RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 JPH4Q96JJ6 628 aa40.21■■■■■ 4.03
VLDLR-201ENST00000382096 CUL7Q14999 1698 aa40.03■■■■■ 4
VLDLR-201ENST00000382096 MAPKBP1O60336 1514 aa40.01■■■■■ 4
VLDLR-201ENST00000382096 ADCY10Q96PN6 1610 aa40■■■■□ 3.99
VLDLR-201ENST00000382096 KIAA0586Q9BVV6 1533 aa39.97■■■■□ 3.99
VLDLR-201ENST00000382096 ABCC10Q5T3U5 1492 aa39.97■■■■□ 3.99
VLDLR-201ENST00000382096 IGF1RP08069 1367 aa39.94■■■■□ 3.98
VLDLR-201ENST00000382096 KIF27Q86VH2 1401 aa39.92■■■■□ 3.98
VLDLR-201ENST00000382096 DIP2BQ9P265 1576 aa39.92■■■■□ 3.98
VLDLR-201ENST00000382096 NPM1P06748 294 aaKnown RBP eCLIP39.87■■■■□ 3.97
VLDLR-201ENST00000382096 FAM69CQ0P6D2 419 aa39.84■■■■□ 3.97
VLDLR-201ENST00000382096 TSPOAP1O95153 1857 aa39.66■■■■□ 3.94
VLDLR-201ENST00000382096 CARMIL1Q5VZK9 1371 aa39.66■■■■□ 3.94
VLDLR-201ENST00000382096 KDM6BO15054 1643 aa39.65■■■■□ 3.94
VLDLR-201ENST00000382096 PTPRGP23470 1445 aa39.61■■■■□ 3.93
VLDLR-201ENST00000382096 IQGAP2Q13576 1575 aa39.59■■■■□ 3.93
VLDLR-201ENST00000382096 CARMIL2Q6F5E8 1435 aa39.56■■■■□ 3.92
VLDLR-201ENST00000382096 TNIKQ9UKE5 1360 aa39.54■■■■□ 3.92
VLDLR-201ENST00000382096 ABCC2Q92887 1545 aa39.53■■■■□ 3.92
VLDLR-201ENST00000382096 UHRF1BP1LA0JNW5 1464 aa39.43■■■■□ 3.9
VLDLR-201ENST00000382096 DISP1Q96F81 1524 aa39.4■■■■□ 3.9
VLDLR-201ENST00000382096 GLI2P10070 1586 aa39.4■■■■□ 3.9
VLDLR-201ENST00000382096 PPRC1Q5VV67 1664 aaKnown RBP39.4■■■■□ 3.9
VLDLR-201ENST00000382096 TTBK1Q5TCY1 1321 aaPredicted RBP39.4■■■■□ 3.9
VLDLR-201ENST00000382096 PLB1Q6P1J6 1458 aa39.39■■■■□ 3.9
VLDLR-201ENST00000382096 ASXL2Q76L83 1435 aa39.39■■■■□ 3.9
VLDLR-201ENST00000382096 UACAQ9BZF9 1416 aa39.33■■■■□ 3.89
VLDLR-201ENST00000382096 UGGT2Q9NYU1 1516 aa39.31■■■■□ 3.88
VLDLR-201ENST00000382096 RAPGEF2Q9Y4G8 1499 aa39.3■■■■□ 3.88
VLDLR-201ENST00000382096 KDM4FA0A1W2PPD8 638 aa39.28■■■■□ 3.88
VLDLR-201ENST00000382096 KDM5BQ9UGL1 1544 aa39.25■■■■□ 3.87
VLDLR-201ENST00000382096 KIAA0556O60303 1618 aa39.25■■■■□ 3.87
VLDLR-201ENST00000382096 ZCCHC11Q5TAX3 1644 aaKnown RBP39.22■■■■□ 3.87
VLDLR-201ENST00000382096 MAP3K4Q9Y6R4 1608 aa39.22■■■■□ 3.87
VLDLR-201ENST00000382096 EPRSP07814 1512 aaKnown RBP39.17■■■■□ 3.86
VLDLR-201ENST00000382096 CTTNBP2Q8WZ74 1663 aa39.16■■■■□ 3.86
VLDLR-201ENST00000382096 TEX14Q8IWB6 1497 aa39.05■■■■□ 3.84
VLDLR-201ENST00000382096 COL17A1Q9UMD9 1497 aaPredicted RBP39.03■■■■□ 3.84
VLDLR-201ENST00000382096 WDR7Q9Y4E6 1490 aa38.98■■■■□ 3.83
VLDLR-201ENST00000382096 ADGRL1O94910 1474 aa38.97■■■■□ 3.83
VLDLR-201ENST00000382096 GOLGA3Q08378 1498 aa38.93■■■■□ 3.82
VLDLR-201ENST00000382096 ABCA8O94911 1581 aa38.9■■■■□ 3.82
VLDLR-201ENST00000382096 CFAP43Q8NDM7 1665 aa38.87■■■■□ 3.81
VLDLR-201ENST00000382096 PRXQ9BXM0 1461 aa38.83■■■■□ 3.81
VLDLR-201ENST00000382096 MAGI3Q5TCQ9 1506 aa38.78■■■■□ 3.8
VLDLR-201ENST00000382096 CD109Q6YHK3 1445 aa38.72■■■■□ 3.79
VLDLR-201ENST00000382096 KCNH8Q96L42 1107 aa38.62■■■■□ 3.77
VLDLR-201ENST00000382096 HECW2Q9P2P5 1572 aa38.58■■■■□ 3.77
VLDLR-201ENST00000382096 SAMD9Q5K651 1589 aa38.53■■■■□ 3.76
VLDLR-201ENST00000382096 ATP10BO94823 1461 aa38.51■■■■□ 3.76
VLDLR-201ENST00000382096 KIF21BO75037 1637 aa38.5■■■■□ 3.75
VLDLR-201ENST00000382096 ARAP3Q8WWN8 1544 aa38.5■■■■□ 3.75
VLDLR-201ENST00000382096 ABCA9Q8IUA7 1624 aa38.49■■■■□ 3.75
VLDLR-201ENST00000382096 FAM9AQ8IZU1 332 aaPredicted RBP38.44■■■■□ 3.74
VLDLR-201ENST00000382096 RAPGEF6Q8TEU7 1601 aa38.43■■■■□ 3.74
VLDLR-201ENST00000382096 ILDR1Q86SU0 546 aaPredicted RBP38.41■■■■□ 3.74
VLDLR-201ENST00000382096 P3H3Q8IVL6 736 aa38.41■■■■□ 3.74
VLDLR-201ENST00000382096 ARID3CA6NKF2 412 aa38.38■■■■□ 3.73
VLDLR-201ENST00000382096 PHLDB1Q86UU1 1377 aa38.34■■■■□ 3.73
VLDLR-201ENST00000382096 CSRNP3Q8WYN3 585 aa38.33■■■■□ 3.73
VLDLR-201ENST00000382096 NEO1Q92859 1461 aa38.27■■■■□ 3.72
VLDLR-201ENST00000382096 NUP153P49790 1475 aaKnown RBP38.24■■■■□ 3.71
VLDLR-201ENST00000382096 ADAMTSL3P82987 1691 aa38.23■■■■□ 3.71
VLDLR-201ENST00000382096 EEA1Q15075 1411 aa38.21■■■■□ 3.71
VLDLR-201ENST00000382096 FRMPD1Q5SYB0 1578 aa38.2■■■■□ 3.71
VLDLR-201ENST00000382096 RAPGEF3O95398 923 aa38.13■■■■□ 3.69
VLDLR-201ENST00000382096 FHOD3Q2V2M9 1422 aa38.12■■■■□ 3.69
VLDLR-201ENST00000382096 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.11■■■■□ 3.69
VLDLR-201ENST00000382096 HNRNPUL2Q1KMD3 747 aaKnown RBP38.11■■■■□ 3.69
VLDLR-201ENST00000382096 BCORL1Q5H9F3 1711 aa38.11■■■■□ 3.69
VLDLR-201ENST00000382096 PTPRMP28827 1452 aa38.09■■■■□ 3.69
VLDLR-201ENST00000382096 RICTORQ6R327 1708 aa38.06■■■■□ 3.68
VLDLR-201ENST00000382096 EFCAB5A4FU69 1503 aa38.04■■■■□ 3.68
VLDLR-201ENST00000382096 CFAP74Q9C0B2 1584 aa38.03■■■■□ 3.68
VLDLR-201ENST00000382096 ARHGEF40Q8TER5 1519 aa38.02■■■■□ 3.68
VLDLR-201ENST00000382096 MADDQ8WXG6 1647 aa38.01■■■■□ 3.67
VLDLR-201ENST00000382096 RANGAP1P46060 587 aaPredicted RBP37.99■■■■□ 3.67
VLDLR-201ENST00000382096 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.97■■■■□ 3.67
VLDLR-201ENST00000382096 PLEKHD1A6NEE1 506 aa37.96■■■■□ 3.67
VLDLR-201ENST00000382096 TTC37Q6PGP7 1564 aa37.95■■■■□ 3.67
VLDLR-201ENST00000382096 DENND4BO75064 1496 aaPredicted RBP37.95■■■■□ 3.67
VLDLR-201ENST00000382096 FANCAO15360 1455 aa37.93■■■■□ 3.66
VLDLR-201ENST00000382096 AKNAQ7Z591 1439 aa37.92■■■■□ 3.66
VLDLR-201ENST00000382096 ZMYM4Q5VZL5 1548 aa37.89■■■■□ 3.66
VLDLR-201ENST00000382096 ARID4BQ4LE39 1312 aaPredicted RBP37.87■■■■□ 3.65
VLDLR-201ENST00000382096 RIMS1Q86UR5 1692 aaKnown RBP37.87■■■■□ 3.65
VLDLR-201ENST00000382096 PCF11O94913 1555 aaKnown RBP37.86■■■■□ 3.65
VLDLR-201ENST00000382096 CDK13Q14004 1512 aaKnown RBP37.82■■■■□ 3.64
VLDLR-201ENST00000382096 LMTK3Q96Q04 1460 aa37.8■■■■□ 3.64
VLDLR-201ENST00000382096 SIGLEC1Q9BZZ2 1709 aa37.79■■■■□ 3.64
VLDLR-201ENST00000382096 ZFYVE16Q7Z3T8 1539 aa37.78■■■■□ 3.64
VLDLR-201ENST00000382096 MAGI2Q86UL8 1455 aa37.74■■■■□ 3.63
VLDLR-201ENST00000382096 HECW1Q76N89 1606 aa37.72■■■■□ 3.63
VLDLR-201ENST00000382096 POGZQ7Z3K3 1410 aa37.71■■■■□ 3.63
VLDLR-201ENST00000382096 YEATS2Q9ULM3 1422 aa37.7■■■■□ 3.63
VLDLR-201ENST00000382096 FBXO41Q8TF61 875 aa37.69■■■■□ 3.62
VLDLR-201ENST00000382096 MYO5CQ9NQX4 1742 aa37.69■■■■□ 3.62
VLDLR-201ENST00000382096 PLCH2O75038 1416 aa37.68■■■■□ 3.62
VLDLR-201ENST00000382096 CHIC1Q5VXU3 224 aa37.67■■■■□ 3.62
VLDLR-201ENST00000382096 FMN1Q68DA7 1419 aa37.65■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms