RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 ADAMTS12P58397 1594 aa18.57■□□□□ 0.56
UBR4-203ENST00000375225 FHAD1B1AJZ9 1412 aa18.55■□□□□ 0.56
UBR4-203ENST00000375225 CTTNBP2Q8WZ74 1663 aa18.55■□□□□ 0.56
UBR4-203ENST00000375225 SNAPC4Q5SXM2 1469 aa18.5■□□□□ 0.55
UBR4-203ENST00000375225 MAGI1Q96QZ7 1491 aaPredicted RBP18.5■□□□□ 0.55
UBR4-203ENST00000375225 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.46■□□□□ 0.55
UBR4-203ENST00000375225 RANGAP1P46060 587 aaPredicted RBP18.43■□□□□ 0.54
UBR4-203ENST00000375225 TTBK1Q5TCY1 1321 aaPredicted RBP18.42■□□□□ 0.54
UBR4-203ENST00000375225 SYNJ2O15056 1496 aa18.41■□□□□ 0.54
UBR4-203ENST00000375225 GRIN2AQ12879 1464 aa18.39■□□□□ 0.53
UBR4-203ENST00000375225 EFCAB5A4FU69 1503 aa18.38■□□□□ 0.53
UBR4-203ENST00000375225 ARHGAP35Q9NRY4 1499 aa18.37■□□□□ 0.53
UBR4-203ENST00000375225 AEBP2Q6ZN18 517 aaPredicted RBP18.36■□□□□ 0.53
UBR4-203ENST00000375225 ARAP1Q96P48 1450 aa18.36■□□□□ 0.53
UBR4-203ENST00000375225 IQGAP2Q13576 1575 aa18.35■□□□□ 0.53
UBR4-203ENST00000375225 CHMP7Q8WUX9 453 aaPredicted RBP18.33■□□□□ 0.53
UBR4-203ENST00000375225 SAMD9Q5K651 1589 aa18.29■□□□□ 0.52
UBR4-203ENST00000375225 KIAA0586Q9BVV6 1533 aa18.29■□□□□ 0.52
UBR4-203ENST00000375225 FBLN2P98095 1184 aa18.28■□□□□ 0.52
UBR4-203ENST00000375225 CHD1O14646 1710 aa18.27■□□□□ 0.52
UBR4-203ENST00000375225 CEP170Q5SW79 1584 aa18.27■□□□□ 0.51
UBR4-203ENST00000375225 NUP160Q12769 1436 aa18.25■□□□□ 0.51
UBR4-203ENST00000375225 UGGT2Q9NYU1 1516 aa18.23■□□□□ 0.51
UBR4-203ENST00000375225 MAP3K1Q13233 1512 aa18.22■□□□□ 0.51
UBR4-203ENST00000375225 FHOD3Q2V2M9 1422 aa18.22■□□□□ 0.51
UBR4-203ENST00000375225 HNRNPUL2Q1KMD3 747 aaKnown RBP18.21■□□□□ 0.51
UBR4-203ENST00000375225 FMN1Q68DA7 1419 aa18.19■□□□□ 0.5
UBR4-203ENST00000375225 CLSPNQ9HAW4 1339 aa18.18■□□□□ 0.5
UBR4-203ENST00000375225 P3H3Q8IVL6 736 aa18.18■□□□□ 0.5
UBR4-203ENST00000375225 PCF11O94913 1555 aaKnown RBP18.16■□□□□ 0.5
UBR4-203ENST00000375225 KIAA0556O60303 1618 aa18.16■□□□□ 0.5
UBR4-203ENST00000375225 RRBP1Q9P2E9 1410 aaKnown RBP18.15■□□□□ 0.5
UBR4-203ENST00000375225 FYCO1Q9BQS8 1478 aa18.14■□□□□ 0.49
UBR4-203ENST00000375225 DISP1Q96F81 1524 aa18.11■□□□□ 0.49
UBR4-203ENST00000375225 CASKIN1Q8WXD9 1431 aa18.11■□□□□ 0.49
UBR4-203ENST00000375225 DIEXFQ68CQ4 756 aaKnown RBP18.1■□□□□ 0.49
UBR4-203ENST00000375225 CARMIL2Q6F5E8 1435 aa18.1■□□□□ 0.49
UBR4-203ENST00000375225 CFAP43Q8NDM7 1665 aa18.09■□□□□ 0.49
UBR4-203ENST00000375225 TIAM1Q13009 1591 aa18.09■□□□□ 0.49
UBR4-203ENST00000375225 ZNF316A6NFI3 1004 aaPredicted RBP18.08■□□□□ 0.49
UBR4-203ENST00000375225 CCNB3Q8WWL7 1395 aa18.06■□□□□ 0.48
UBR4-203ENST00000375225 JPH4Q96JJ6 628 aa18.06■□□□□ 0.48
UBR4-203ENST00000375225 HECW1Q76N89 1606 aa18.05■□□□□ 0.48
UBR4-203ENST00000375225 KANK4Q5T7N3 995 aaPredicted RBP18.05■□□□□ 0.48
UBR4-203ENST00000375225 SHROOM2Q13796 1616 aa18.05■□□□□ 0.48
UBR4-203ENST00000375225 CLASP1Q7Z460 1538 aa18.02■□□□□ 0.48
UBR4-203ENST00000375225 ATP1B4Q9UN42 357 aaPredicted RBP18.02■□□□□ 0.47
UBR4-203ENST00000375225 CCDC18Q5T9S5 1454 aa18■□□□□ 0.47
UBR4-203ENST00000375225 LRRC9Q6ZRR7 1453 aa17.99■□□□□ 0.47
UBR4-203ENST00000375225 PRG4Q92954 1404 aaPredicted RBP17.98■□□□□ 0.47
UBR4-203ENST00000375225 LRRIQ1Q96JM4 1722 aa17.98■□□□□ 0.47
UBR4-203ENST00000375225 RAPGEF6Q8TEU7 1601 aa17.98■□□□□ 0.47
UBR4-203ENST00000375225 CENPBP07199 599 aaPredicted RBP17.96■□□□□ 0.47
UBR4-203ENST00000375225 DHX57Q6P158 1386 aaKnown RBP17.95■□□□□ 0.46
UBR4-203ENST00000375225 EPRSP07814 1512 aaKnown RBP17.91■□□□□ 0.46
UBR4-203ENST00000375225 EHBP1L1Q8N3D4 1523 aa17.89■□□□□ 0.46
UBR4-203ENST00000375225 MTUS2Q5JR59 1369 aa17.88■□□□□ 0.45
UBR4-203ENST00000375225 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.88■□□□□ 0.45
UBR4-203ENST00000375225 ABCA8O94911 1581 aa17.87■□□□□ 0.45
UBR4-203ENST00000375225 NUP153P49790 1475 aaKnown RBP17.87■□□□□ 0.45
UBR4-203ENST00000375225 PTPRGP23470 1445 aa17.87■□□□□ 0.45
UBR4-203ENST00000375225 PLB1Q6P1J6 1458 aa17.87■□□□□ 0.45
UBR4-203ENST00000375225 SUPT6HQ7KZ85 1726 aaKnown RBP17.86■□□□□ 0.45
UBR4-203ENST00000375225 OSCARQ8IYS5 282 aa17.86■□□□□ 0.45
UBR4-203ENST00000375225 CDK13Q14004 1512 aaKnown RBP17.85■□□□□ 0.45
UBR4-203ENST00000375225 ERCC6L2Q5T890 1561 aa17.84■□□□□ 0.45
UBR4-203ENST00000375225 SETD5Q9C0A6 1442 aa17.83■□□□□ 0.44
UBR4-203ENST00000375225 ACIN1Q9UKV3 1341 aaKnown RBP17.81■□□□□ 0.44
UBR4-203ENST00000375225 PHLDB1Q86UU1 1377 aa17.8■□□□□ 0.44
UBR4-203ENST00000375225 CDK11AQ9UQ88 783 aaPredicted RBP17.8■□□□□ 0.44
UBR4-203ENST00000375225 UACAQ9BZF9 1416 aa17.79■□□□□ 0.44
UBR4-203ENST00000375225 RAB3GAP2Q9H2M9 1393 aa17.78■□□□□ 0.44
UBR4-203ENST00000375225 MAGI3Q5TCQ9 1506 aa17.78■□□□□ 0.44
UBR4-203ENST00000375225 ITGAEP38570 1179 aa17.77■□□□□ 0.43
UBR4-203ENST00000375225 FAM50AQ14320 339 aaKnown RBP17.77■□□□□ 0.43
UBR4-203ENST00000375225 NCOA2Q15596 1464 aa17.76■□□□□ 0.43
UBR4-203ENST00000375225 ABCC2Q92887 1545 aa17.76■□□□□ 0.43
UBR4-203ENST00000375225 ARID3CA6NKF2 412 aa17.76■□□□□ 0.43
UBR4-203ENST00000375225 ARHGEF11O15085 1522 aa17.73■□□□□ 0.43
UBR4-203ENST00000375225 ADCY10Q96PN6 1610 aa17.72■□□□□ 0.43
UBR4-203ENST00000375225 TROQ12816 1431 aaPredicted RBP17.71■□□□□ 0.43
UBR4-203ENST00000375225 UHRF1BP1LA0JNW5 1464 aa17.71■□□□□ 0.43
UBR4-203ENST00000375225 ATP10BO94823 1461 aa17.71■□□□□ 0.43
UBR4-203ENST00000375225 TIMELESSQ9UNS1 1208 aa17.71■□□□□ 0.43
UBR4-203ENST00000375225 SCAF1Q9H7N4 1312 aaKnown RBP17.71■□□□□ 0.43
UBR4-203ENST00000375225 MYOM3Q5VTT5 1437 aa17.7■□□□□ 0.42
UBR4-203ENST00000375225 FGD6Q6ZV73 1430 aa17.7■□□□□ 0.42
UBR4-203ENST00000375225 KIF14Q15058 1648 aa17.67■□□□□ 0.42
UBR4-203ENST00000375225 PLEKHD1A6NEE1 506 aa17.67■□□□□ 0.42
UBR4-203ENST00000375225 ITSN2Q9NZM3 1697 aa17.66■□□□□ 0.42
UBR4-203ENST00000375225 MAPKBP1O60336 1514 aa17.65■□□□□ 0.42
UBR4-203ENST00000375225 ZCCHC11Q5TAX3 1644 aaKnown RBP17.65■□□□□ 0.42
UBR4-203ENST00000375225 NEUROD1Q13562 356 aa17.64■□□□□ 0.41
UBR4-203ENST00000375225 PTPN23Q9H3S7 1636 aa17.63■□□□□ 0.41
UBR4-203ENST00000375225 KDM5BQ9UGL1 1544 aa17.62■□□□□ 0.41
UBR4-203ENST00000375225 MIA2Q96PC5 1412 aa17.62■□□□□ 0.41
UBR4-203ENST00000375225 MIER1Q8N108 512 aa17.61■□□□□ 0.41
UBR4-203ENST00000375225 PELP1Q8IZL8 1130 aaKnown RBP17.6■□□□□ 0.41
UBR4-203ENST00000375225 TCOF1Q13428 1488 aaKnown RBP17.58■□□□□ 0.41
UBR4-203ENST00000375225 HFM1A2PYH4 1435 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms