401 aa12.45□□□□□ -0.42
TRAV27-201ENST00000390457 NPM1P06748 294 aaKnown RBP eCLIP12.44□□□□□ -0.42
TRAV27-201ENST00000390457 CUL7Q14999 1698 aa12.43□□□□□ -0.42
TRAV27-201ENST00000390457 CARMIL1Q5VZK9 1371 aa12.4□□□□□ -0.42
TRAV27-201ENST00000390457 PTPRGP23470 1445 aa12.39□□□□□ -0.43
TRAV27-201ENST00000390457 TNIKQ9UKE5 1360 aa12.36□□□□□ -0.43
TRAV27-201ENST00000390457 KDM4FA0A1W2PPD8 638 aa12.36□□□□□ -0.43
TRAV27-201ENST00000390457 ABCC2Q92887 1545 aa12.35□□□□□ -0.43
TRAV27-201ENST00000390457 KDM6BO15054 1643 aa12.34□□□□□ -0.43
TRAV27-201ENST00000390457 CARMIL2Q6F5E8 1435 aa12.34□□□□□ -0.43
TRAV27-201ENST00000390457 TSPOAP1O95153 1857 aa12.33□□□□□ -0.44
TRAV27-201ENST00000390457 UHRF1BP1LA0JNW5 1464 aa12.33□□□□□ -0.44
TRAV27-201ENST00000390457 DISP1Q96F81 1524 aa12.32□□□□□ -0.44
TRAV27-201ENST00000390457 IQGAP2Q13576 1575 aa12.32□□□□□ -0.44
TRAV27-201ENST00000390457 GLI2P10070 1586 aa12.31□□□□□ -0.44
TRAV27-201ENST00000390457 ASXL2Q76L83 1435 aa12.31□□□□□ -0.44
TRAV27-201ENST00000390457 PLB1Q6P1J6 1458 aa12.31□□□□□ -0.44
TRAV27-201ENST00000390457 PPRC1Q5VV67 1664 aaKnown RBP12.3□□□□□ -0.44
TRAV27-201ENST00000390457 UACAQ9BZF9 1416 aa12.29□□□□□ -0.44
TRAV27-201ENST00000390457 KDM5BQ9UGL1 1544 aa12.28□□□□□ -0.44
TRAV27-201ENST00000390457 TTBK1Q5TCY1 1321 aaPredicted RBP12.28□□□□□ -0.44
TRAV27-201ENST00000390457 UGGT2Q9NYU1 1516 aa12.27□□□□□ -0.44
TRAV27-201ENST00000390457 COL17A1Q9UMD9 1497 aaPredicted RBP12.27□□□□□ -0.45
TRAV27-201ENST00000390457 RAPGEF2Q9Y4G8 1499 aa12.26□□□□□ -0.45
TRAV27-201ENST00000390457 EPRSP07814 1512 aaKnown RBP12.25□□□□□ -0.45
TRAV27-201ENST00000390457 KIAA0556O60303 1618 aa12.22□□□□□ -0.45
TRAV27-201ENST00000390457 MAP3K4Q9Y6R4 1608 aa12.22□□□□□ -0.45
TRAV27-201ENST00000390457 ZCCHC11Q5TAX3 1644 aaKnown RBP12.2□□□□□ -0.46
TRAV27-201ENST00000390457 ADGRL1O94910 1474 aa12.17□□□□□ -0.46
TRAV27-201ENST00000390457 TEX14Q8IWB6 1497 aa12.17□□□□□ -0.46
TRAV27-201ENST00000390457 WDR7Q9Y4E6 1490 aa12.16□□□□□ -0.46
TRAV27-201ENST00000390457 PRXQ9BXM0 1461 aa12.14□□□□□ -0.47
TRAV27-201ENST00000390457 ABCA8O94911 1581 aa12.14□□□□□ -0.47
TRAV27-201ENST00000390457 MAGI3Q5TCQ9 1506 aa12.13□□□□□ -0.47
TRAV27-201ENST00000390457 CACNB1Q02641 598 aaPredicted RBP12.13□□□□□ -0.47
TRAV27-201ENST00000390457 DMRT2Q9Y5R5 561 aa12.13□□□□□ -0.47
TRAV27-201ENST00000390457 GOLGA3Q08378 1498 aa12.12□□□□□ -0.47
TRAV27-201ENST00000390457 CTTNBP2Q8WZ74 1663 aa12.12□□□□□ -0.47
TRAV27-201ENST00000390457 CD109Q6YHK3 1445 aa12.11□□□□□ -0.47
TRAV27-201ENST00000390457 ILDR1Q86SU0 546 aaPredicted RBP12.09□□□□□ -0.47
TRAV27-201ENST00000390457 CFAP43Q8NDM7 1665 aa12.09□□□□□ -0.47
TRAV27-201ENST00000390457 KCNH8Q96L42 1107 aa12.07□□□□□ -0.48
TRAV27-201ENST00000390457 ATP10BO94823 1461 aa12.05□□□□□ -0.48
TRAV27-201ENST00000390457 HECW2Q9P2P5 1572 aa12.05□□□□□ -0.48
TRAV27-201ENST00000390457 ARAP3Q8WWN8 1544 aa12.04□□□□□ -0.48
TRAV27-201ENST00000390457 MAPK8IP2Q13387 824 aaPredicted RBP12.01□□□□□ -0.49
TRAV27-201ENST00000390457 P3H3Q8IVL6 736 aa12□□□□□ -0.49
TRAV27-201ENST00000390457 PHLDB1Q86UU1 1377 aa12□□□□□ -0.49
TRAV27-201ENST00000390457 SAMD9Q5K651 1589 aa12□□□□□ -0.49
TRAV27-201ENST00000390457 ABCA9Q8IUA7 1624 aa12□□□□□ -0.49
TRAV27-201ENST00000390457 CSRNP3Q8WYN3 585 aa11.98□□□□□ -0.49
TRAV27-201ENST00000390457 KIF21BO75037 1637 aa11.97□□□□□ -0.49
TRAV27-201ENST00000390457 ARID3CA6NKF2 412 aa11.97□□□□□ -0.49
TRAV27-201ENST00000390457 SCAF1Q9H7N4 1312 aaKnown RBP11.96□□□□□ -0.49
TRAV27-201ENST00000390457 NEO1Q92859 1461 aa11.95□□□□□ -0.5
TRAV27-201ENST00000390457 RAPGEF3O95398 923 aa11.95□□□□□ -0.5
TRAV27-201ENST00000390457 NUP153P49790 1475 aaKnown RBP11.95□□□□□ -0.5
TRAV27-201ENST00000390457 ADAMTSL3P82987 1691 aa11.94□□□□□ -0.5
TRAV27-201ENST00000390457 RAPGEF6Q8TEU7 1601 aa11.94□□□□□ -0.5
TRAV27-201ENST00000390457 FAM9AQ8IZU1 332 aaPredicted RBP11.93□□□□□ -0.5
TRAV27-201ENST00000390457 FRMPD1Q5SYB0 1578 aa11.92□□□□□ -0.5
TRAV27-201ENST00000390457 PTPRMP28827 1452 aa11.91□□□□□ -0.5
TRAV27-201ENST00000390457 EEA1Q15075 1411 aa11.89□□□□□ -0.51
TRAV27-201ENST00000390457 FHOD3Q2V2M9 1422 aa11.89□□□□□ -0.51
TRAV27-201ENST00000390457 BCORL1Q5H9F3 1711 aa11.88□□□□□ -0.51
TRAV27-201ENST00000390457 PLEKHD1A6NEE1 506 aa11.86□□□□□ -0.51
TRAV27-201ENST00000390457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.86□□□□□ -0.51
TRAV27-201ENST00000390457 HNRNPUL2Q1KMD3 747 aaKnown RBP11.86□□□□□ -0.51
TRAV27-201ENST00000390457 AKNAQ7Z591 1439 aa11.86□□□□□ -0.51
TRAV27-201ENST00000390457 DENND4BO75064 1496 aaPredicted RBP11.85□□□□□ -0.51
TRAV27-201ENST00000390457 RICTORQ6R327 1708 aa11.85□□□□□ -0.51
TRAV27-201ENST00000390457 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.85□□□□□ -0.51
TRAV27-201ENST00000390457 MADDQ8WXG6 1647 aa11.84□□□□□ -0.51
TRAV27-201ENST00000390457 ARHGEF40Q8TER5 1519 aa11.84□□□□□ -0.51
TRAV27-201ENST00000390457 LMTK3Q96Q04 1460 aa11.83□□□□□ -0.52
TRAV27-201ENST00000390457 FBXO41Q8TF61 875 aa11.83□□□□□ -0.52
TRAV27-201ENST00000390457 FANCAO15360 1455 aa11.83□□□□□ -0.52
TRAV27-201ENST00000390457 EFCAB5A4FU69 1503 aa11.82□□□□□ -0.52
TRAV27-201ENST00000390457 ZMYM4Q5VZL5 1548 aa11.82□□□□□ -0.52
TRAV27-201ENST00000390457 RANGAP1P46060 587 aaPredicted RBP11.82□□□□□ -0.52
TRAV27-201ENST00000390457 PCF11O94913 1555 aaKnown RBP11.82□□□□□ -0.52
TRAV27-201ENST00000390457 TTC37Q6PGP7 1564 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms