RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 NUP160Q12769 1436 aa32.65■■■□□ 2.82
TSSC4-203ENST00000380996 CTTNBP2Q8WZ74 1663 aa32.64■■■□□ 2.81
TSSC4-203ENST00000380996 CLIP1P30622 1438 aa32.62■■■□□ 2.81
TSSC4-203ENST00000380996 KIAA0586Q9BVV6 1533 aa32.62■■■□□ 2.81
TSSC4-203ENST00000380996 RANGAP1P46060 587 aaPredicted RBP32.61■■■□□ 2.81
TSSC4-203ENST00000380996 CHD1O14646 1710 aa32.6■■■□□ 2.81
TSSC4-203ENST00000380996 CEP170Q5SW79 1584 aa32.58■■■□□ 2.81
TSSC4-203ENST00000380996 IQGAP2Q13576 1575 aa32.55■■■□□ 2.8
TSSC4-203ENST00000380996 ARHGAP35Q9NRY4 1499 aa32.43■■■□□ 2.78
TSSC4-203ENST00000380996 EFCAB5A4FU69 1503 aa32.43■■■□□ 2.78
TSSC4-203ENST00000380996 JPH4Q96JJ6 628 aa32.41■■■□□ 2.78
TSSC4-203ENST00000380996 UGGT2Q9NYU1 1516 aa32.41■■■□□ 2.78
TSSC4-203ENST00000380996 OSCARQ8IYS5 282 aa32.39■■■□□ 2.78
TSSC4-203ENST00000380996 P3H3Q8IVL6 736 aa32.32■■■□□ 2.76
TSSC4-203ENST00000380996 SAMD9Q5K651 1589 aa32.32■■■□□ 2.76
TSSC4-203ENST00000380996 ARAP1Q96P48 1450 aa32.31■■■□□ 2.76
TSSC4-203ENST00000380996 CLASP1Q7Z460 1538 aa32.31■■■□□ 2.76
TSSC4-203ENST00000380996 CARMIL2Q6F5E8 1435 aa32.28■■■□□ 2.76
TSSC4-203ENST00000380996 FHOD3Q2V2M9 1422 aa32.26■■■□□ 2.75
TSSC4-203ENST00000380996 VPS8Q8N3P4 1428 aa32.25■■■□□ 2.75
TSSC4-203ENST00000380996 DISP1Q96F81 1524 aa32.25■■■□□ 2.75
TSSC4-203ENST00000380996 PRG4Q92954 1404 aaPredicted RBP32.21■■■□□ 2.75
TSSC4-203ENST00000380996 KIAA0556O60303 1618 aa32.2■■■□□ 2.75
TSSC4-203ENST00000380996 SHROOM2Q13796 1616 aa32.2■■■□□ 2.75
TSSC4-203ENST00000380996 FMN1Q68DA7 1419 aa32.17■■■□□ 2.74
TSSC4-203ENST00000380996 APLP2Q06481 763 aa32.01■■■□□ 2.72
TSSC4-203ENST00000380996 TTBK1Q5TCY1 1321 aaPredicted RBP32.01■■■□□ 2.72
TSSC4-203ENST00000380996 CASKIN1Q8WXD9 1431 aa32■■■□□ 2.71
TSSC4-203ENST00000380996 PTPRGP23470 1445 aa31.99■■■□□ 2.71
TSSC4-203ENST00000380996 FYCO1Q9BQS8 1478 aa31.97■■■□□ 2.71
TSSC4-203ENST00000380996 ATP1B4Q9UN42 357 aaPredicted RBP31.95■■■□□ 2.71
TSSC4-203ENST00000380996 ERCC6L2Q5T890 1561 aa31.95■■■□□ 2.71
TSSC4-203ENST00000380996 PCF11O94913 1555 aaKnown RBP31.93■■■□□ 2.7
TSSC4-203ENST00000380996 HECW1Q76N89 1606 aa31.83■■■□□ 2.69
TSSC4-203ENST00000380996 PLB1Q6P1J6 1458 aa31.83■■■□□ 2.69
TSSC4-203ENST00000380996 RAPGEF6Q8TEU7 1601 aa31.82■■■□□ 2.68
TSSC4-203ENST00000380996 MAP3K1Q13233 1512 aa31.81■■■□□ 2.68
TSSC4-203ENST00000380996 UACAQ9BZF9 1416 aa31.79■■■□□ 2.68
TSSC4-203ENST00000380996 ABCA8O94911 1581 aa31.78■■■□□ 2.68
TSSC4-203ENST00000380996 CCDC18Q5T9S5 1454 aa31.77■■■□□ 2.68
TSSC4-203ENST00000380996 ARHGEF11O15085 1522 aa31.75■■■□□ 2.67
TSSC4-203ENST00000380996 NUP153P49790 1475 aaKnown RBP31.74■■■□□ 2.67
TSSC4-203ENST00000380996 TIAM1Q13009 1591 aa31.73■■■□□ 2.67
TSSC4-203ENST00000380996 EPRSP07814 1512 aaKnown RBP31.72■■■□□ 2.67
TSSC4-203ENST00000380996 PPARGC1BQ86YN6 1023 aaKnown RBP31.71■■■□□ 2.67
TSSC4-203ENST00000380996 ABCC2Q92887 1545 aa31.67■■■□□ 2.66
TSSC4-203ENST00000380996 KANK4Q5T7N3 995 aaPredicted RBP31.66■■■□□ 2.66
TSSC4-203ENST00000380996 UHRF1BP1LA0JNW5 1464 aa31.66■■■□□ 2.66
TSSC4-203ENST00000380996 CFAP43Q8NDM7 1665 aa31.66■■■□□ 2.66
TSSC4-203ENST00000380996 ARID3CA6NKF2 412 aa31.65■■■□□ 2.66
TSSC4-203ENST00000380996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.65■■■□□ 2.66
TSSC4-203ENST00000380996 HNRNPUL2Q1KMD3 747 aaKnown RBP31.65■■■□□ 2.66
TSSC4-203ENST00000380996 CDK11AQ9UQ88 783 aaPredicted RBP31.64■■■□□ 2.66
TSSC4-203ENST00000380996 LRRC9Q6ZRR7 1453 aa31.62■■■□□ 2.65
TSSC4-203ENST00000380996 CDK13Q14004 1512 aaKnown RBP31.62■■■□□ 2.65
TSSC4-203ENST00000380996 LRRIQ1Q96JM4 1722 aa31.6■■■□□ 2.65
TSSC4-203ENST00000380996 RIMBP3CA6NJZ7 1639 aa31.6■■■□□ 2.65
TSSC4-203ENST00000380996 RIMBP3BA6NNM3 1639 aa31.6■■■□□ 2.65
TSSC4-203ENST00000380996 RIMBP3Q9UFD9 1639 aa31.6■■■□□ 2.65
TSSC4-203ENST00000380996 MTUS2Q5JR59 1369 aa31.59■■■□□ 2.65
TSSC4-203ENST00000380996 ATP10BO94823 1461 aa31.58■■■□□ 2.65
TSSC4-203ENST00000380996 KDM5BQ9UGL1 1544 aa31.5■■■□□ 2.63
TSSC4-203ENST00000380996 PLEKHD1A6NEE1 506 aa31.5■■■□□ 2.63
TSSC4-203ENST00000380996 CYB5RLQ6IPT4 315 aa31.5■■■□□ 2.63
TSSC4-203ENST00000380996 EHBP1L1Q8N3D4 1523 aa31.49■■■□□ 2.63
TSSC4-203ENST00000380996 ADCY10Q96PN6 1610 aa31.49■■■□□ 2.63
TSSC4-203ENST00000380996 NPM1P06748 294 aaKnown RBP eCLIP31.45■■■□□ 2.63
TSSC4-203ENST00000380996 MAGI3Q5TCQ9 1506 aa31.44■■■□□ 2.62
TSSC4-203ENST00000380996 TROQ12816 1431 aaPredicted RBP31.43■■■□□ 2.62
TSSC4-203ENST00000380996 TRIM26Q12899 539 aaPredicted RBP31.39■■■□□ 2.62
TSSC4-203ENST00000380996 ZCCHC11Q5TAX3 1644 aaKnown RBP31.39■■■□□ 2.62
TSSC4-203ENST00000380996 SUPT6HQ7KZ85 1726 aaKnown RBP31.34■■■□□ 2.61
TSSC4-203ENST00000380996 NCOA2Q15596 1464 aa31.34■■■□□ 2.61
TSSC4-203ENST00000380996 PHLDB1Q86UU1 1377 aa31.28■■■□□ 2.6
TSSC4-203ENST00000380996 KIF14Q15058 1648 aa31.24■■■□□ 2.59
TSSC4-203ENST00000380996 WDR7Q9Y4E6 1490 aa31.24■■■□□ 2.59
TSSC4-203ENST00000380996 ASXL2Q76L83 1435 aa31.23■■■□□ 2.59
TSSC4-203ENST00000380996 CCNB3Q8WWL7 1395 aa31.21■■■□□ 2.59
TSSC4-203ENST00000380996 KCNH8Q96L42 1107 aa31.21■■■□□ 2.59
TSSC4-203ENST00000380996 MYOM3Q5VTT5 1437 aa31.2■■■□□ 2.59
TSSC4-203ENST00000380996 RRBP1Q9P2E9 1410 aaKnown RBP31.18■■■□□ 2.58
TSSC4-203ENST00000380996 PCGF6Q9BYE7 350 aa31.15■■■□□ 2.58
TSSC4-203ENST00000380996 ABCC10Q5T3U5 1492 aa31.14■■■□□ 2.58
TSSC4-203ENST00000380996 MAPKBP1O60336 1514 aa31.13■■■□□ 2.57
TSSC4-203ENST00000380996 FGD6Q6ZV73 1430 aa31.13■■■□□ 2.57
TSSC4-203ENST00000380996 MIA2Q96PC5 1412 aa31.1■■■□□ 2.57
TSSC4-203ENST00000380996 GPATCH8Q9UKJ3 1502 aaKnown RBP31.08■■■□□ 2.57
TSSC4-203ENST00000380996 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.07■■■□□ 2.56
TSSC4-203ENST00000380996 CFDP1Q9UEE9 299 aaPredicted RBP31.06■■■□□ 2.56
TSSC4-203ENST00000380996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.05■■■□□ 2.56
TSSC4-203ENST00000380996 FAM50AQ14320 339 aaKnown RBP31.04■■■□□ 2.56
TSSC4-203ENST00000380996 ITSN2Q9NZM3 1697 aa31.02■■■□□ 2.56
TSSC4-203ENST00000380996 TTC37Q6PGP7 1564 aa31■■■□□ 2.55
TSSC4-203ENST00000380996 TCOF1Q13428 1488 aaKnown RBP30.97■■■□□ 2.55
TSSC4-203ENST00000380996 PTPN23Q9H3S7 1636 aa30.96■■■□□ 2.55
TSSC4-203ENST00000380996 PLCH2O75038 1416 aa30.95■■■□□ 2.55
TSSC4-203ENST00000380996 ABCA9Q8IUA7 1624 aa30.95■■■□□ 2.55
TSSC4-203ENST00000380996 CDC42BPAQ5VT25 1732 aa30.95■■■□□ 2.54
TSSC4-203ENST00000380996 ZNF777Q9ULD5 760 aaPredicted RBP30.93■■■□□ 2.54
TSSC4-203ENST00000380996 PREX2Q70Z35 1606 aa30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms