RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 RANGAP1P46060 587 aaPredicted RBP38.82■■■■□ 3.81
ECHDC3-201ENST00000379215 EFCAB5A4FU69 1503 aa38.82■■■■□ 3.81
ECHDC3-201ENST00000379215 IQGAP2Q13576 1575 aa38.8■■■■□ 3.8
ECHDC3-201ENST00000379215 KIAA0586Q9BVV6 1533 aa38.8■■■■□ 3.8
ECHDC3-201ENST00000379215 ARHGAP35Q9NRY4 1499 aa38.79■■■■□ 3.8
ECHDC3-201ENST00000379215 FBLN2P98095 1184 aa38.79■■■■□ 3.8
ECHDC3-201ENST00000379215 NUP160Q12769 1436 aa38.77■■■■□ 3.8
ECHDC3-201ENST00000379215 VPS8Q8N3P4 1428 aa38.73■■■■□ 3.79
ECHDC3-201ENST00000379215 ARAP1Q96P48 1450 aa38.72■■■■□ 3.79
ECHDC3-201ENST00000379215 CEP170Q5SW79 1584 aa38.71■■■■□ 3.79
ECHDC3-201ENST00000379215 CHD1O14646 1710 aa38.65■■■■□ 3.78
ECHDC3-201ENST00000379215 SAMD9Q5K651 1589 aa38.64■■■■□ 3.78
ECHDC3-201ENST00000379215 UGGT2Q9NYU1 1516 aa38.63■■■■□ 3.77
ECHDC3-201ENST00000379215 FHOD3Q2V2M9 1422 aa38.48■■■■□ 3.75
ECHDC3-201ENST00000379215 FMN1Q68DA7 1419 aa38.46■■■■□ 3.75
ECHDC3-201ENST00000379215 P3H3Q8IVL6 736 aa38.41■■■■□ 3.74
ECHDC3-201ENST00000379215 KIAA0556O60303 1618 aa38.39■■■■□ 3.74
ECHDC3-201ENST00000379215 JPH4Q96JJ6 628 aa38.38■■■■□ 3.74
ECHDC3-201ENST00000379215 DISP1Q96F81 1524 aa38.38■■■■□ 3.73
ECHDC3-201ENST00000379215 CARMIL2Q6F5E8 1435 aa38.37■■■■□ 3.73
ECHDC3-201ENST00000379215 APLP2Q06481 763 aa38.36■■■■□ 3.73
ECHDC3-201ENST00000379215 CLASP1Q7Z460 1538 aa38.3■■■■□ 3.72
ECHDC3-201ENST00000379215 FYCO1Q9BQS8 1478 aa38.29■■■■□ 3.72
ECHDC3-201ENST00000379215 CASKIN1Q8WXD9 1431 aa38.28■■■■□ 3.72
ECHDC3-201ENST00000379215 SHROOM2Q13796 1616 aa38.27■■■■□ 3.72
ECHDC3-201ENST00000379215 PCF11O94913 1555 aaKnown RBP38.24■■■■□ 3.71
ECHDC3-201ENST00000379215 MAP3K1Q13233 1512 aa38.2■■■■□ 3.71
ECHDC3-201ENST00000379215 PRG4Q92954 1404 aaPredicted RBP38.19■■■■□ 3.7
ECHDC3-201ENST00000379215 OSCARQ8IYS5 282 aa38.11■■■■□ 3.69
ECHDC3-201ENST00000379215 HECW1Q76N89 1606 aa38.07■■■■□ 3.68
ECHDC3-201ENST00000379215 TIAM1Q13009 1591 aa38.07■■■■□ 3.68
ECHDC3-201ENST00000379215 CFAP43Q8NDM7 1665 aa38.03■■■■□ 3.68
ECHDC3-201ENST00000379215 ATP1B4Q9UN42 357 aaPredicted RBP38.01■■■■□ 3.68
ECHDC3-201ENST00000379215 PPARGC1BQ86YN6 1023 aaKnown RBP38.01■■■■□ 3.67
ECHDC3-201ENST00000379215 CCDC18Q5T9S5 1454 aa38■■■■□ 3.67
ECHDC3-201ENST00000379215 TRIM26Q12899 539 aaPredicted RBP37.99■■■■□ 3.67
ECHDC3-201ENST00000379215 RAPGEF6Q8TEU7 1601 aa37.97■■■■□ 3.67
ECHDC3-201ENST00000379215 PTPRGP23470 1445 aa37.94■■■■□ 3.66
ECHDC3-201ENST00000379215 LRRC9Q6ZRR7 1453 aa37.89■■■■□ 3.66
ECHDC3-201ENST00000379215 TTBK1Q5TCY1 1321 aaPredicted RBP37.89■■■■□ 3.66
ECHDC3-201ENST00000379215 EPRSP07814 1512 aaKnown RBP37.87■■■■□ 3.65
ECHDC3-201ENST00000379215 ABCA8O94911 1581 aa37.86■■■■□ 3.65
ECHDC3-201ENST00000379215 KANK4Q5T7N3 995 aaPredicted RBP37.86■■■■□ 3.65
ECHDC3-201ENST00000379215 ERCC6L2Q5T890 1561 aa37.86■■■■□ 3.65
ECHDC3-201ENST00000379215 PLB1Q6P1J6 1458 aa37.85■■■■□ 3.65
ECHDC3-201ENST00000379215 NUP153P49790 1475 aaKnown RBP37.84■■■■□ 3.65
ECHDC3-201ENST00000379215 LRRIQ1Q96JM4 1722 aa37.82■■■■□ 3.64
ECHDC3-201ENST00000379215 UACAQ9BZF9 1416 aa37.75■■■■□ 3.63
ECHDC3-201ENST00000379215 MTUS2Q5JR59 1369 aa37.74■■■■□ 3.63
ECHDC3-201ENST00000379215 EHBP1L1Q8N3D4 1523 aa37.73■■■■□ 3.63
ECHDC3-201ENST00000379215 PCGF6Q9BYE7 350 aa37.72■■■■□ 3.63
ECHDC3-201ENST00000379215 CDK13Q14004 1512 aaKnown RBP37.71■■■■□ 3.63
ECHDC3-201ENST00000379215 CDK11AQ9UQ88 783 aaPredicted RBP37.68■■■■□ 3.62
ECHDC3-201ENST00000379215 ABCC2Q92887 1545 aa37.65■■■■□ 3.62
ECHDC3-201ENST00000379215 UHRF1BP1LA0JNW5 1464 aa37.63■■■■□ 3.61
ECHDC3-201ENST00000379215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.58■■■■□ 3.61
ECHDC3-201ENST00000379215 HNRNPUL2Q1KMD3 747 aaKnown RBP37.58■■■■□ 3.61
ECHDC3-201ENST00000379215 SUPT6HQ7KZ85 1726 aaKnown RBP37.57■■■■□ 3.6
ECHDC3-201ENST00000379215 ATP10BO94823 1461 aa37.56■■■■□ 3.6
ECHDC3-201ENST00000379215 MAGI3Q5TCQ9 1506 aa37.56■■■■□ 3.6
ECHDC3-201ENST00000379215 ARID3CA6NKF2 412 aa37.55■■■■□ 3.6
ECHDC3-201ENST00000379215 TROQ12816 1431 aaPredicted RBP37.5■■■■□ 3.59
ECHDC3-201ENST00000379215 RRBP1Q9P2E9 1410 aaKnown RBP37.5■■■■□ 3.59
ECHDC3-201ENST00000379215 NCOA2Q15596 1464 aa37.49■■■■□ 3.59
ECHDC3-201ENST00000379215 ARHGEF11O15085 1522 aa37.46■■■■□ 3.59
ECHDC3-201ENST00000379215 PHLDB1Q86UU1 1377 aa37.45■■■■□ 3.59
ECHDC3-201ENST00000379215 PLEKHD1A6NEE1 506 aa37.43■■■■□ 3.58
ECHDC3-201ENST00000379215 KDM5BQ9UGL1 1544 aa37.42■■■■□ 3.58
ECHDC3-201ENST00000379215 CCNB3Q8WWL7 1395 aa37.4■■■■□ 3.58
ECHDC3-201ENST00000379215 ADCY10Q96PN6 1610 aa37.37■■■■□ 3.57
ECHDC3-201ENST00000379215 MYOM3Q5VTT5 1437 aa37.35■■■■□ 3.57
ECHDC3-201ENST00000379215 ZCCHC11Q5TAX3 1644 aaKnown RBP37.33■■■■□ 3.57
ECHDC3-201ENST00000379215 KIF14Q15058 1648 aa37.31■■■■□ 3.56
ECHDC3-201ENST00000379215 FGD6Q6ZV73 1430 aa37.29■■■■□ 3.56
ECHDC3-201ENST00000379215 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.28■■■■□ 3.56
ECHDC3-201ENST00000379215 RIMBP3CA6NJZ7 1639 aa37.26■■■■□ 3.55
ECHDC3-201ENST00000379215 RIMBP3BA6NNM3 1639 aa37.26■■■■□ 3.55
ECHDC3-201ENST00000379215 RIMBP3Q9UFD9 1639 aa37.26■■■■□ 3.55
ECHDC3-201ENST00000379215 MIA2Q96PC5 1412 aa37.24■■■■□ 3.55
ECHDC3-201ENST00000379215 ITSN2Q9NZM3 1697 aa37.16■■■■□ 3.54
ECHDC3-201ENST00000379215 NPM1P06748 294 aaKnown RBP eCLIP37.16■■■■□ 3.54
ECHDC3-201ENST00000379215 ABCC10Q5T3U5 1492 aa37.14■■■■□ 3.54
ECHDC3-201ENST00000379215 TCOF1Q13428 1488 aaKnown RBP37.11■■■■□ 3.53
ECHDC3-201ENST00000379215 FAM50AQ14320 339 aaKnown RBP37.11■■■■□ 3.53
ECHDC3-201ENST00000379215 PTPN23Q9H3S7 1636 aa37.11■■■■□ 3.53
ECHDC3-201ENST00000379215 WDR7Q9Y4E6 1490 aa37.09■■■■□ 3.53
ECHDC3-201ENST00000379215 GPATCH8Q9UKJ3 1502 aaKnown RBP37.08■■■■□ 3.53
ECHDC3-201ENST00000379215 CYB5RLQ6IPT4 315 aa37.02■■■■□ 3.52
ECHDC3-201ENST00000379215 ASXL2Q76L83 1435 aa37■■■■□ 3.51
ECHDC3-201ENST00000379215 CFDP1Q9UEE9 299 aaPredicted RBP37■■■■□ 3.51
ECHDC3-201ENST00000379215 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37■■■■□ 3.51
ECHDC3-201ENST00000379215 CDC42BPAQ5VT25 1732 aa36.98■■■■□ 3.51
ECHDC3-201ENST00000379215 TTC37Q6PGP7 1564 aa36.94■■■■□ 3.5
ECHDC3-201ENST00000379215 KCNH8Q96L42 1107 aa36.93■■■■□ 3.5
ECHDC3-201ENST00000379215 PREX2Q70Z35 1606 aa36.93■■■■□ 3.5
ECHDC3-201ENST00000379215 MAPKBP1O60336 1514 aa36.89■■■■□ 3.5
ECHDC3-201ENST00000379215 ITGAEP38570 1179 aa36.89■■■■□ 3.5
ECHDC3-201ENST00000379215 MYO5CQ9NQX4 1742 aa36.88■■■■□ 3.5
ECHDC3-201ENST00000379215 CAMSAP2Q08AD1 1489 aa36.88■■■■□ 3.49
ECHDC3-201ENST00000379215 ARAP3Q8WWN8 1544 aa36.84■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms