RNA–Protein interactions for RNA: ENST00000380025.8

NDEL1-202, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-202ENST00000380025 MAP3K1Q13233 1512 aa37.85■■■■□ 3.65
NDEL1-202ENST00000380025 TIAM1Q13009 1591 aa37.83■■■■□ 3.65
NDEL1-202ENST00000380025 FHAD1B1AJZ9 1412 aa37.82■■■■□ 3.65
NDEL1-202ENST00000380025 PBRM1Q86U86 1689 aa37.81■■■■□ 3.64
NDEL1-202ENST00000380025 WDR62O43379 1518 aa37.78■■■■□ 3.64
NDEL1-202ENST00000380025 PCF11O94913 1555 aaKnown RBP37.77■■■■□ 3.64
NDEL1-202ENST00000380025 FHOD3Q2V2M9 1422 aa37.75■■■■□ 3.63
NDEL1-202ENST00000380025 RRBP1Q9P2E9 1410 aaKnown RBP37.74■■■■□ 3.63
NDEL1-202ENST00000380025 P3H3Q8IVL6 736 aa37.73■■■■□ 3.63
NDEL1-202ENST00000380025 CFAP43Q8NDM7 1665 aa37.69■■■■□ 3.62
NDEL1-202ENST00000380025 AQRO60306 1485 aaKnown RBP eCLIP37.68■■■■□ 3.626e-9■■■■□ 20
NDEL1-202ENST00000380025 SAMD9Q5K651 1589 aa37.65■■■■□ 3.62
NDEL1-202ENST00000380025 IFT140Q96RY7 1462 aa37.65■■■■□ 3.62
NDEL1-202ENST00000380025 LRRC9Q6ZRR7 1453 aa37.63■■■■□ 3.62
NDEL1-202ENST00000380025 FYCO1Q9BQS8 1478 aa37.63■■■■□ 3.62
NDEL1-202ENST00000380025 ADAMTS12P58397 1594 aa37.63■■■■□ 3.61
NDEL1-202ENST00000380025 CASKIN1Q8WXD9 1431 aa37.6■■■■□ 3.61
NDEL1-202ENST00000380025 GRIN2BQ13224 1484 aa37.58■■■■□ 3.61
NDEL1-202ENST00000380025 ZNF608Q9ULD9 1512 aaPredicted RBP37.55■■■■□ 3.6
NDEL1-202ENST00000380025 CCNB3Q8WWL7 1395 aa37.55■■■■□ 3.6
NDEL1-202ENST00000380025 ERCC6Q03468 1493 aa37.55■■■■□ 3.6
NDEL1-202ENST00000380025 FMN1Q68DA7 1419 aa37.54■■■■□ 3.6
NDEL1-202ENST00000380025 THOC2Q8NI27 1593 aaKnown RBP37.51■■■■□ 3.6
NDEL1-202ENST00000380025 SNAPC4Q5SXM2 1469 aa37.5■■■■□ 3.59
NDEL1-202ENST00000380025 ATP1B4Q9UN42 357 aaPredicted RBP37.43■■■■□ 3.58
NDEL1-202ENST00000380025 EIF4G3O43432 1585 aaKnown RBP37.4■■■■□ 3.58
NDEL1-202ENST00000380025 IQGAP2Q13576 1575 aa37.4■■■■□ 3.58
NDEL1-202ENST00000380025 PHLDB1Q86UU1 1377 aa37.39■■■■□ 3.58
NDEL1-202ENST00000380025 LRRIQ1Q96JM4 1722 aa37.34■■■■□ 3.57
NDEL1-202ENST00000380025 DHX57Q6P158 1386 aaKnown RBP37.22■■■■□ 3.55
NDEL1-202ENST00000380025 UGGT2Q9NYU1 1516 aa37.2■■■■□ 3.55
NDEL1-202ENST00000380025 GRIN2AQ12879 1464 aa37.18■■■■□ 3.54
NDEL1-202ENST00000380025 ITGAEP38570 1179 aa37.18■■■■□ 3.54
NDEL1-202ENST00000380025 MAGI1Q96QZ7 1491 aaPredicted RBP37.14■■■■□ 3.54
NDEL1-202ENST00000380025 KIAA0586Q9BVV6 1533 aa37.14■■■■□ 3.54
NDEL1-202ENST00000380025 CLSPNQ9HAW4 1339 aa37.14■■■■□ 3.54
NDEL1-202ENST00000380025 MTUS2Q5JR59 1369 aa37.12■■■■□ 3.53
NDEL1-202ENST00000380025 HECW1Q76N89 1606 aa37.09■■■■□ 3.53
NDEL1-202ENST00000380025 FAM50AQ14320 339 aaKnown RBP37.07■■■■□ 3.52
NDEL1-202ENST00000380025 CCDC18Q5T9S5 1454 aa37.06■■■■□ 3.52
NDEL1-202ENST00000380025 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.06■■■■□ 3.524e-9■■■■■ 44.3
NDEL1-202ENST00000380025 EHBP1L1Q8N3D4 1523 aa37.05■■■■□ 3.52
NDEL1-202ENST00000380025 SYNJ2O15056 1496 aa37.03■■■■□ 3.52
NDEL1-202ENST00000380025 KIAA0556O60303 1618 aa37.02■■■■□ 3.52
NDEL1-202ENST00000380025 FGD6Q6ZV73 1430 aa37.02■■■■□ 3.52
NDEL1-202ENST00000380025 RAB3GAP2Q9H2M9 1393 aa37.01■■■■□ 3.52
NDEL1-202ENST00000380025 SUPT6HQ7KZ85 1726 aaKnown RBP37.01■■■■□ 3.52
NDEL1-202ENST00000380025 DISP1Q96F81 1524 aa37.01■■■■□ 3.51
NDEL1-202ENST00000380025 NCOA2Q15596 1464 aa36.99■■■■□ 3.51
NDEL1-202ENST00000380025 MAGI3Q5TCQ9 1506 aa36.99■■■■□ 3.51
NDEL1-202ENST00000380025 SETD5Q9C0A6 1442 aa36.97■■■■□ 3.51
NDEL1-202ENST00000380025 CEP170Q5SW79 1584 aa36.96■■■■□ 3.51
NDEL1-202ENST00000380025 EPRSP07814 1512 aaKnown RBP36.95■■■■□ 3.51
NDEL1-202ENST00000380025 ARHGEF11O15085 1522 aa36.92■■■■□ 3.5
NDEL1-202ENST00000380025 CHMP7Q8WUX9 453 aaPredicted RBP36.91■■■■□ 3.5
NDEL1-202ENST00000380025 MYOM3Q5VTT5 1437 aa36.9■■■■□ 3.5
NDEL1-202ENST00000380025 ZNF316A6NFI3 1004 aaPredicted RBP36.87■■■■□ 3.49
NDEL1-202ENST00000380025 CDK13Q14004 1512 aaKnown RBP36.87■■■■□ 3.49
NDEL1-202ENST00000380025 NUP160Q12769 1436 aa36.83■■■■□ 3.49
NDEL1-202ENST00000380025 DIEXFQ68CQ4 756 aaKnown RBP36.8■■■■□ 3.48
NDEL1-202ENST00000380025 MAPKBP1O60336 1514 aa36.78■■■■□ 3.48
NDEL1-202ENST00000380025 FBLN2P98095 1184 aa36.78■■■■□ 3.48
NDEL1-202ENST00000380025 RAPGEF6Q8TEU7 1601 aa36.77■■■■□ 3.48
NDEL1-202ENST00000380025 PTPN23Q9H3S7 1636 aa36.75■■■■□ 3.47
NDEL1-202ENST00000380025 NUP153P49790 1475 aaKnown RBP36.73■■■■□ 3.47
NDEL1-202ENST00000380025 PTPRKQ15262 1439 aa36.71■■■■□ 3.47
NDEL1-202ENST00000380025 ARID3CA6NKF2 412 aa36.67■■■■□ 3.46
NDEL1-202ENST00000380025 TCOF1Q13428 1488 aaKnown RBP36.66■■■■□ 3.46
NDEL1-202ENST00000380025 HFM1A2PYH4 1435 aa36.62■■■■□ 3.45
NDEL1-202ENST00000380025 JPH4Q96JJ6 628 aa36.61■■■■□ 3.45
NDEL1-202ENST00000380025 CARMIL2Q6F5E8 1435 aa36.61■■■■□ 3.45
NDEL1-202ENST00000380025 MIA2Q96PC5 1412 aa36.57■■■■□ 3.44
NDEL1-202ENST00000380025 PLB1Q6P1J6 1458 aa36.55■■■■□ 3.44
NDEL1-202ENST00000380025 NAIPQ13075 1403 aa36.51■■■■□ 3.44
NDEL1-202ENST00000380025 CHD1O14646 1710 aa36.45■■■■□ 3.43
NDEL1-202ENST00000380025 CDK11AQ9UQ88 783 aaPredicted RBP36.44■■■■□ 3.42
NDEL1-202ENST00000380025 ABCA8O94911 1581 aa36.41■■■■□ 3.42
NDEL1-202ENST00000380025 GCC2Q8IWJ2 1684 aa36.41■■■■□ 3.42
NDEL1-202ENST00000380025 TROQ12816 1431 aaPredicted RBP36.41■■■■□ 3.42
NDEL1-202ENST00000380025 UACAQ9BZF9 1416 aa36.4■■■■□ 3.42
NDEL1-202ENST00000380025 PRG4Q92954 1404 aaPredicted RBP36.38■■■■□ 3.41
NDEL1-202ENST00000380025 AKNAQ7Z591 1439 aa36.37■■■■□ 3.41
NDEL1-202ENST00000380025 ADCY10Q96PN6 1610 aa36.36■■■■□ 3.41
NDEL1-202ENST00000380025 SIN3AQ96ST3 1273 aa36.35■■■■□ 3.41
NDEL1-202ENST00000380025 CHIC2Q9UKJ5 165 aa36.29■■■■□ 3.4
NDEL1-202ENST00000380025 KIF14Q15058 1648 aa36.29■■■■□ 3.4
NDEL1-202ENST00000380025 DNMT1P26358 1616 aaKnown RBP36.28■■■■□ 3.4
NDEL1-202ENST00000380025 RRP7BPQ9NSQ0 103 aa36.27■■■■□ 3.4
NDEL1-202ENST00000380025 ITSN2Q9NZM3 1697 aa36.27■■■■□ 3.4
NDEL1-202ENST00000380025 NEUROD1Q13562 356 aa36.26■■■■□ 3.39
NDEL1-202ENST00000380025 DAPK1P53355 1430 aa36.25■■■■□ 3.39
NDEL1-202ENST00000380025 TIMELESSQ9UNS1 1208 aa36.23■■■■□ 3.39
NDEL1-202ENST00000380025 SHROOM2Q13796 1616 aa36.23■■■■□ 3.39
NDEL1-202ENST00000380025 KDM6BO15054 1643 aa36.22■■■■□ 3.39
NDEL1-202ENST00000380025 ATP10BO94823 1461 aa36.22■■■■□ 3.39
NDEL1-202ENST00000380025 ABCC5O15440 1437 aa36.2■■■■□ 3.39
NDEL1-202ENST00000380025 ZNF644Q9H582 1327 aaPredicted RBP36.2■■■■□ 3.39
NDEL1-202ENST00000380025 GPATCH8Q9UKJ3 1502 aaKnown RBP36.19■■■■□ 3.38
NDEL1-202ENST00000380025 PTPRGP23470 1445 aa36.17■■■■□ 3.38
NDEL1-202ENST00000380025 ROCK1Q13464 1354 aa36.16■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms