RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 NISCHQ9Y2I1 1504 aa54.85■■■■■ 6.37
YIF1A-202ENST00000376899 CCDC180Q9P1Z9 1646 aa48.75■■■■■ 5.39
YIF1A-202ENST00000376899 ABCC9O60706 1549 aa47.31■■■■■ 5.16
YIF1A-202ENST00000376899 ZCCHC6Q5VYS8 1495 aaKnown RBP45.78■■■■■ 4.92
YIF1A-202ENST00000376899 NACADO15069 1562 aa45.72■■■■■ 4.91
YIF1A-202ENST00000376899 RB1CC1Q8TDY2 1594 aa45.7■■■■■ 4.91
YIF1A-202ENST00000376899 MYO15BQ96JP2 1530 aa45.58■■■■■ 4.89
YIF1A-202ENST00000376899 DCAF8L2P0C7V8 631 aa45.49■■■■■ 4.87
YIF1A-202ENST00000376899 DCAF1Q9Y4B6 1507 aa45.47■■■■■ 4.87
YIF1A-202ENST00000376899 UNC13AQ9UPW8 1703 aa44.73■■■■■ 4.75
YIF1A-202ENST00000376899 SCRIBQ14160 1630 aa44.39■■■■■ 4.7
YIF1A-202ENST00000376899 BICRAQ9NZM4 1560 aa44.35■■■■■ 4.69
YIF1A-202ENST00000376899 PABPN1Q86U42 306 aaKnown RBP eCLIP44.18■■■■■ 4.66
YIF1A-202ENST00000376899 SHROOM4Q9ULL8 1493 aa43.94■■■■■ 4.62
YIF1A-202ENST00000376899 DNAJC5BQ9UF47 199 aa43.18■■■■■ 4.5
YIF1A-202ENST00000376899 EIF4G1Q04637 1599 aaKnown RBP43.12■■■■■ 4.49
YIF1A-202ENST00000376899 CC2D2AQ9P2K1 1620 aa42.87■■■■■ 4.45
YIF1A-202ENST00000376899 CECR2Q9BXF3 1484 aa42.67■■■■■ 4.42
YIF1A-202ENST00000376899 SMARCA4P51532 1647 aa42.53■■■■■ 4.4
YIF1A-202ENST00000376899 BAZ1AQ9NRL2 1556 aaPredicted RBP42.51■■■■■ 4.4
YIF1A-202ENST00000376899 MROH2BQ7Z745 1585 aa42.27■■■■■ 4.36
YIF1A-202ENST00000376899 ATAD2BQ9ULI0 1458 aa42.21■■■■■ 4.35
YIF1A-202ENST00000376899 SMARCA2P51531 1590 aa42.2■■■■■ 4.35
YIF1A-202ENST00000376899 PEG3Q9GZU2 1588 aa42.17■■■■■ 4.34
YIF1A-202ENST00000376899 NCAPD3P42695 1498 aa42.17■■■■■ 4.34
YIF1A-202ENST00000376899 HMGXB3Q12766 1538 aa42.02■■■■■ 4.32
YIF1A-202ENST00000376899 RSF1Q96T23 1441 aaPredicted RBP41.86■■■■■ 4.29
YIF1A-202ENST00000376899 BAZ1BQ9UIG0 1483 aaKnown RBP41.85■■■■■ 4.29
YIF1A-202ENST00000376899 WIZO95785 1651 aa41.83■■■■■ 4.29
YIF1A-202ENST00000376899 TOP2AP11388 1531 aaKnown RBP41.43■■■■■ 4.22
YIF1A-202ENST00000376899 NESP48681 1621 aa41.04■■■■■ 4.16
YIF1A-202ENST00000376899 LAMC3Q9Y6N6 1575 aa41.03■■■■■ 4.16
YIF1A-202ENST00000376899 CADPSQ9ULU8 1353 aa40.91■■■■■ 4.14
YIF1A-202ENST00000376899 CCDC88BA6NC98 1476 aa40.88■■■■■ 4.13
YIF1A-202ENST00000376899 SUPT5HO00267 1087 aaKnown RBP40.81■■■■■ 4.12
YIF1A-202ENST00000376899 CFTRP13569 1480 aa40.76■■■■■ 4.12
YIF1A-202ENST00000376899 ERCC6Q03468 1493 aa40.75■■■■■ 4.11
YIF1A-202ENST00000376899 PDS5BQ9NTI5 1447 aa40.68■■■■■ 4.1
YIF1A-202ENST00000376899 KIF21AQ7Z4S6 1674 aa40.62■■■■■ 4.09
YIF1A-202ENST00000376899 PRDM2Q13029 1718 aa40.56■■■■■ 4.08
YIF1A-202ENST00000376899 THOC2Q8NI27 1593 aaKnown RBP40.46■■■■■ 4.07
YIF1A-202ENST00000376899 FANCD2Q9BXW9 1451 aa40.45■■■■■ 4.07
YIF1A-202ENST00000376899 CEP164Q9UPV0 1460 aa40.39■■■■■ 4.06
YIF1A-202ENST00000376899 CUX2O14529 1486 aa40.32■■■■■ 4.05
YIF1A-202ENST00000376899 MRC2Q9UBG0 1479 aa40.29■■■■■ 4.04
YIF1A-202ENST00000376899 WDR62O43379 1518 aa40.19■■■■■ 4.02
YIF1A-202ENST00000376899 URB2Q14146 1524 aaKnown RBP40.06■■■■■ 4
YIF1A-202ENST00000376899 ABCC8Q09428 1581 aa39.87■■■■□ 3.97
YIF1A-202ENST00000376899 TOPBP1Q92547 1522 aa39.86■■■■□ 3.97
YIF1A-202ENST00000376899 DNMBPQ6XZF7 1577 aa39.84■■■■□ 3.97
YIF1A-202ENST00000376899 CUX1P39880 1505 aa39.65■■■■□ 3.94
YIF1A-202ENST00000376899 IFT140Q96RY7 1462 aa39.54■■■■□ 3.92
YIF1A-202ENST00000376899 POLA1P09884 1462 aaPredicted RBP39.53■■■■□ 3.92
YIF1A-202ENST00000376899 FGD5Q6ZNL6 1462 aa39.45■■■■□ 3.91
YIF1A-202ENST00000376899 WRNQ14191 1432 aaPredicted RBP eCLIP39.44■■■■□ 3.9
YIF1A-202ENST00000376899 TARBP1Q13395 1621 aaKnown RBP39.43■■■■□ 3.9
YIF1A-202ENST00000376899 BIVM-ERCC5R4GMW8 1640 aa39.42■■■■□ 3.9
YIF1A-202ENST00000376899 TOP2BQ02880 1626 aa39.39■■■■□ 3.9
YIF1A-202ENST00000376899 SYNJ1O43426 1573 aa39.38■■■■□ 3.89
YIF1A-202ENST00000376899 SOGA1O94964 1423 aa39.31■■■■□ 3.88
YIF1A-202ENST00000376899 ZNF608Q9ULD9 1512 aaPredicted RBP39.31■■■■□ 3.88
YIF1A-202ENST00000376899 RAD54L2Q9Y4B4 1467 aa39.3■■■■□ 3.88
YIF1A-202ENST00000376899 WDR97A6NE52 1622 aa39.22■■■■□ 3.87
YIF1A-202ENST00000376899 EIF4G3O43432 1585 aaKnown RBP39.22■■■■□ 3.87
YIF1A-202ENST00000376899 ABCA10Q8WWZ4 1543 aa39.12■■■■□ 3.85
YIF1A-202ENST00000376899 AQRO60306 1485 aaKnown RBP eCLIP39.09■■■■□ 3.85
YIF1A-202ENST00000376899 TDRD9Q8NDG6 1382 aaKnown RBP39.04■■■■□ 3.84
YIF1A-202ENST00000376899 ABCA5Q8WWZ7 1642 aa38.97■■■■□ 3.83
YIF1A-202ENST00000376899 GAPVD1Q14C86 1478 aa38.9■■■■□ 3.82
YIF1A-202ENST00000376899 PBRM1Q86U86 1689 aa38.87■■■■□ 3.81
YIF1A-202ENST00000376899 GRIN2BQ13224 1484 aa38.87■■■■□ 3.81
YIF1A-202ENST00000376899 SNAPC4Q5SXM2 1469 aa38.78■■■■□ 3.8
YIF1A-202ENST00000376899 MAGI1Q96QZ7 1491 aaPredicted RBP38.77■■■■□ 3.8
YIF1A-202ENST00000376899 DNAJC5Q9H3Z4 198 aa38.72■■■■□ 3.79
YIF1A-202ENST00000376899 CHD1O14646 1710 aa38.69■■■■□ 3.78
YIF1A-202ENST00000376899 ERICH3Q5RHP9 1530 aa38.66■■■■□ 3.78
YIF1A-202ENST00000376899 KIF27Q86VH2 1401 aa38.6■■■■□ 3.77
YIF1A-202ENST00000376899 SYNJ2O15056 1496 aa38.6■■■■□ 3.77
YIF1A-202ENST00000376899 OSCARQ8IYS5 282 aa38.58■■■■□ 3.77
YIF1A-202ENST00000376899 ADAMTS12P58397 1594 aa38.57■■■■□ 3.76
YIF1A-202ENST00000376899 TRIM41Q8WV44 630 aa38.56■■■■□ 3.76
YIF1A-202ENST00000376899 FHAD1B1AJZ9 1412 aa38.46■■■■□ 3.75
YIF1A-202ENST00000376899 FBLN2P98095 1184 aa38.46■■■■□ 3.75
YIF1A-202ENST00000376899 CHMP7Q8WUX9 453 aaPredicted RBP38.46■■■■□ 3.75
YIF1A-202ENST00000376899 IGF1RP08069 1367 aa38.4■■■■□ 3.74
YIF1A-202ENST00000376899 GRIN2AQ12879 1464 aa38.38■■■■□ 3.73
YIF1A-202ENST00000376899 CUL7Q14999 1698 aa38.37■■■■□ 3.73
YIF1A-202ENST00000376899 RUSC2Q8N2Y8 1516 aa38.31■■■■□ 3.72
YIF1A-202ENST00000376899 CLASP1Q7Z460 1538 aa38.29■■■■□ 3.72
YIF1A-202ENST00000376899 CHIC1Q5VXU3 224 aa38.29■■■■□ 3.72
YIF1A-202ENST00000376899 NUP160Q12769 1436 aa38.22■■■■□ 3.71
YIF1A-202ENST00000376899 CEP170Q5SW79 1584 aa38.2■■■■□ 3.71
YIF1A-202ENST00000376899 CARMIL1Q5VZK9 1371 aa38.18■■■■□ 3.7
YIF1A-202ENST00000376899 ARHGEF11O15085 1522 aa38.05■■■■□ 3.68
YIF1A-202ENST00000376899 RIMBP3CA6NJZ7 1639 aa38.05■■■■□ 3.68
YIF1A-202ENST00000376899 RIMBP3BA6NNM3 1639 aa38.05■■■■□ 3.68
YIF1A-202ENST00000376899 RIMBP3Q9UFD9 1639 aa38.05■■■■□ 3.68
YIF1A-202ENST00000376899 EEA1Q15075 1411 aa38.04■■■■□ 3.68
YIF1A-202ENST00000376899 RAPGEF2Q9Y4G8 1499 aa38■■■■□ 3.67
YIF1A-202ENST00000376899 PRXQ9BXM0 1461 aa37.96■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms