RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 MAGI1Q96QZ7 1491 aaPredicted RBP27.49■■□□□ 1.99
LYSMD4-203ENST00000378904 PPARGC1BQ86YN6 1023 aaKnown RBP27.43■■□□□ 1.98
LYSMD4-203ENST00000378904 GRIN2AQ12879 1464 aa27.4■■□□□ 1.98
LYSMD4-203ENST00000378904 EFCAB5A4FU69 1503 aa27.4■■□□□ 1.98
LYSMD4-203ENST00000378904 TRIM26Q12899 539 aaPredicted RBP27.4■■□□□ 1.98
LYSMD4-203ENST00000378904 PCGF6Q9BYE7 350 aa27.4■■□□□ 1.98
LYSMD4-203ENST00000378904 SYNJ2O15056 1496 aa27.39■■□□□ 1.98
LYSMD4-203ENST00000378904 IQGAP2Q13576 1575 aa27.34■■□□□ 1.97
LYSMD4-203ENST00000378904 CHMP7Q8WUX9 453 aaPredicted RBP27.32■■□□□ 1.96
LYSMD4-203ENST00000378904 SAMD9Q5K651 1589 aa27.32■■□□□ 1.96
LYSMD4-203ENST00000378904 P3H3Q8IVL6 736 aa27.3■■□□□ 1.96
LYSMD4-203ENST00000378904 FHOD3Q2V2M9 1422 aa27.28■■□□□ 1.96
LYSMD4-203ENST00000378904 APLP2Q06481 763 aa27.27■■□□□ 1.96
LYSMD4-203ENST00000378904 FBLN2P98095 1184 aa27.26■■□□□ 1.96
LYSMD4-203ENST00000378904 KIAA0586Q9BVV6 1533 aa27.26■■□□□ 1.95
LYSMD4-203ENST00000378904 CEP170Q5SW79 1584 aa27.24■■□□□ 1.95
LYSMD4-203ENST00000378904 TTBK1Q5TCY1 1321 aaPredicted RBP27.22■■□□□ 1.95
LYSMD4-203ENST00000378904 NUP160Q12769 1436 aa27.19■■□□□ 1.94
LYSMD4-203ENST00000378904 UGGT2Q9NYU1 1516 aa27.19■■□□□ 1.94
LYSMD4-203ENST00000378904 PCF11O94913 1555 aaKnown RBP27.17■■□□□ 1.94
LYSMD4-203ENST00000378904 CHD1O14646 1710 aa27.16■■□□□ 1.94
LYSMD4-203ENST00000378904 FMN1Q68DA7 1419 aa27.14■■□□□ 1.94
LYSMD4-203ENST00000378904 CASKIN1Q8WXD9 1431 aa27.09■■□□□ 1.93
LYSMD4-203ENST00000378904 FYCO1Q9BQS8 1478 aa27.09■■□□□ 1.93
LYSMD4-203ENST00000378904 KIAA0556O60303 1618 aa27.07■■□□□ 1.92
LYSMD4-203ENST00000378904 TIAM1Q13009 1591 aa27.06■■□□□ 1.92
LYSMD4-203ENST00000378904 MAP3K1Q13233 1512 aa27.06■■□□□ 1.92
LYSMD4-203ENST00000378904 DISP1Q96F81 1524 aa27.06■■□□□ 1.92
LYSMD4-203ENST00000378904 KANK4Q5T7N3 995 aaPredicted RBP27.04■■□□□ 1.92
LYSMD4-203ENST00000378904 CFAP43Q8NDM7 1665 aa27.03■■□□□ 1.92
LYSMD4-203ENST00000378904 ATP1B4Q9UN42 357 aaPredicted RBP27.01■■□□□ 1.91
LYSMD4-203ENST00000378904 JPH4Q96JJ6 628 aa26.98■■□□□ 1.91
LYSMD4-203ENST00000378904 LRRIQ1Q96JM4 1722 aa26.95■■□□□ 1.91
LYSMD4-203ENST00000378904 HRCP23327 699 aa26.93■■□□□ 1.9
LYSMD4-203ENST00000378904 LRRC9Q6ZRR7 1453 aa26.92■■□□□ 1.9
LYSMD4-203ENST00000378904 CARMIL2Q6F5E8 1435 aa26.92■■□□□ 1.9
LYSMD4-203ENST00000378904 HECW1Q76N89 1606 aa26.89■■□□□ 1.9
LYSMD4-203ENST00000378904 SHROOM2Q13796 1616 aa26.84■■□□□ 1.89
LYSMD4-203ENST00000378904 PRG4Q92954 1404 aaPredicted RBP26.82■■□□□ 1.88
LYSMD4-203ENST00000378904 CCDC18Q5T9S5 1454 aa26.81■■□□□ 1.88
LYSMD4-203ENST00000378904 RAPGEF6Q8TEU7 1601 aa26.81■■□□□ 1.88
LYSMD4-203ENST00000378904 CLASP1Q7Z460 1538 aa26.8■■□□□ 1.88
LYSMD4-203ENST00000378904 EPRSP07814 1512 aaKnown RBP26.78■■□□□ 1.88
LYSMD4-203ENST00000378904 MTUS2Q5JR59 1369 aa26.73■■□□□ 1.87
LYSMD4-203ENST00000378904 NUP153P49790 1475 aaKnown RBP26.73■■□□□ 1.87
LYSMD4-203ENST00000378904 RRBP1Q9P2E9 1410 aaKnown RBP26.72■■□□□ 1.87
LYSMD4-203ENST00000378904 CDK13Q14004 1512 aaKnown RBP26.72■■□□□ 1.87
LYSMD4-203ENST00000378904 PLB1Q6P1J6 1458 aa26.72■■□□□ 1.87
LYSMD4-203ENST00000378904 EHBP1L1Q8N3D4 1523 aa26.7■■□□□ 1.86
LYSMD4-203ENST00000378904 MAGI3Q5TCQ9 1506 aa26.68■■□□□ 1.86
LYSMD4-203ENST00000378904 PHLDB1Q86UU1 1377 aa26.68■■□□□ 1.86
LYSMD4-203ENST00000378904 ABCA8O94911 1581 aa26.67■■□□□ 1.86
LYSMD4-203ENST00000378904 ERCC6L2Q5T890 1561 aa26.67■■□□□ 1.86
LYSMD4-203ENST00000378904 ARID3CA6NKF2 412 aa26.66■■□□□ 1.86
LYSMD4-203ENST00000378904 SUPT6HQ7KZ85 1726 aaKnown RBP26.65■■□□□ 1.86
LYSMD4-203ENST00000378904 PTPRGP23470 1445 aa26.64■■□□□ 1.86
LYSMD4-203ENST00000378904 CCNB3Q8WWL7 1395 aa26.64■■□□□ 1.85
LYSMD4-203ENST00000378904 HNRNPUL2Q1KMD3 747 aaKnown RBP26.6■■□□□ 1.85
LYSMD4-203ENST00000378904 NCOA2Q15596 1464 aa26.59■■□□□ 1.85
LYSMD4-203ENST00000378904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.55■■□□□ 1.84
LYSMD4-203ENST00000378904 ARHGEF11O15085 1522 aa26.55■■□□□ 1.84
LYSMD4-203ENST00000378904 OSCARQ8IYS5 282 aa26.52■■□□□ 1.84
LYSMD4-203ENST00000378904 CDK11AQ9UQ88 783 aaPredicted RBP26.51■■□□□ 1.84
LYSMD4-203ENST00000378904 UACAQ9BZF9 1416 aa26.5■■□□□ 1.83
LYSMD4-203ENST00000378904 MYOM3Q5VTT5 1437 aa26.48■■□□□ 1.83
LYSMD4-203ENST00000378904 FGD6Q6ZV73 1430 aa26.48■■□□□ 1.83
LYSMD4-203ENST00000378904 ATP10BO94823 1461 aa26.48■■□□□ 1.83
LYSMD4-203ENST00000378904 TROQ12816 1431 aaPredicted RBP26.45■■□□□ 1.82
LYSMD4-203ENST00000378904 FAM50AQ14320 339 aaKnown RBP26.44■■□□□ 1.82
LYSMD4-203ENST00000378904 ABCC2Q92887 1545 aa26.43■■□□□ 1.82
LYSMD4-203ENST00000378904 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.43■■□□□ 1.82
LYSMD4-203ENST00000378904 ADCY10Q96PN6 1610 aa26.41■■□□□ 1.82
LYSMD4-203ENST00000378904 ITGAEP38570 1179 aa26.4■■□□□ 1.82
LYSMD4-203ENST00000378904 PTPN23Q9H3S7 1636 aa26.38■■□□□ 1.81
LYSMD4-203ENST00000378904 KIF14Q15058 1648 aa26.37■■□□□ 1.81
LYSMD4-203ENST00000378904 PLEKHD1A6NEE1 506 aa26.36■■□□□ 1.81
LYSMD4-203ENST00000378904 UHRF1BP1LA0JNW5 1464 aa26.35■■□□□ 1.81
LYSMD4-203ENST00000378904 MIA2Q96PC5 1412 aa26.32■■□□□ 1.8
LYSMD4-203ENST00000378904 CCER1Q8TC90 406 aaPredicted RBP26.32■■□□□ 1.8
LYSMD4-203ENST00000378904 TCOF1Q13428 1488 aaKnown RBP26.31■■□□□ 1.8
LYSMD4-203ENST00000378904 ITSN2Q9NZM3 1697 aa26.28■■□□□ 1.8
LYSMD4-203ENST00000378904 ZCCHC11Q5TAX3 1644 aaKnown RBP26.28■■□□□ 1.8
LYSMD4-203ENST00000378904 ZEB1P37275 1124 aaPredicted RBP26.26■■□□□ 1.79
LYSMD4-203ENST00000378904 KDM5BQ9UGL1 1544 aa26.26■■□□□ 1.79
LYSMD4-203ENST00000378904 ABCC10Q5T3U5 1492 aa26.23■■□□□ 1.79
LYSMD4-203ENST00000378904 GPATCH8Q9UKJ3 1502 aaKnown RBP26.23■■□□□ 1.79
LYSMD4-203ENST00000378904 CDC42BPAQ5VT25 1732 aa26.21■■□□□ 1.79
LYSMD4-203ENST00000378904 PTPRKQ15262 1439 aa26.19■■□□□ 1.78
LYSMD4-203ENST00000378904 SETD5Q9C0A6 1442 aa26.16■■□□□ 1.78
LYSMD4-203ENST00000378904 CFDP1Q9UEE9 299 aaPredicted RBP26.15■■□□□ 1.78
LYSMD4-203ENST00000378904 RAB3GAP2Q9H2M9 1393 aa26.14■■□□□ 1.77
LYSMD4-203ENST00000378904 ZNF644Q9H582 1327 aaPredicted RBP26.12■■□□□ 1.77
LYSMD4-203ENST00000378904 CAMSAP2Q08AD1 1489 aa26.12■■□□□ 1.77
LYSMD4-203ENST00000378904 DNMT1P26358 1616 aaKnown RBP26.1■■□□□ 1.77
LYSMD4-203ENST00000378904 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.1■■□□□ 1.77
LYSMD4-203ENST00000378904 TTC37Q6PGP7 1564 aa26.1■■□□□ 1.77
LYSMD4-203ENST00000378904 PREX2Q70Z35 1606 aa26.09■■□□□ 1.77
LYSMD4-203ENST00000378904 CDC42BPBQ9Y5S2 1711 aa26.08■■□□□ 1.76
LYSMD4-203ENST00000378904 DAPK1P53355 1430 aa26.06■■□□□ 1.76
LYSMD4-203ENST00000378904 DHX57Q6P158 1386 aaKnown RBP26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms