RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 CEP170Q5SW79 1584 aa27.77■■■□□ 2.04
HLA-DMA-201ENST00000374843 CHMP7Q8WUX9 453 aaPredicted RBP27.77■■■□□ 2.04
HLA-DMA-201ENST00000374843 IQGAP2Q13576 1575 aa27.72■■■□□ 2.03
HLA-DMA-201ENST00000374843 KIAA0586Q9BVV6 1533 aa27.72■■■□□ 2.03
HLA-DMA-201ENST00000374843 CLIP1P30622 1438 aa27.68■■■□□ 2.02
HLA-DMA-201ENST00000374843 EFCAB5A4FU69 1503 aa27.64■■■□□ 2.02
HLA-DMA-201ENST00000374843 FBLN2P98095 1184 aa27.64■■■□□ 2.02
HLA-DMA-201ENST00000374843 UGGT2Q9NYU1 1516 aa27.62■■■□□ 2.01
HLA-DMA-201ENST00000374843 SAMD9Q5K651 1589 aa27.6■■■□□ 2.01
HLA-DMA-201ENST00000374843 ARHGAP35Q9NRY4 1499 aa27.6■■■□□ 2.01
HLA-DMA-201ENST00000374843 CLASP1Q7Z460 1538 aa27.58■■■□□ 2.01
HLA-DMA-201ENST00000374843 ARAP1Q96P48 1450 aa27.53■■■□□ 2
HLA-DMA-201ENST00000374843 SHROOM2Q13796 1616 aa27.52■■■□□ 2
HLA-DMA-201ENST00000374843 DISP1Q96F81 1524 aa27.46■■□□□ 1.99
HLA-DMA-201ENST00000374843 KIAA0556O60303 1618 aa27.45■■□□□ 1.99
HLA-DMA-201ENST00000374843 VPS8Q8N3P4 1428 aa27.42■■□□□ 1.98
HLA-DMA-201ENST00000374843 RANGAP1P46060 587 aaPredicted RBP27.41■■□□□ 1.98
HLA-DMA-201ENST00000374843 FHOD3Q2V2M9 1422 aa27.39■■□□□ 1.97
HLA-DMA-201ENST00000374843 JPH4Q96JJ6 628 aa27.38■■□□□ 1.97
HLA-DMA-201ENST00000374843 CARMIL2Q6F5E8 1435 aa27.34■■□□□ 1.97
HLA-DMA-201ENST00000374843 OSCARQ8IYS5 282 aa27.32■■□□□ 1.96
HLA-DMA-201ENST00000374843 FMN1Q68DA7 1419 aa27.31■■□□□ 1.96
HLA-DMA-201ENST00000374843 PRG4Q92954 1404 aaPredicted RBP27.31■■□□□ 1.96
HLA-DMA-201ENST00000374843 PCF11O94913 1555 aaKnown RBP27.25■■□□□ 1.95
HLA-DMA-201ENST00000374843 P3H3Q8IVL6 736 aa27.24■■□□□ 1.95
HLA-DMA-201ENST00000374843 FYCO1Q9BQS8 1478 aa27.23■■□□□ 1.95
HLA-DMA-201ENST00000374843 CASKIN1Q8WXD9 1431 aa27.22■■□□□ 1.95
HLA-DMA-201ENST00000374843 ERCC6L2Q5T890 1561 aa27.22■■□□□ 1.95
HLA-DMA-201ENST00000374843 HECW1Q76N89 1606 aa27.12■■□□□ 1.93
HLA-DMA-201ENST00000374843 MAP3K1Q13233 1512 aa27.11■■□□□ 1.93
HLA-DMA-201ENST00000374843 RAPGEF6Q8TEU7 1601 aa27.11■■□□□ 1.93
HLA-DMA-201ENST00000374843 ABCA8O94911 1581 aa27.1■■□□□ 1.93
HLA-DMA-201ENST00000374843 PTPRGP23470 1445 aa27.08■■□□□ 1.93
HLA-DMA-201ENST00000374843 CFAP43Q8NDM7 1665 aa27.08■■□□□ 1.92
HLA-DMA-201ENST00000374843 TIAM1Q13009 1591 aa27.05■■□□□ 1.92
HLA-DMA-201ENST00000374843 PLB1Q6P1J6 1458 aa27.04■■□□□ 1.92
HLA-DMA-201ENST00000374843 LRRIQ1Q96JM4 1722 aa27.02■■□□□ 1.92
HLA-DMA-201ENST00000374843 NUP153P49790 1475 aaKnown RBP27.02■■□□□ 1.92
HLA-DMA-201ENST00000374843 CCDC18Q5T9S5 1454 aa27.02■■□□□ 1.92
HLA-DMA-201ENST00000374843 ARHGEF11O15085 1522 aa27■■□□□ 1.91
HLA-DMA-201ENST00000374843 EPRSP07814 1512 aaKnown RBP26.97■■□□□ 1.91
HLA-DMA-201ENST00000374843 ABCC2Q92887 1545 aa26.97■■□□□ 1.91
HLA-DMA-201ENST00000374843 UACAQ9BZF9 1416 aa26.97■■□□□ 1.91
HLA-DMA-201ENST00000374843 UHRF1BP1LA0JNW5 1464 aa26.96■■□□□ 1.91
HLA-DMA-201ENST00000374843 APLP2Q06481 763 aa26.92■■□□□ 1.9
HLA-DMA-201ENST00000374843 RIMBP3CA6NJZ7 1639 aa26.9■■□□□ 1.9
HLA-DMA-201ENST00000374843 RIMBP3BA6NNM3 1639 aa26.9■■□□□ 1.9
HLA-DMA-201ENST00000374843 RIMBP3Q9UFD9 1639 aa26.9■■□□□ 1.9
HLA-DMA-201ENST00000374843 CDK13Q14004 1512 aaKnown RBP26.9■■□□□ 1.9
HLA-DMA-201ENST00000374843 TTBK1Q5TCY1 1321 aaPredicted RBP26.9■■□□□ 1.9
HLA-DMA-201ENST00000374843 LRRC9Q6ZRR7 1453 aa26.88■■□□□ 1.89
HLA-DMA-201ENST00000374843 ADCY10Q96PN6 1610 aa26.85■■□□□ 1.89
HLA-DMA-201ENST00000374843 EHBP1L1Q8N3D4 1523 aa26.84■■□□□ 1.89
HLA-DMA-201ENST00000374843 ATP1B4Q9UN42 357 aaPredicted RBP26.83■■□□□ 1.89
HLA-DMA-201ENST00000374843 ATP10BO94823 1461 aa26.82■■□□□ 1.88
HLA-DMA-201ENST00000374843 MAGI3Q5TCQ9 1506 aa26.81■■□□□ 1.88
HLA-DMA-201ENST00000374843 KDM5BQ9UGL1 1544 aa26.81■■□□□ 1.88
HLA-DMA-201ENST00000374843 KANK4Q5T7N3 995 aaPredicted RBP26.79■■□□□ 1.88
HLA-DMA-201ENST00000374843 ZCCHC11Q5TAX3 1644 aaKnown RBP26.76■■□□□ 1.87
HLA-DMA-201ENST00000374843 MTUS2Q5JR59 1369 aa26.73■■□□□ 1.87
HLA-DMA-201ENST00000374843 TROQ12816 1431 aaPredicted RBP26.71■■□□□ 1.87
HLA-DMA-201ENST00000374843 PPARGC1BQ86YN6 1023 aaKnown RBP26.7■■□□□ 1.86
HLA-DMA-201ENST00000374843 SUPT6HQ7KZ85 1726 aaKnown RBP26.69■■□□□ 1.86
HLA-DMA-201ENST00000374843 ARID3CA6NKF2 412 aa26.68■■□□□ 1.86
HLA-DMA-201ENST00000374843 CDK11AQ9UQ88 783 aaPredicted RBP26.68■■□□□ 1.86
HLA-DMA-201ENST00000374843 NCOA2Q15596 1464 aa26.63■■□□□ 1.85
HLA-DMA-201ENST00000374843 KIF14Q15058 1648 aa26.61■■□□□ 1.85
HLA-DMA-201ENST00000374843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.59■■□□□ 1.85
HLA-DMA-201ENST00000374843 HNRNPUL2Q1KMD3 747 aaKnown RBP26.59■■□□□ 1.85
HLA-DMA-201ENST00000374843 PHLDB1Q86UU1 1377 aa26.57■■□□□ 1.84
HLA-DMA-201ENST00000374843 PLEKHD1A6NEE1 506 aa26.56■■□□□ 1.84
HLA-DMA-201ENST00000374843 RRBP1Q9P2E9 1410 aaKnown RBP26.55■■□□□ 1.84
HLA-DMA-201ENST00000374843 WDR7Q9Y4E6 1490 aa26.55■■□□□ 1.84
HLA-DMA-201ENST00000374843 CYB5RLQ6IPT4 315 aa26.54■■□□□ 1.84
HLA-DMA-201ENST00000374843 ABCC10Q5T3U5 1492 aa26.54■■□□□ 1.84
HLA-DMA-201ENST00000374843 MAPKBP1O60336 1514 aa26.53■■□□□ 1.84
HLA-DMA-201ENST00000374843 MYOM3Q5VTT5 1437 aa26.51■■□□□ 1.83
HLA-DMA-201ENST00000374843 TRIM26Q12899 539 aaPredicted RBP26.51■■□□□ 1.83
HLA-DMA-201ENST00000374843 ASXL2Q76L83 1435 aa26.5■■□□□ 1.83
HLA-DMA-201ENST00000374843 ITSN2Q9NZM3 1697 aa26.47■■□□□ 1.83
HLA-DMA-201ENST00000374843 NPM1P06748 294 aaKnown RBP eCLIP26.46■■□□□ 1.83
HLA-DMA-201ENST00000374843 FGD6Q6ZV73 1430 aa26.46■■□□□ 1.83
HLA-DMA-201ENST00000374843 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.44■■□□□ 1.82
HLA-DMA-201ENST00000374843 TTC37Q6PGP7 1564 aa26.44■■□□□ 1.82
HLA-DMA-201ENST00000374843 MIA2Q96PC5 1412 aa26.43■■□□□ 1.82
HLA-DMA-201ENST00000374843 CCNB3Q8WWL7 1395 aa26.43■■□□□ 1.82
HLA-DMA-201ENST00000374843 DNAJC5Q9H3Z4 198 aa26.42■■□□□ 1.82
HLA-DMA-201ENST00000374843 GPATCH8Q9UKJ3 1502 aaKnown RBP26.42■■□□□ 1.82
HLA-DMA-201ENST00000374843 CDC42BPAQ5VT25 1732 aa26.41■■□□□ 1.82
HLA-DMA-201ENST00000374843 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.4■■□□□ 1.82
HLA-DMA-201ENST00000374843 PREX2Q70Z35 1606 aa26.39■■□□□ 1.82
HLA-DMA-201ENST00000374843 ABCA9Q8IUA7 1624 aa26.39■■□□□ 1.82
HLA-DMA-201ENST00000374843 TCOF1Q13428 1488 aaKnown RBP26.39■■□□□ 1.82
HLA-DMA-201ENST00000374843 PTPN23Q9H3S7 1636 aa26.36■■□□□ 1.81
HLA-DMA-201ENST00000374843 ARAP3Q8WWN8 1544 aa26.35■■□□□ 1.81
HLA-DMA-201ENST00000374843 MYO5CQ9NQX4 1742 aa26.34■■□□□ 1.81
HLA-DMA-201ENST00000374843 GLI2P10070 1586 aa26.3■■□□□ 1.8
HLA-DMA-201ENST00000374843 CDC42BPBQ9Y5S2 1711 aa26.3■■□□□ 1.8
HLA-DMA-201ENST00000374843 PLCH2O75038 1416 aa26.28■■□□□ 1.8
HLA-DMA-201ENST00000374843 DIP2BQ9P265 1576 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms