RNA–Protein interactions for RNA: ENST00000375635.6

C6orf48-202, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-202ENST00000375635 RAPGEF2Q9Y4G8 1499 aa22.46■■□□□ 1.19
C6orf48-202ENST00000375635 PRXQ9BXM0 1461 aa22.45■■□□□ 1.18
C6orf48-202ENST00000375635 ERCC6L2Q5T890 1561 aa22.45■■□□□ 1.18
C6orf48-202ENST00000375635 KIAA0586Q9BVV6 1533 aa22.44■■□□□ 1.18
C6orf48-202ENST00000375635 JPH4Q96JJ6 628 aa22.4■■□□□ 1.18
C6orf48-202ENST00000375635 EEA1Q15075 1411 aa22.39■■□□□ 1.17
C6orf48-202ENST00000375635 CYB5RLQ6IPT4 315 aa22.38■■□□□ 1.17
C6orf48-202ENST00000375635 CSRNP3Q8WYN3 585 aa22.38■■□□□ 1.17
C6orf48-202ENST00000375635 PRG4Q92954 1404 aaPredicted RBP22.35■■□□□ 1.17
C6orf48-202ENST00000375635 IQGAP2Q13576 1575 aa22.29■■□□□ 1.16
C6orf48-202ENST00000375635 FAM9AQ8IZU1 332 aaPredicted RBP22.28■■□□□ 1.16
C6orf48-202ENST00000375635 CTTNBP2Q8WZ74 1663 aa22.24■■□□□ 1.15
C6orf48-202ENST00000375635 UGGT2Q9NYU1 1516 aa22.22■■□□□ 1.15
C6orf48-202ENST00000375635 DISP1Q96F81 1524 aa22.2■■□□□ 1.14
C6orf48-202ENST00000375635 KIF21BO75037 1637 aa22.2■■□□□ 1.14
C6orf48-202ENST00000375635 CARMIL2Q6F5E8 1435 aa22.13■■□□□ 1.13
C6orf48-202ENST00000375635 KIAA0556O60303 1618 aa22.1■■□□□ 1.13
C6orf48-202ENST00000375635 TNIKQ9UKE5 1360 aa22.1■■□□□ 1.13
C6orf48-202ENST00000375635 PTPRGP23470 1445 aa22.07■■□□□ 1.12
C6orf48-202ENST00000375635 ADCY10Q96PN6 1610 aa22.04■■□□□ 1.12
C6orf48-202ENST00000375635 GOLGA3Q08378 1498 aa22.03■■□□□ 1.12
C6orf48-202ENST00000375635 SAMD9Q5K651 1589 aa22■■□□□ 1.11
C6orf48-202ENST00000375635 TTBK1Q5TCY1 1321 aaPredicted RBP21.98■■□□□ 1.11
C6orf48-202ENST00000375635 EHMT2Q96KQ7 1210 aa21.96■■□□□ 1.11
C6orf48-202ENST00000375635 UACAQ9BZF9 1416 aa21.95■■□□□ 1.1
C6orf48-202ENST00000375635 UHRF1BP1LA0JNW5 1464 aa21.95■■□□□ 1.1
C6orf48-202ENST00000375635 UBTFP17480 764 aaKnown RBP21.92■■□□□ 1.1
C6orf48-202ENST00000375635 ABCC2Q92887 1545 aa21.91■■□□□ 1.1
C6orf48-202ENST00000375635 P3H3Q8IVL6 736 aa21.9■■□□□ 1.1
C6orf48-202ENST00000375635 ABCA8O94911 1581 aa21.9■■□□□ 1.1
C6orf48-202ENST00000375635 PLB1Q6P1J6 1458 aa21.9■■□□□ 1.1
C6orf48-202ENST00000375635 MAPKBP1O60336 1514 aa21.87■■□□□ 1.09
C6orf48-202ENST00000375635 EFCAB5A4FU69 1503 aa21.86■■□□□ 1.09
C6orf48-202ENST00000375635 RANGAP1P46060 587 aaPredicted RBP21.86■■□□□ 1.09
C6orf48-202ENST00000375635 KDM5BQ9UGL1 1544 aa21.85■■□□□ 1.09
C6orf48-202ENST00000375635 FHOD3Q2V2M9 1422 aa21.84■■□□□ 1.09
C6orf48-202ENST00000375635 NPM1P06748 294 aaKnown RBP eCLIP21.83■■□□□ 1.09
C6orf48-202ENST00000375635 TRHP20396 242 aaPredicted RBP21.83■■□□□ 1.09
C6orf48-202ENST00000375635 ARHGAP35Q9NRY4 1499 aa21.82■■□□□ 1.08
C6orf48-202ENST00000375635 KIF13AQ9H1H9 1805 aa21.78■■□□□ 1.08
C6orf48-202ENST00000375635 ZCCHC11Q5TAX3 1644 aaKnown RBP21.78■■□□□ 1.08
C6orf48-202ENST00000375635 ABCC10Q5T3U5 1492 aa21.77■■□□□ 1.07
C6orf48-202ENST00000375635 ASXL2Q76L83 1435 aa21.74■■□□□ 1.07
C6orf48-202ENST00000375635 RAPGEF6Q8TEU7 1601 aa21.74■■□□□ 1.07
C6orf48-202ENST00000375635 DIP2BQ9P265 1576 aa21.74■■□□□ 1.07
C6orf48-202ENST00000375635 ATP10BO94823 1461 aa21.71■■□□□ 1.07
C6orf48-202ENST00000375635 NUP153P49790 1475 aaKnown RBP21.71■■□□□ 1.07
C6orf48-202ENST00000375635 LOC105371045A0A1W2PR82 267 aa21.67■■□□□ 1.06
C6orf48-202ENST00000375635 FAM69CQ0P6D2 419 aa21.67■■□□□ 1.06
C6orf48-202ENST00000375635 CLIP1P30622 1438 aa21.64■■□□□ 1.06
C6orf48-202ENST00000375635 GLI2P10070 1586 aa21.64■■□□□ 1.05
C6orf48-202ENST00000375635 WDR7Q9Y4E6 1490 aa21.64■■□□□ 1.05
C6orf48-202ENST00000375635 FMN1Q68DA7 1419 aa21.63■■□□□ 1.05
C6orf48-202ENST00000375635 ARID3CA6NKF2 412 aa21.63■■□□□ 1.05
C6orf48-202ENST00000375635 EPRSP07814 1512 aaKnown RBP21.63■■□□□ 1.05
C6orf48-202ENST00000375635 CEP162Q5TB80 1403 aa21.57■■□□□ 1.04
C6orf48-202ENST00000375635 MAP3K4Q9Y6R4 1608 aa21.54■■□□□ 1.04
C6orf48-202ENST00000375635 CDK13Q14004 1512 aaKnown RBP21.54■■□□□ 1.04
C6orf48-202ENST00000375635 PPRC1Q5VV67 1664 aaKnown RBP21.53■■□□□ 1.04
C6orf48-202ENST00000375635 LRRIQ1Q96JM4 1722 aa21.53■■□□□ 1.04
C6orf48-202ENST00000375635 HECW1Q76N89 1606 aa21.53■■□□□ 1.04
C6orf48-202ENST00000375635 CASKIN1Q8WXD9 1431 aa21.52■■□□□ 1.04
C6orf48-202ENST00000375635 PCF11O94913 1555 aaKnown RBP21.52■■□□□ 1.04
C6orf48-202ENST00000375635 TSPOAP1O95153 1857 aa21.52■■□□□ 1.03
C6orf48-202ENST00000375635 KCNH8Q96L42 1107 aa21.5■■□□□ 1.03
C6orf48-202ENST00000375635 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.48■■□□□ 1.03
C6orf48-202ENST00000375635 HNRNPUL2Q1KMD3 747 aaKnown RBP21.48■■□□□ 1.03
C6orf48-202ENST00000375635 CFAP43Q8NDM7 1665 aa21.46■■□□□ 1.03
C6orf48-202ENST00000375635 FYCO1Q9BQS8 1478 aa21.45■■□□□ 1.03
C6orf48-202ENST00000375635 ABCA9Q8IUA7 1624 aa21.44■■□□□ 1.02
C6orf48-202ENST00000375635 ATP1B4Q9UN42 357 aaPredicted RBP21.44■■□□□ 1.02
C6orf48-202ENST00000375635 PLEKHD1A6NEE1 506 aa21.43■■□□□ 1.02
C6orf48-202ENST00000375635 CD109Q6YHK3 1445 aa21.42■■□□□ 1.02
C6orf48-202ENST00000375635 MAGI3Q5TCQ9 1506 aa21.41■■□□□ 1.02
C6orf48-202ENST00000375635 CCDC18Q5T9S5 1454 aa21.39■■□□□ 1.01
C6orf48-202ENST00000375635 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.36■■□□□ 1.01
C6orf48-202ENST00000375635 TEX14Q8IWB6 1497 aa21.36■■□□□ 1.01
C6orf48-202ENST00000375635 COL17A1Q9UMD9 1497 aaPredicted RBP21.35■■□□□ 1.01
C6orf48-202ENST00000375635 TROQ12816 1431 aaPredicted RBP21.35■■□□□ 1.01
C6orf48-202ENST00000375635 TTC37Q6PGP7 1564 aa21.34■■□□□ 1.01
C6orf48-202ENST00000375635 KDM6BO15054 1643 aa21.33■■□□□ 1.01
C6orf48-202ENST00000375635 KIF14Q15058 1648 aa21.33■■□□□ 1
C6orf48-202ENST00000375635 CDK11AQ9UQ88 783 aaPredicted RBP21.32■■□□□ 1
C6orf48-202ENST00000375635 VPS8Q8N3P4 1428 aa21.3■■□□□ 1
C6orf48-202ENST00000375635 ARAP3Q8WWN8 1544 aa21.24■□□□□ 0.99
C6orf48-202ENST00000375635 PLCH2O75038 1416 aa21.23■□□□□ 0.99
C6orf48-202ENST00000375635 NEO1Q92859 1461 aa21.23■□□□□ 0.99
C6orf48-202ENST00000375635 PHLDB1Q86UU1 1377 aa21.21■□□□□ 0.99
C6orf48-202ENST00000375635 FANCAO15360 1455 aa21.2■□□□□ 0.98
C6orf48-202ENST00000375635 MYO5CQ9NQX4 1742 aa21.19■□□□□ 0.98
C6orf48-202ENST00000375635 TIAM1Q13009 1591 aa21.19■□□□□ 0.98
C6orf48-202ENST00000375635 AKNAQ7Z591 1439 aa21.16■□□□□ 0.98
C6orf48-202ENST00000375635 CDC42BPBQ9Y5S2 1711 aa21.15■□□□□ 0.98
C6orf48-202ENST00000375635 CFAP74Q9C0B2 1584 aa21.14■□□□□ 0.98
C6orf48-202ENST00000375635 MAP3K1Q13233 1512 aa21.14■□□□□ 0.98
C6orf48-202ENST00000375635 EHBP1L1Q8N3D4 1523 aa21.14■□□□□ 0.98
C6orf48-202ENST00000375635 MTUS2Q5JR59 1369 aa21.14■□□□□ 0.98
C6orf48-202ENST00000375635 CDC42BPAQ5VT25 1732 aa21.14■□□□□ 0.97
C6orf48-202ENST00000375635 PREX2Q70Z35 1606 aa21.14■□□□□ 0.97
C6orf48-202ENST00000375635 FRMPD1Q5SYB0 1578 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms