RNA–Protein interactions for RNA: ENST00000377200.9

PTAR1-202, Transcript of protein prenyltransferase alpha subunit repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene PTAR1, Length 9,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTAR1-202ENST00000377200 SOGA1O94964 1423 aa5.64□□□□□ -1.51
PTAR1-202ENST00000377200 ERICH3Q5RHP9 1530 aa5.63□□□□□ -1.51
PTAR1-202ENST00000377200 DEKP35659 375 aaKnown RBP5.62□□□□□ -1.51
PTAR1-202ENST00000377200 ABCA10Q8WWZ4 1543 aa5.62□□□□□ -1.51
PTAR1-202ENST00000377200 POLA1P09884 1462 aaPredicted RBP5.61□□□□□ -1.51
PTAR1-202ENST00000377200 SLC24A1O60721 1099 aa5.61□□□□□ -1.51
PTAR1-202ENST00000377200 WDR62O43379 1518 aa5.61□□□□□ -1.51
PTAR1-202ENST00000377200 IFT140Q96RY7 1462 aa5.61□□□□□ -1.51
PTAR1-202ENST00000377200 ERICH6BQ5W0A0 696 aa5.61□□□□□ -1.51
PTAR1-202ENST00000377200 HNRNPUL2Q1KMD3 747 aaKnown RBP5.61□□□□□ -1.51
PTAR1-202ENST00000377200 TNIKQ9UKE5 1360 aa5.61□□□□□ -1.51
PTAR1-202ENST00000377200 DNAJC5BQ9UF47 199 aa5.6□□□□□ -1.51
PTAR1-202ENST00000377200 ZBTB47Q9UFB7 747 aaPredicted RBP5.6□□□□□ -1.51
PTAR1-202ENST00000377200 RTN4Q9NQC3 1192 aaKnown RBP5.6□□□□□ -1.51
PTAR1-202ENST00000377200 URB2Q14146 1524 aaKnown RBP5.6□□□□□ -1.51
PTAR1-202ENST00000377200 SUPT16HQ9Y5B9 1047 aaKnown RBP5.59□□□□□ -1.51
PTAR1-202ENST00000377200 GAPVD1Q14C86 1478 aa5.59□□□□□ -1.52
PTAR1-202ENST00000377200 PBRM1Q86U86 1689 aa5.58□□□□□ -1.52
PTAR1-202ENST00000377200 NPM2Q86SE8 214 aaKnown RBP5.58□□□□□ -1.52
PTAR1-202ENST00000377200 TSHZ2Q9NRE2 1034 aa5.58□□□□□ -1.52
PTAR1-202ENST00000377200 RAPGEF2Q9Y4G8 1499 aa5.58□□□□□ -1.52
PTAR1-202ENST00000377200 CARMIL1Q5VZK9 1371 aa5.58□□□□□ -1.52
PTAR1-202ENST00000377200 ANP32CO43423 234 aa5.57□□□□□ -1.52
PTAR1-202ENST00000377200 MIER1Q8N108 512 aa5.57□□□□□ -1.52
PTAR1-202ENST00000377200 THOC2Q8NI27 1593 aaKnown RBP5.56□□□□□ -1.52
PTAR1-202ENST00000377200 CTTNBP2Q8WZ74 1663 aa5.56□□□□□ -1.52
PTAR1-202ENST00000377200 GRIN2BQ13224 1484 aa5.56□□□□□ -1.52
PTAR1-202ENST00000377200 ABCA5Q8WWZ7 1642 aa5.56□□□□□ -1.52
PTAR1-202ENST00000377200 CLIP1P30622 1438 aa5.56□□□□□ -1.52
PTAR1-202ENST00000377200 CEP162Q5TB80 1403 aa5.56□□□□□ -1.52
PTAR1-202ENST00000377200 NEFMP07197 916 aa5.56□□□□□ -1.52
PTAR1-202ENST00000377200 RAD54L2Q9Y4B4 1467 aa5.56□□□□□ -1.52
PTAR1-202ENST00000377200 RANGAP1P46060 587 aaPredicted RBP5.55□□□□□ -1.52
PTAR1-202ENST00000377200 TARBP1Q13395 1621 aaKnown RBP5.55□□□□□ -1.52
PTAR1-202ENST00000377200 PRXQ9BXM0 1461 aa5.55□□□□□ -1.52
PTAR1-202ENST00000377200 RUSC2Q8N2Y8 1516 aa5.54□□□□□ -1.52
PTAR1-202ENST00000377200 MAGI1Q96QZ7 1491 aaPredicted RBP5.54□□□□□ -1.52
PTAR1-202ENST00000377200 IGF1RP08069 1367 aa5.53□□□□□ -1.52
PTAR1-202ENST00000377200 FHAD1B1AJZ9 1412 aa5.53□□□□□ -1.52
PTAR1-202ENST00000377200 PKNOX2Q96KN3 472 aa5.53□□□□□ -1.52
PTAR1-202ENST00000377200 PPM1GO15355 546 aaPredicted RBP5.53□□□□□ -1.52
PTAR1-202ENST00000377200 NOP58Q9Y2X3 529 aaKnown RBP5.53□□□□□ -1.52
PTAR1-202ENST00000377200 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.53□□□□□ -1.52
PTAR1-202ENST00000377200 RBM19Q9Y4C8 960 aaKnown RBP5.53□□□□□ -1.52
PTAR1-202ENST00000377200 TDRD9Q8NDG6 1382 aaKnown RBP5.53□□□□□ -1.52
PTAR1-202ENST00000377200 EFCAB5A4FU69 1503 aa5.52□□□□□ -1.53
PTAR1-202ENST00000377200 CCDC136Q96JN2 1154 aa5.52□□□□□ -1.53
PTAR1-202ENST00000377200 EIF4G3O43432 1585 aaKnown RBP5.52□□□□□ -1.53
PTAR1-202ENST00000377200 CHMP7Q8WUX9 453 aaPredicted RBP5.52□□□□□ -1.53
PTAR1-202ENST00000377200 NAP1L5Q96NT1 182 aaPredicted RBP5.52□□□□□ -1.53
PTAR1-202ENST00000377200 PODXL2Q9NZ53 605 aa5.51□□□□□ -1.53
PTAR1-202ENST00000377200 ADAMTS12P58397 1594 aa5.51□□□□□ -1.53
PTAR1-202ENST00000377200 ITGAEP38570 1179 aa5.51□□□□□ -1.53
PTAR1-202ENST00000377200 TNNT2P45379 298 aaPredicted RBP5.51□□□□□ -1.53
PTAR1-202ENST00000377200 ANP32BQ92688 251 aaKnown RBP5.5□□□□□ -1.53
PTAR1-202ENST00000377200 ANO8Q9HCE9 1232 aaPredicted RBP5.5□□□□□ -1.53
PTAR1-202ENST00000377200 VPS8Q8N3P4 1428 aa5.49□□□□□ -1.53
PTAR1-202ENST00000377200 VSIG10Q8N0Z9 540 aa5.49□□□□□ -1.53
PTAR1-202ENST00000377200 FMN1Q68DA7 1419 aa5.49□□□□□ -1.53
PTAR1-202ENST00000377200 SYNJ2O15056 1496 aa5.49□□□□□ -1.53
PTAR1-202ENST00000377200 AQRO60306 1485 aaKnown RBP eCLIP5.49□□□□□ -1.537e-7■■■■□ 23.2
PTAR1-202ENST00000377200 FBLN2P98095 1184 aa5.49□□□□□ -1.53
PTAR1-202ENST00000377200 IQGAP2Q13576 1575 aa5.49□□□□□ -1.53
PTAR1-202ENST00000377200 DDRGK1Q96HY6 314 aa5.48□□□□□ -1.53
PTAR1-202ENST00000377200 SNAPC4Q5SXM2 1469 aa5.48□□□□□ -1.53
PTAR1-202ENST00000377200 CARMIL2Q6F5E8 1435 aa5.47□□□□□ -1.53
PTAR1-202ENST00000377200 RSPH6AQ9H0K4 717 aa5.47□□□□□ -1.53
PTAR1-202ENST00000377200 HSP90AA1P07900 732 aaKnown RBP5.47□□□□□ -1.53
PTAR1-202ENST00000377200 CDK11BP21127 795 aaKnown RBP5.46□□□□□ -1.53
PTAR1-202ENST00000377200 NCLP19338 710 aaKnown RBP5.46□□□□□ -1.53
PTAR1-202ENST00000377200 GRIN2AQ12879 1464 aa5.46□□□□□ -1.54
PTAR1-202ENST00000377200 POLR3GLQ9BT43 218 aa5.46□□□□□ -1.54
PTAR1-202ENST00000377200 ATP1B4Q9UN42 357 aaPredicted RBP5.46□□□□□ -1.54
PTAR1-202ENST00000377200 ZNF608Q9ULD9 1512 aaPredicted RBP5.45□□□□□ -1.54
PTAR1-202ENST00000377200 KIAA0586Q9BVV6 1533 aa5.45□□□□□ -1.54
PTAR1-202ENST00000377200 HNRNPUQ00839 825 aaKnown RBP eCLIP5.44□□□□□ -1.54
PTAR1-202ENST00000377200 TRIM44Q96DX7 344 aaPredicted RBP5.44□□□□□ -1.54
PTAR1-202ENST00000377200 LAS1LQ9Y4W2 734 aaKnown RBP5.44□□□□□ -1.54
PTAR1-202ENST00000377200 CHD1O14646 1710 aa5.44□□□□□ -1.54
PTAR1-202ENST00000377200 FYCO1Q9BQS8 1478 aa5.44□□□□□ -1.54
PTAR1-202ENST00000377200 UBE2Q2Q8WVN8 375 aa5.43□□□□□ -1.54
PTAR1-202ENST00000377200 HECW1Q76N89 1606 aa5.43□□□□□ -1.54
PTAR1-202ENST00000377200 IRX6P78412 446 aaPredicted RBP5.43□□□□□ -1.54
PTAR1-202ENST00000377200 ARHGAP35Q9NRY4 1499 aa5.43□□□□□ -1.54
PTAR1-202ENST00000377200 CNGB1Q14028 1251 aaPredicted RBP5.43□□□□□ -1.54
PTAR1-202ENST00000377200 PPP4R2Q9NY27 417 aa5.43□□□□□ -1.54
PTAR1-202ENST00000377200 CCDC18Q5T9S5 1454 aa5.43□□□□□ -1.54
PTAR1-202ENST00000377200 TRIM52Q96A61 297 aa5.42□□□□□ -1.54
PTAR1-202ENST00000377200 MAP3K1Q13233 1512 aa5.42□□□□□ -1.54
PTAR1-202ENST00000377200 SAMD9Q5K651 1589 aa5.42□□□□□ -1.54
PTAR1-202ENST00000377200 UGGT2Q9NYU1 1516 aa5.42□□□□□ -1.54
PTAR1-202ENST00000377200 SALL2Q9Y467 1007 aaPredicted RBP5.42□□□□□ -1.54
PTAR1-202ENST00000377200 ARXQ96QS3 562 aa5.42□□□□□ -1.54
PTAR1-202ENST00000377200 ARAP1Q96P48 1450 aa5.41□□□□□ -1.54
PTAR1-202ENST00000377200 CASKIN1Q8WXD9 1431 aa5.41□□□□□ -1.54
PTAR1-202ENST00000377200 CFAP43Q8NDM7 1665 aa5.41□□□□□ -1.54
PTAR1-202ENST00000377200 L1TD1Q5T7N2 865 aaKnown RBP5.41□□□□□ -1.54
PTAR1-202ENST00000377200 MTUS2Q5JR59 1369 aa5.4□□□□□ -1.55
PTAR1-202ENST00000377200 P3H3Q8IVL6 736 aa5.4□□□□□ -1.55
PTAR1-202ENST00000377200 FHOD3Q2V2M9 1422 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms