RNA–Protein interactions for RNA: ENST00000377200.9

PTAR1-202, Transcript of protein prenyltransferase alpha subunit repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene PTAR1, Length 9,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTAR1-202ENST00000377200 NISCHQ9Y2I1 1504 aa7.89□□□□□ -1.15
PTAR1-202ENST00000377200 CCDC180Q9P1Z9 1646 aa7□□□□□ -1.29
PTAR1-202ENST00000377200 PELP1Q8IZL8 1130 aaKnown RBP6.92□□□□□ -1.3
PTAR1-202ENST00000377200 MYT1Q01538 1121 aa6.9□□□□□ -1.3
PTAR1-202ENST00000377200 ZCCHC6Q5VYS8 1495 aaKnown RBP6.61□□□□□ -1.35
PTAR1-202ENST00000377200 DCAF8L2P0C7V8 631 aa6.59□□□□□ -1.35
PTAR1-202ENST00000377200 DCAF1Q9Y4B6 1507 aa6.57□□□□□ -1.36
PTAR1-202ENST00000377200 ABCC9O60706 1549 aa6.52□□□□□ -1.37
PTAR1-202ENST00000377200 MYO15BQ96JP2 1530 aa6.52□□□□□ -1.37
PTAR1-202ENST00000377200 NACADO15069 1562 aa6.51□□□□□ -1.37
PTAR1-202ENST00000377200 RB1CC1Q8TDY2 1594 aa6.47□□□□□ -1.37
PTAR1-202ENST00000377200 CENPBP07199 599 aaPredicted RBP6.41□□□□□ -1.38
PTAR1-202ENST00000377200 SHROOM4Q9ULL8 1493 aa6.39□□□□□ -1.39
PTAR1-202ENST00000377200 TTBK1Q5TCY1 1321 aaPredicted RBP6.36□□□□□ -1.39
PTAR1-202ENST00000377200 HRCP23327 699 aa6.35□□□□□ -1.39
PTAR1-202ENST00000377200 SCRIBQ14160 1630 aa6.35□□□□□ -1.39
PTAR1-202ENST00000377200 ERICH6Q7L0X2 663 aa6.33□□□□□ -1.4
PTAR1-202ENST00000377200 ZEB1P37275 1124 aaPredicted RBP6.32□□□□□ -1.4
PTAR1-202ENST00000377200 PCGF6Q9BYE7 350 aa6.31□□□□□ -1.4
PTAR1-202ENST00000377200 UNC13AQ9UPW8 1703 aa6.27□□□□□ -1.41
PTAR1-202ENST00000377200 CCER1Q8TC90 406 aaPredicted RBP6.24□□□□□ -1.41
PTAR1-202ENST00000377200 SUPT5HO00267 1087 aaKnown RBP6.22□□□□□ -1.41
PTAR1-202ENST00000377200 BAZ1AQ9NRL2 1556 aaPredicted RBP6.17□□□□□ -1.42
PTAR1-202ENST00000377200 PPARGC1BQ86YN6 1023 aaKnown RBP6.14□□□□□ -1.43
PTAR1-202ENST00000377200 YTHDC1Q96MU7 727 aaKnown RBP6.13□□□□□ -1.43
PTAR1-202ENST00000377200 PABPN1Q86U42 306 aaKnown RBP eCLIP6.11□□□□□ -1.43
PTAR1-202ENST00000377200 BICRAQ9NZM4 1560 aa6.11□□□□□ -1.43
PTAR1-202ENST00000377200 SMARCA4P51532 1647 aa6.1□□□□□ -1.43
PTAR1-202ENST00000377200 SMARCA2P51531 1590 aa6.07□□□□□ -1.44
PTAR1-202ENST00000377200 RSF1Q96T23 1441 aaPredicted RBP6.07□□□□□ -1.44
PTAR1-202ENST00000377200 GTF3C3Q9Y5Q9 886 aa6.07□□□□□ -1.44
PTAR1-202ENST00000377200 NEFLP07196 543 aa6.06□□□□□ -1.44
PTAR1-202ENST00000377200 ACIN1Q9UKV3 1341 aaKnown RBP6.04□□□□□ -1.44
PTAR1-202ENST00000377200 CECR2Q9BXF3 1484 aa6.04□□□□□ -1.44
PTAR1-202ENST00000377200 MROH2BQ7Z745 1585 aa6.04□□□□□ -1.44
PTAR1-202ENST00000377200 WIZO95785 1651 aa6.02□□□□□ -1.44
PTAR1-202ENST00000377200 TRIM26Q12899 539 aaPredicted RBP6.02□□□□□ -1.45
PTAR1-202ENST00000377200 TOP2AP11388 1531 aaKnown RBP6.02□□□□□ -1.45
PTAR1-202ENST00000377200 PEG3Q9GZU2 1588 aa6.01□□□□□ -1.45
PTAR1-202ENST00000377200 BAZ1BQ9UIG0 1483 aaKnown RBP6.01□□□□□ -1.45
PTAR1-202ENST00000377200 EIF4G1Q04637 1599 aaKnown RBP6.01□□□□□ -1.45
PTAR1-202ENST00000377200 SCAF1Q9H7N4 1312 aaKnown RBP5.98□□□□□ -1.45
PTAR1-202ENST00000377200 HMGXB3Q12766 1538 aa5.97□□□□□ -1.45
PTAR1-202ENST00000377200 RTL5Q5HYW3 569 aaPredicted RBP5.96□□□□□ -1.46
PTAR1-202ENST00000377200 ATAD2BQ9ULI0 1458 aa5.96□□□□□ -1.46
PTAR1-202ENST00000377200 BCL11AQ9H165 835 aa5.95□□□□□ -1.46
PTAR1-202ENST00000377200 EHMT2Q96KQ7 1210 aa5.94□□□□□ -1.46
PTAR1-202ENST00000377200 NCAPD3P42695 1498 aa5.93□□□□□ -1.46
PTAR1-202ENST00000377200 CC2D2AQ9P2K1 1620 aa5.92□□□□□ -1.46
PTAR1-202ENST00000377200 DIEXFQ68CQ4 756 aaKnown RBP5.92□□□□□ -1.46
PTAR1-202ENST00000377200 ANP32EQ9BTT0 268 aa5.91□□□□□ -1.46
PTAR1-202ENST00000377200 PRDM2Q13029 1718 aa5.9□□□□□ -1.46
PTAR1-202ENST00000377200 MYT1LQ9UL68 1186 aa5.9□□□□□ -1.46
PTAR1-202ENST00000377200 CCDC88BA6NC98 1476 aa5.89□□□□□ -1.47
PTAR1-202ENST00000377200 TRIM41Q8WV44 630 aa5.89□□□□□ -1.47
PTAR1-202ENST00000377200 CHIC1Q5VXU3 224 aa5.87□□□□□ -1.47
PTAR1-202ENST00000377200 NEUROD1Q13562 356 aa5.86□□□□□ -1.47
PTAR1-202ENST00000377200 GLIPR1L2Q4G1C9 344 aa5.86□□□□□ -1.47
PTAR1-202ENST00000377200 APLP2Q06481 763 aa5.86□□□□□ -1.47
PTAR1-202ENST00000377200 FAM9AQ8IZU1 332 aaPredicted RBP5.85□□□□□ -1.47
PTAR1-202ENST00000377200 CLSPNQ9HAW4 1339 aa5.84□□□□□ -1.47
PTAR1-202ENST00000377200 EIF5BO60841 1220 aaKnown RBP5.84□□□□□ -1.48
PTAR1-202ENST00000377200 BCANQ96GW7 911 aa5.83□□□□□ -1.48
PTAR1-202ENST00000377200 DAXXQ9UER7 740 aaPredicted RBP5.82□□□□□ -1.48
PTAR1-202ENST00000377200 LAMC3Q9Y6N6 1575 aa5.8□□□□□ -1.48
PTAR1-202ENST00000377200 CADPSQ9ULU8 1353 aa5.8□□□□□ -1.48
PTAR1-202ENST00000377200 WRNQ14191 1432 aaPredicted RBP eCLIP5.8□□□□□ -1.48
PTAR1-202ENST00000377200 CFTRP13569 1480 aa5.79□□□□□ -1.48
PTAR1-202ENST00000377200 EEA1Q15075 1411 aa5.79□□□□□ -1.48
PTAR1-202ENST00000377200 CDK11AQ9UQ88 783 aaPredicted RBP5.79□□□□□ -1.48
PTAR1-202ENST00000377200 PDS5BQ9NTI5 1447 aa5.78□□□□□ -1.48
PTAR1-202ENST00000377200 ABCC8Q09428 1581 aa5.78□□□□□ -1.48
PTAR1-202ENST00000377200 PRKCSHP14314 528 aaPredicted RBP5.76□□□□□ -1.49
PTAR1-202ENST00000377200 ZNF316A6NFI3 1004 aaPredicted RBP5.75□□□□□ -1.49
PTAR1-202ENST00000377200 TOP2BQ02880 1626 aa5.75□□□□□ -1.49
PTAR1-202ENST00000377200 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.75□□□□□ -1.49
PTAR1-202ENST00000377200 CEP164Q9UPV0 1460 aa5.75□□□□□ -1.49
PTAR1-202ENST00000377200 BIVM-ERCC5R4GMW8 1640 aa5.74□□□□□ -1.49
PTAR1-202ENST00000377200 FANCD2Q9BXW9 1451 aa5.74□□□□□ -1.49
PTAR1-202ENST00000377200 ERCC6Q03468 1493 aa5.72□□□□□ -1.49
PTAR1-202ENST00000377200 DNMBPQ6XZF7 1577 aa5.71□□□□□ -1.49
PTAR1-202ENST00000377200 LOC105371045A0A1W2PR82 267 aa5.71□□□□□ -1.5
PTAR1-202ENST00000377200 KIF27Q86VH2 1401 aa5.7□□□□□ -1.5
PTAR1-202ENST00000377200 SYNJ1O43426 1573 aa5.7□□□□□ -1.5
PTAR1-202ENST00000377200 KIF21AQ7Z4S6 1674 aa5.69□□□□□ -1.5
PTAR1-202ENST00000377200 CSRNP3Q8WYN3 585 aa5.69□□□□□ -1.5
PTAR1-202ENST00000377200 ANP32AP39687 249 aaKnown RBP5.69□□□□□ -1.5
PTAR1-202ENST00000377200 FKBP8Q14318 412 aa5.67□□□□□ -1.5
PTAR1-202ENST00000377200 UBTFP17480 764 aaKnown RBP5.67□□□□□ -1.5
PTAR1-202ENST00000377200 MRC2Q9UBG0 1479 aa5.67□□□□□ -1.5
PTAR1-202ENST00000377200 CUX1P39880 1505 aa5.67□□□□□ -1.5
PTAR1-202ENST00000377200 GOLGA3Q08378 1498 aa5.66□□□□□ -1.5
PTAR1-202ENST00000377200 NESP48681 1621 aa5.66□□□□□ -1.5
PTAR1-202ENST00000377200 TOPBP1Q92547 1522 aa5.66□□□□□ -1.5
PTAR1-202ENST00000377200 FGD5Q6ZNL6 1462 aa5.65□□□□□ -1.5
PTAR1-202ENST00000377200 KIF21BO75037 1637 aa5.65□□□□□ -1.5
PTAR1-202ENST00000377200 WDR97A6NE52 1622 aa5.65□□□□□ -1.51
PTAR1-202ENST00000377200 NBR1Q14596 966 aa5.64□□□□□ -1.51
PTAR1-202ENST00000377200 CUX2O14529 1486 aa5.64□□□□□ -1.51
PTAR1-202ENST00000377200 CUL7Q14999 1698 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms