RNA–Protein interactions for RNA: ENST00000378292.7

TPM2-203, Transcript of tropomyosin 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM2, Length 2,147 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-203ENST00000378292 FHAD1B1AJZ9 1412 aa40.32■■■■■ 4.04
TPM2-203ENST00000378292 P3H3Q8IVL6 736 aa40.29■■■■■ 4.04
TPM2-203ENST00000378292 MAP3K1Q13233 1512 aa40.28■■■■■ 4.04
TPM2-203ENST00000378292 TIAM1Q13009 1591 aa40.26■■■■■ 4.03
TPM2-203ENST00000378292 FHOD3Q2V2M9 1422 aa40.24■■■■■ 4.03
TPM2-203ENST00000378292 WDR62O43379 1518 aa40.22■■■■■ 4.03
TPM2-203ENST00000378292 PBRM1Q86U86 1689 aa40.21■■■■■ 4.03
TPM2-203ENST00000378292 PCF11O94913 1555 aaKnown RBP40.19■■■■■ 4.02
TPM2-203ENST00000378292 AQRO60306 1485 aaKnown RBP eCLIP40.18■■■■■ 4.02
TPM2-203ENST00000378292 RRBP1Q9P2E9 1410 aaKnown RBP40.18■■■■■ 4.02
TPM2-203ENST00000378292 IFT140Q96RY7 1462 aa40.12■■■■■ 4.01
TPM2-203ENST00000378292 LRRC9Q6ZRR7 1453 aa40.09■■■■■ 4.01
TPM2-203ENST00000378292 FYCO1Q9BQS8 1478 aa40.08■■■■■ 4.01
TPM2-203ENST00000378292 CFAP43Q8NDM7 1665 aa40.07■■■■■ 4.01
TPM2-203ENST00000378292 ERCC6Q03468 1493 aa40.07■■■■■ 4.01
TPM2-203ENST00000378292 GRIN2BQ13224 1484 aa40.05■■■■■ 4
TPM2-203ENST00000378292 CASKIN1Q8WXD9 1431 aa40.05■■■■■ 4
TPM2-203ENST00000378292 SAMD9Q5K651 1589 aa40.05■■■■■ 4
TPM2-203ENST00000378292 ADAMTS12P58397 1594 aa40.04■■■■■ 4
TPM2-203ENST00000378292 CCNB3Q8WWL7 1395 aa40.02■■■■■ 4
TPM2-203ENST00000378292 FMN1Q68DA7 1419 aa40.02■■■■■ 4
TPM2-203ENST00000378292 ZNF608Q9ULD9 1512 aaPredicted RBP40.02■■■■■ 4
TPM2-203ENST00000378292 ATP1B4Q9UN42 357 aaPredicted RBP40■■■■□ 3.99
TPM2-203ENST00000378292 THOC2Q8NI27 1593 aaKnown RBP39.91■■■■□ 3.98
TPM2-203ENST00000378292 SNAPC4Q5SXM2 1469 aa39.9■■■■□ 3.98
TPM2-203ENST00000378292 PHLDB1Q86UU1 1377 aa39.84■■■■□ 3.97
TPM2-203ENST00000378292 IQGAP2Q13576 1575 aa39.82■■■■□ 3.97
TPM2-203ENST00000378292 EIF4G3O43432 1585 aaKnown RBP39.81■■■■□ 3.96
TPM2-203ENST00000378292 ITGAEP38570 1179 aa39.7■■■■□ 3.95
TPM2-203ENST00000378292 LRRIQ1Q96JM4 1722 aa39.68■■■■□ 3.94
TPM2-203ENST00000378292 DHX57Q6P158 1386 aaKnown RBP39.64■■■■□ 3.94
TPM2-203ENST00000378292 UGGT2Q9NYU1 1516 aa39.61■■■■□ 3.93
TPM2-203ENST00000378292 GRIN2AQ12879 1464 aa39.61■■■■□ 3.93
TPM2-203ENST00000378292 MTUS2Q5JR59 1369 aa39.6■■■■□ 3.93
TPM2-203ENST00000378292 KIAA0586Q9BVV6 1533 aa39.58■■■■□ 3.93
TPM2-203ENST00000378292 CLSPNQ9HAW4 1339 aa39.58■■■■□ 3.93
TPM2-203ENST00000378292 MAGI1Q96QZ7 1491 aaPredicted RBP39.58■■■■□ 3.93
TPM2-203ENST00000378292 FAM50AQ14320 339 aaKnown RBP39.58■■■■□ 3.93
TPM2-203ENST00000378292 CCDC18Q5T9S5 1454 aa39.48■■■■□ 3.91
TPM2-203ENST00000378292 HECW1Q76N89 1606 aa39.48■■■■□ 3.91
TPM2-203ENST00000378292 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.47■■■■□ 3.911e-7■■■■□ 23.7
TPM2-203ENST00000378292 SYNJ2O15056 1496 aa39.46■■■■□ 3.91
TPM2-203ENST00000378292 RAB3GAP2Q9H2M9 1393 aa39.45■■■■□ 3.91
TPM2-203ENST00000378292 EHBP1L1Q8N3D4 1523 aa39.44■■■■□ 3.9
TPM2-203ENST00000378292 FGD6Q6ZV73 1430 aa39.44■■■■□ 3.9
TPM2-203ENST00000378292 CHMP7Q8WUX9 453 aaPredicted RBP39.43■■■■□ 3.9
TPM2-203ENST00000378292 DISP1Q96F81 1524 aa39.41■■■■□ 3.9
TPM2-203ENST00000378292 KIAA0556O60303 1618 aa39.41■■■■□ 3.9
TPM2-203ENST00000378292 NCOA2Q15596 1464 aa39.41■■■■□ 3.9
TPM2-203ENST00000378292 SETD5Q9C0A6 1442 aa39.4■■■■□ 3.9
TPM2-203ENST00000378292 SUPT6HQ7KZ85 1726 aaKnown RBP39.39■■■■□ 3.9
TPM2-203ENST00000378292 EPRSP07814 1512 aaKnown RBP39.36■■■■□ 3.89
TPM2-203ENST00000378292 MAGI3Q5TCQ9 1506 aa39.36■■■■□ 3.89
TPM2-203ENST00000378292 CEP170Q5SW79 1584 aa39.35■■■■□ 3.89
TPM2-203ENST00000378292 MYOM3Q5VTT5 1437 aa39.31■■■■□ 3.88
TPM2-203ENST00000378292 ZNF316A6NFI3 1004 aaPredicted RBP39.31■■■■□ 3.88
TPM2-203ENST00000378292 FBLN2P98095 1184 aa39.31■■■■□ 3.88
TPM2-203ENST00000378292 ARHGEF11O15085 1522 aa39.27■■■■□ 3.88
TPM2-203ENST00000378292 CDK13Q14004 1512 aaKnown RBP39.26■■■■□ 3.88
TPM2-203ENST00000378292 DIEXFQ68CQ4 756 aaKnown RBP39.25■■■■□ 3.87
TPM2-203ENST00000378292 NUP160Q12769 1436 aa39.23■■■■□ 3.87
TPM2-203ENST00000378292 ARID3CA6NKF2 412 aa39.16■■■■□ 3.86
TPM2-203ENST00000378292 RAPGEF6Q8TEU7 1601 aa39.14■■■■□ 3.86
TPM2-203ENST00000378292 MAPKBP1O60336 1514 aa39.13■■■■□ 3.86
TPM2-203ENST00000378292 PTPN23Q9H3S7 1636 aa39.13■■■■□ 3.85
TPM2-203ENST00000378292 NUP153P49790 1475 aaKnown RBP39.12■■■■□ 3.85
TPM2-203ENST00000378292 PTPRKQ15262 1439 aa39.09■■■■□ 3.85
TPM2-203ENST00000378292 JPH4Q96JJ6 628 aa39.08■■■■□ 3.85
TPM2-203ENST00000378292 CARMIL2Q6F5E8 1435 aa39.06■■■■□ 3.84
TPM2-203ENST00000378292 TCOF1Q13428 1488 aaKnown RBP39.02■■■■□ 3.84
TPM2-203ENST00000378292 HFM1A2PYH4 1435 aa39.01■■■■□ 3.83
TPM2-203ENST00000378292 MIA2Q96PC5 1412 aa38.96■■■■□ 3.83
TPM2-203ENST00000378292 PLB1Q6P1J6 1458 aa38.96■■■■□ 3.83
TPM2-203ENST00000378292 CDK11AQ9UQ88 783 aaPredicted RBP38.93■■■■□ 3.82
TPM2-203ENST00000378292 NAIPQ13075 1403 aa38.89■■■■□ 3.82
TPM2-203ENST00000378292 TROQ12816 1431 aaPredicted RBP38.8■■■■□ 3.8
TPM2-203ENST00000378292 CHD1O14646 1710 aa38.78■■■■□ 3.8
TPM2-203ENST00000378292 PRG4Q92954 1404 aaPredicted RBP38.78■■■■□ 3.8
TPM2-203ENST00000378292 UACAQ9BZF9 1416 aa38.78■■■■□ 3.8
TPM2-203ENST00000378292 SIN3AQ96ST3 1273 aa38.77■■■■□ 3.8
TPM2-203ENST00000378292 ABCA8O94911 1581 aa38.75■■■■□ 3.79
TPM2-203ENST00000378292 CHIC2Q9UKJ5 165 aa38.74■■■■□ 3.79
TPM2-203ENST00000378292 AKNAQ7Z591 1439 aa38.72■■■■□ 3.79
TPM2-203ENST00000378292 NEUROD1Q13562 356 aa38.71■■■■□ 3.79
TPM2-203ENST00000378292 RRP7BPQ9NSQ0 103 aa38.71■■■■□ 3.79
TPM2-203ENST00000378292 GCC2Q8IWJ2 1684 aa38.7■■■■□ 3.79
TPM2-203ENST00000378292 ADCY10Q96PN6 1610 aa38.66■■■■□ 3.78
TPM2-203ENST00000378292 TIMELESSQ9UNS1 1208 aa38.64■■■■□ 3.78
TPM2-203ENST00000378292 KIF14Q15058 1648 aa38.62■■■■□ 3.77
TPM2-203ENST00000378292 DAPK1P53355 1430 aa38.62■■■■□ 3.77
TPM2-203ENST00000378292 ZNF644Q9H582 1327 aaPredicted RBP38.61■■■■□ 3.77
TPM2-203ENST00000378292 DNMT1P26358 1616 aaKnown RBP38.61■■■■□ 3.77
TPM2-203ENST00000378292 ATP10BO94823 1461 aa38.6■■■■□ 3.77
TPM2-203ENST00000378292 PTPRGP23470 1445 aa38.59■■■■□ 3.77
TPM2-203ENST00000378292 ITSN2Q9NZM3 1697 aa38.59■■■■□ 3.77
TPM2-203ENST00000378292 ABCC5O15440 1437 aa38.57■■■■□ 3.76
TPM2-203ENST00000378292 GPATCH8Q9UKJ3 1502 aaKnown RBP38.57■■■■□ 3.76
TPM2-203ENST00000378292 PLEKHD1A6NEE1 506 aa38.54■■■■□ 3.76
TPM2-203ENST00000378292 CFDP1Q9UEE9 299 aaPredicted RBP38.54■■■■□ 3.76
TPM2-203ENST00000378292 SHROOM2Q13796 1616 aa38.54■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms