RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 SHROOM2Q13796 1616 aa37.95■■■■□ 3.67
YIF1A-202ENST00000376899 KIAA0586Q9BVV6 1533 aa37.88■■■■□ 3.65
YIF1A-202ENST00000376899 CSRNP3Q8WYN3 585 aa37.88■■■■□ 3.65
YIF1A-202ENST00000376899 ARAP1Q96P48 1450 aa37.77■■■■□ 3.64
YIF1A-202ENST00000376899 ERCC6L2Q5T890 1561 aa37.74■■■■□ 3.63
YIF1A-202ENST00000376899 JPH4Q96JJ6 628 aa37.73■■■■□ 3.63
YIF1A-202ENST00000376899 IQGAP2Q13576 1575 aa37.72■■■■□ 3.63
YIF1A-202ENST00000376899 CTTNBP2Q8WZ74 1663 aa37.7■■■■□ 3.63
YIF1A-202ENST00000376899 FAM9AQ8IZU1 332 aaPredicted RBP37.7■■■■□ 3.63
YIF1A-202ENST00000376899 PRG4Q92954 1404 aaPredicted RBP37.68■■■■□ 3.62
YIF1A-202ENST00000376899 KIF21BO75037 1637 aa37.67■■■■□ 3.62
YIF1A-202ENST00000376899 CYB5RLQ6IPT4 315 aa37.55■■■■□ 3.6
YIF1A-202ENST00000376899 UGGT2Q9NYU1 1516 aa37.55■■■■□ 3.6
YIF1A-202ENST00000376899 DISP1Q96F81 1524 aa37.44■■■■□ 3.58
YIF1A-202ENST00000376899 CARMIL2Q6F5E8 1435 aa37.43■■■■□ 3.58
YIF1A-202ENST00000376899 GOLGA3Q08378 1498 aa37.4■■■■□ 3.58
YIF1A-202ENST00000376899 KIAA0556O60303 1618 aa37.38■■■■□ 3.57
YIF1A-202ENST00000376899 TNIKQ9UKE5 1360 aa37.31■■■■□ 3.56
YIF1A-202ENST00000376899 PTPRGP23470 1445 aa37.24■■■■□ 3.55
YIF1A-202ENST00000376899 SAMD9Q5K651 1589 aa37.23■■■■□ 3.55
YIF1A-202ENST00000376899 UBTFP17480 764 aaKnown RBP37.15■■■■□ 3.54
YIF1A-202ENST00000376899 ADCY10Q96PN6 1610 aa37.14■■■■□ 3.54
YIF1A-202ENST00000376899 EHMT2Q96KQ7 1210 aa37.14■■■■□ 3.54
YIF1A-202ENST00000376899 EFCAB5A4FU69 1503 aa37.08■■■■□ 3.53
YIF1A-202ENST00000376899 UHRF1BP1LA0JNW5 1464 aa37.04■■■■□ 3.52
YIF1A-202ENST00000376899 UACAQ9BZF9 1416 aa37.03■■■■□ 3.52
YIF1A-202ENST00000376899 TTBK1Q5TCY1 1321 aaPredicted RBP37.03■■■■□ 3.52
YIF1A-202ENST00000376899 ABCC2Q92887 1545 aa37■■■■□ 3.51
YIF1A-202ENST00000376899 ABCA8O94911 1581 aa36.96■■■■□ 3.51
YIF1A-202ENST00000376899 P3H3Q8IVL6 736 aa36.96■■■■□ 3.51
YIF1A-202ENST00000376899 RANGAP1P46060 587 aaPredicted RBP36.94■■■■□ 3.5
YIF1A-202ENST00000376899 PLB1Q6P1J6 1458 aa36.93■■■■□ 3.5
YIF1A-202ENST00000376899 FHOD3Q2V2M9 1422 aa36.92■■■■□ 3.5
YIF1A-202ENST00000376899 ARHGAP35Q9NRY4 1499 aa36.9■■■■□ 3.5
YIF1A-202ENST00000376899 MAPKBP1O60336 1514 aa36.88■■■■□ 3.49
YIF1A-202ENST00000376899 KDM5BQ9UGL1 1544 aa36.85■■■■□ 3.49
YIF1A-202ENST00000376899 NPM1P06748 294 aaKnown RBP eCLIP36.85■■■■□ 3.49
YIF1A-202ENST00000376899 ZCCHC11Q5TAX3 1644 aaKnown RBP36.79■■■■□ 3.48
YIF1A-202ENST00000376899 RAPGEF6Q8TEU7 1601 aa36.79■■■■□ 3.48
YIF1A-202ENST00000376899 CLIP1P30622 1438 aa36.7■■■■□ 3.47
YIF1A-202ENST00000376899 TRHP20396 242 aaPredicted RBP36.68■■■■□ 3.46
YIF1A-202ENST00000376899 FMN1Q68DA7 1419 aa36.68■■■■□ 3.46
YIF1A-202ENST00000376899 KIF13AQ9H1H9 1805 aa36.66■■■■□ 3.46
YIF1A-202ENST00000376899 LOC105371045A0A1W2PR82 267 aa36.66■■■■□ 3.46
YIF1A-202ENST00000376899 ASXL2Q76L83 1435 aa36.66■■■■□ 3.46
YIF1A-202ENST00000376899 ABCC10Q5T3U5 1492 aa36.65■■■■□ 3.46
YIF1A-202ENST00000376899 NUP153P49790 1475 aaKnown RBP36.64■■■■□ 3.46
YIF1A-202ENST00000376899 DIP2BQ9P265 1576 aa36.63■■■■□ 3.45
YIF1A-202ENST00000376899 ATP10BO94823 1461 aa36.61■■■■□ 3.45
YIF1A-202ENST00000376899 CEP162Q5TB80 1403 aa36.6■■■■□ 3.45
YIF1A-202ENST00000376899 HECW1Q76N89 1606 aa36.53■■■■□ 3.44
YIF1A-202ENST00000376899 WDR7Q9Y4E6 1490 aa36.53■■■■□ 3.44
YIF1A-202ENST00000376899 GLI2P10070 1586 aa36.49■■■■□ 3.43
YIF1A-202ENST00000376899 EPRSP07814 1512 aaKnown RBP36.47■■■■□ 3.43
YIF1A-202ENST00000376899 PCF11O94913 1555 aaKnown RBP36.46■■■■□ 3.43
YIF1A-202ENST00000376899 ARID3CA6NKF2 412 aa36.45■■■■□ 3.43
YIF1A-202ENST00000376899 FAM69CQ0P6D2 419 aa36.45■■■■□ 3.43
YIF1A-202ENST00000376899 CASKIN1Q8WXD9 1431 aa36.43■■■■□ 3.42
YIF1A-202ENST00000376899 CDK13Q14004 1512 aaKnown RBP36.39■■■■□ 3.42
YIF1A-202ENST00000376899 LRRIQ1Q96JM4 1722 aa36.39■■■■□ 3.42
YIF1A-202ENST00000376899 FYCO1Q9BQS8 1478 aa36.38■■■■□ 3.41
YIF1A-202ENST00000376899 MAP3K4Q9Y6R4 1608 aa36.33■■■■□ 3.41
YIF1A-202ENST00000376899 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.31■■■■□ 3.4
YIF1A-202ENST00000376899 HNRNPUL2Q1KMD3 747 aaKnown RBP36.31■■■■□ 3.4
YIF1A-202ENST00000376899 ATP1B4Q9UN42 357 aaPredicted RBP36.28■■■■□ 3.4
YIF1A-202ENST00000376899 CCDC18Q5T9S5 1454 aa36.28■■■■□ 3.4
YIF1A-202ENST00000376899 CFAP43Q8NDM7 1665 aa36.26■■■■□ 3.4
YIF1A-202ENST00000376899 TSPOAP1O95153 1857 aa36.26■■■■□ 3.39
YIF1A-202ENST00000376899 PPRC1Q5VV67 1664 aaKnown RBP36.26■■■■□ 3.39
YIF1A-202ENST00000376899 PLEKHD1A6NEE1 506 aa36.23■■■■□ 3.39
YIF1A-202ENST00000376899 KCNH8Q96L42 1107 aa36.23■■■■□ 3.39
YIF1A-202ENST00000376899 ABCA9Q8IUA7 1624 aa36.22■■■■□ 3.39
YIF1A-202ENST00000376899 VPS8Q8N3P4 1428 aa36.17■■■■□ 3.38
YIF1A-202ENST00000376899 CDK11AQ9UQ88 783 aaPredicted RBP36.14■■■■□ 3.38
YIF1A-202ENST00000376899 CD109Q6YHK3 1445 aa36.12■■■■□ 3.37
YIF1A-202ENST00000376899 MAGI3Q5TCQ9 1506 aa36.12■■■■□ 3.37
YIF1A-202ENST00000376899 TROQ12816 1431 aaPredicted RBP36.11■■■■□ 3.37
YIF1A-202ENST00000376899 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.08■■■■□ 3.371e-7■■■■□ 23.3
YIF1A-202ENST00000376899 TEX14Q8IWB6 1497 aa36.08■■■■□ 3.37
YIF1A-202ENST00000376899 TTC37Q6PGP7 1564 aa36.04■■■■□ 3.36
YIF1A-202ENST00000376899 KIF14Q15058 1648 aa36.03■■■■□ 3.36
YIF1A-202ENST00000376899 KDM6BO15054 1643 aa35.94■■■■□ 3.34
YIF1A-202ENST00000376899 TIAM1Q13009 1591 aa35.93■■■■□ 3.34
YIF1A-202ENST00000376899 MAP3K1Q13233 1512 aa35.89■■■■□ 3.34
YIF1A-202ENST00000376899 MYO5CQ9NQX4 1742 aa35.89■■■■□ 3.34
YIF1A-202ENST00000376899 EHBP1L1Q8N3D4 1523 aa35.88■■■■□ 3.33
YIF1A-202ENST00000376899 NEO1Q92859 1461 aa35.86■■■■□ 3.33
YIF1A-202ENST00000376899 ARAP3Q8WWN8 1544 aa35.86■■■■□ 3.33
YIF1A-202ENST00000376899 MTUS2Q5JR59 1369 aa35.86■■■■□ 3.33
YIF1A-202ENST00000376899 PLCH2O75038 1416 aa35.84■■■■□ 3.33
YIF1A-202ENST00000376899 PHLDB1Q86UU1 1377 aa35.84■■■■□ 3.33
YIF1A-202ENST00000376899 CFAP74Q9C0B2 1584 aa35.84■■■■□ 3.33
YIF1A-202ENST00000376899 COL17A1Q9UMD9 1497 aaPredicted RBP35.82■■■■□ 3.32
YIF1A-202ENST00000376899 FANCAO15360 1455 aa35.79■■■■□ 3.32
YIF1A-202ENST00000376899 PREX2Q70Z35 1606 aa35.78■■■■□ 3.32
YIF1A-202ENST00000376899 CDC42BPAQ5VT25 1732 aa35.76■■■■□ 3.31
YIF1A-202ENST00000376899 CDC42BPBQ9Y5S2 1711 aa35.75■■■■□ 3.31
YIF1A-202ENST00000376899 LRRC9Q6ZRR7 1453 aa35.74■■■■□ 3.31
YIF1A-202ENST00000376899 AKNAQ7Z591 1439 aa35.71■■■■□ 3.31
YIF1A-202ENST00000376899 SUPT6HQ7KZ85 1726 aaKnown RBP35.71■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms