RNA–Protein interactions for RNA: ENST00000374767.4

NIPSNAP3A-201, Transcript of nipsnap homolog 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP3A, Length 1,633 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3A-201ENST00000374767 ZNF608Q9ULD9 1512 aaPredicted RBP21.48■■□□□ 1.03
NIPSNAP3A-201ENST00000374767 PBRM1Q86U86 1689 aa21.46■■□□□ 1.03
NIPSNAP3A-201ENST00000374767 ADAMTS12P58397 1594 aa21.44■■□□□ 1.02
NIPSNAP3A-201ENST00000374767 CTTNBP2Q8WZ74 1663 aa21.43■■□□□ 1.02
NIPSNAP3A-201ENST00000374767 MAP3K1Q13233 1512 aa21.42■■□□□ 1.02
NIPSNAP3A-201ENST00000374767 EIF4G3O43432 1585 aaKnown RBP21.36■■□□□ 1.01
NIPSNAP3A-201ENST00000374767 MAGI1Q96QZ7 1491 aaPredicted RBP21.35■■□□□ 1.01
NIPSNAP3A-201ENST00000374767 SAMD9Q5K651 1589 aa21.34■■□□□ 1.01
NIPSNAP3A-201ENST00000374767 SNAPC4Q5SXM2 1469 aa21.32■■□□□ 1
NIPSNAP3A-201ENST00000374767 FMN1Q68DA7 1419 aa21.32■■□□□ 1
NIPSNAP3A-201ENST00000374767 KANK4Q5T7N3 995 aaPredicted RBP21.31■■□□□ 1
NIPSNAP3A-201ENST00000374767 FHOD3Q2V2M9 1422 aa21.31■■□□□ 1
NIPSNAP3A-201ENST00000374767 TTBK1Q5TCY1 1321 aaPredicted RBP21.31■■□□□ 1
NIPSNAP3A-201ENST00000374767 CASKIN1Q8WXD9 1431 aa21.3■■□□□ 1
NIPSNAP3A-201ENST00000374767 FYCO1Q9BQS8 1478 aa21.28■■□□□ 1
NIPSNAP3A-201ENST00000374767 GRIN2AQ12879 1464 aa21.27■■□□□ 1
NIPSNAP3A-201ENST00000374767 KIAA0586Q9BVV6 1533 aa21.27■■□□□ 1
NIPSNAP3A-201ENST00000374767 P3H3Q8IVL6 736 aa21.26■□□□□ 0.99
NIPSNAP3A-201ENST00000374767 SYNJ2O15056 1496 aa21.26■□□□□ 0.99
NIPSNAP3A-201ENST00000374767 IQGAP2Q13576 1575 aa21.26■□□□□ 0.99
NIPSNAP3A-201ENST00000374767 ZEB1P37275 1124 aaPredicted RBP21.25■□□□□ 0.99
NIPSNAP3A-201ENST00000374767 TIAM1Q13009 1591 aa21.25■□□□□ 0.99
NIPSNAP3A-201ENST00000374767 UGGT2Q9NYU1 1516 aa21.23■□□□□ 0.99
NIPSNAP3A-201ENST00000374767 PCF11O94913 1555 aaKnown RBP21.21■□□□□ 0.99
NIPSNAP3A-201ENST00000374767 LRRC9Q6ZRR7 1453 aa21.19■□□□□ 0.98
NIPSNAP3A-201ENST00000374767 RRBP1Q9P2E9 1410 aaKnown RBP21.19■□□□□ 0.98
NIPSNAP3A-201ENST00000374767 CHMP7Q8WUX9 453 aaPredicted RBP21.18■□□□□ 0.98
NIPSNAP3A-201ENST00000374767 NUP160Q12769 1436 aa21.16■□□□□ 0.98
NIPSNAP3A-201ENST00000374767 CFAP43Q8NDM7 1665 aa21.14■□□□□ 0.97
NIPSNAP3A-201ENST00000374767 DISP1Q96F81 1524 aa21.08■□□□□ 0.97
NIPSNAP3A-201ENST00000374767 CEP170Q5SW79 1584 aa21.07■□□□□ 0.96
NIPSNAP3A-201ENST00000374767 CCNB3Q8WWL7 1395 aa21.07■□□□□ 0.96
NIPSNAP3A-201ENST00000374767 ATP1B4Q9UN42 357 aaPredicted RBP21.04■□□□□ 0.96
NIPSNAP3A-201ENST00000374767 CCDC18Q5T9S5 1454 aa21.03■□□□□ 0.96
NIPSNAP3A-201ENST00000374767 KIAA0556O60303 1618 aa21.03■□□□□ 0.96
NIPSNAP3A-201ENST00000374767 FBLN2P98095 1184 aa21.02■□□□□ 0.96
NIPSNAP3A-201ENST00000374767 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.01■□□□□ 0.95
NIPSNAP3A-201ENST00000374767 HNRNPUL2Q1KMD3 747 aaKnown RBP21.01■□□□□ 0.95
NIPSNAP3A-201ENST00000374767 JPH4Q96JJ6 628 aa21.01■□□□□ 0.95
NIPSNAP3A-201ENST00000374767 PHLDB1Q86UU1 1377 aa21■□□□□ 0.95
NIPSNAP3A-201ENST00000374767 CCER1Q8TC90 406 aaPredicted RBP21■□□□□ 0.95
NIPSNAP3A-201ENST00000374767 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.99■□□□□ 0.95
NIPSNAP3A-201ENST00000374767 HECW1Q76N89 1606 aa20.97■□□□□ 0.95
NIPSNAP3A-201ENST00000374767 CARMIL2Q6F5E8 1435 aa20.97■□□□□ 0.95
NIPSNAP3A-201ENST00000374767 MTUS2Q5JR59 1369 aa20.96■□□□□ 0.95
NIPSNAP3A-201ENST00000374767 EPRSP07814 1512 aaKnown RBP20.95■□□□□ 0.94
NIPSNAP3A-201ENST00000374767 EHBP1L1Q8N3D4 1523 aa20.92■□□□□ 0.94
NIPSNAP3A-201ENST00000374767 LRRIQ1Q96JM4 1722 aa20.91■□□□□ 0.94
NIPSNAP3A-201ENST00000374767 ARHGEF11O15085 1522 aa20.89■□□□□ 0.93
NIPSNAP3A-201ENST00000374767 NUP153P49790 1475 aaKnown RBP20.86■□□□□ 0.93
NIPSNAP3A-201ENST00000374767 NCOA2Q15596 1464 aa20.86■□□□□ 0.93
NIPSNAP3A-201ENST00000374767 FGD6Q6ZV73 1430 aa20.85■□□□□ 0.93
NIPSNAP3A-201ENST00000374767 MAGI3Q5TCQ9 1506 aa20.84■□□□□ 0.93
NIPSNAP3A-201ENST00000374767 RAPGEF6Q8TEU7 1601 aa20.84■□□□□ 0.93
NIPSNAP3A-201ENST00000374767 MYOM3Q5VTT5 1437 aa20.83■□□□□ 0.92
NIPSNAP3A-201ENST00000374767 SUPT6HQ7KZ85 1726 aaKnown RBP20.82■□□□□ 0.92
NIPSNAP3A-201ENST00000374767 CLSPNQ9HAW4 1339 aa20.82■□□□□ 0.92
NIPSNAP3A-201ENST00000374767 CDK11AQ9UQ88 783 aaPredicted RBP20.81■□□□□ 0.92
NIPSNAP3A-201ENST00000374767 CDK13Q14004 1512 aaKnown RBP20.8■□□□□ 0.92
NIPSNAP3A-201ENST00000374767 PRG4Q92954 1404 aaPredicted RBP20.79■□□□□ 0.92
NIPSNAP3A-201ENST00000374767 CHD1O14646 1710 aa20.78■□□□□ 0.92
NIPSNAP3A-201ENST00000374767 FAM50AQ14320 339 aaKnown RBP20.78■□□□□ 0.92
NIPSNAP3A-201ENST00000374767 PLB1Q6P1J6 1458 aa20.77■□□□□ 0.92
NIPSNAP3A-201ENST00000374767 SHROOM2Q13796 1616 aa20.77■□□□□ 0.92
NIPSNAP3A-201ENST00000374767 ABCA8O94911 1581 aa20.76■□□□□ 0.91
NIPSNAP3A-201ENST00000374767 MIA2Q96PC5 1412 aa20.75■□□□□ 0.91
NIPSNAP3A-201ENST00000374767 PTPRGP23470 1445 aa20.73■□□□□ 0.91
NIPSNAP3A-201ENST00000374767 TCOF1Q13428 1488 aaKnown RBP20.73■□□□□ 0.91
NIPSNAP3A-201ENST00000374767 SETD5Q9C0A6 1442 aa20.72■□□□□ 0.91
NIPSNAP3A-201ENST00000374767 DHX57Q6P158 1386 aaKnown RBP20.72■□□□□ 0.91
NIPSNAP3A-201ENST00000374767 TROQ12816 1431 aaPredicted RBP20.71■□□□□ 0.91
NIPSNAP3A-201ENST00000374767 ITGAEP38570 1179 aa20.7■□□□□ 0.9
NIPSNAP3A-201ENST00000374767 CLASP1Q7Z460 1538 aa20.7■□□□□ 0.9
NIPSNAP3A-201ENST00000374767 RAB3GAP2Q9H2M9 1393 aa20.68■□□□□ 0.9
NIPSNAP3A-201ENST00000374767 ATP10BO94823 1461 aa20.66■□□□□ 0.9
NIPSNAP3A-201ENST00000374767 PTPN23Q9H3S7 1636 aa20.65■□□□□ 0.9
NIPSNAP3A-201ENST00000374767 ARID3CA6NKF2 412 aa20.64■□□□□ 0.9
NIPSNAP3A-201ENST00000374767 PTPRKQ15262 1439 aa20.62■□□□□ 0.89
NIPSNAP3A-201ENST00000374767 UACAQ9BZF9 1416 aa20.62■□□□□ 0.89
NIPSNAP3A-201ENST00000374767 HFM1A2PYH4 1435 aa20.61■□□□□ 0.89
NIPSNAP3A-201ENST00000374767 PLEKHD1A6NEE1 506 aa20.6■□□□□ 0.89
NIPSNAP3A-201ENST00000374767 ADCY10Q96PN6 1610 aa20.59■□□□□ 0.89
NIPSNAP3A-201ENST00000374767 AKNAQ7Z591 1439 aa20.57■□□□□ 0.88
NIPSNAP3A-201ENST00000374767 GPATCH8Q9UKJ3 1502 aaKnown RBP20.54■□□□□ 0.88
NIPSNAP3A-201ENST00000374767 UHRF1BP1LA0JNW5 1464 aa20.53■□□□□ 0.88
NIPSNAP3A-201ENST00000374767 ERCC6L2Q5T890 1561 aa20.53■□□□□ 0.88
NIPSNAP3A-201ENST00000374767 NAIPQ13075 1403 aa20.53■□□□□ 0.88
NIPSNAP3A-201ENST00000374767 ABCC2Q92887 1545 aa20.52■□□□□ 0.88
NIPSNAP3A-201ENST00000374767 ABCC10Q5T3U5 1492 aa20.52■□□□□ 0.87
NIPSNAP3A-201ENST00000374767 ROCK1Q13464 1354 aa20.5■□□□□ 0.87
NIPSNAP3A-201ENST00000374767 ACIN1Q9UKV3 1341 aaKnown RBP20.49■□□□□ 0.87
NIPSNAP3A-201ENST00000374767 CFDP1Q9UEE9 299 aaPredicted RBP20.49■□□□□ 0.87
NIPSNAP3A-201ENST00000374767 KIF14Q15058 1648 aa20.48■□□□□ 0.87
NIPSNAP3A-201ENST00000374767 ITSN2Q9NZM3 1697 aa20.46■□□□□ 0.87
NIPSNAP3A-201ENST00000374767 MAPKBP1O60336 1514 aa20.46■□□□□ 0.87
NIPSNAP3A-201ENST00000374767 ABCC5O15440 1437 aa20.46■□□□□ 0.87
NIPSNAP3A-201ENST00000374767 DAPK1P53355 1430 aa20.46■□□□□ 0.87
NIPSNAP3A-201ENST00000374767 DNMT1P26358 1616 aaKnown RBP20.43■□□□□ 0.86
NIPSNAP3A-201ENST00000374767 OSCARQ8IYS5 282 aa20.43■□□□□ 0.86
NIPSNAP3A-201ENST00000374767 ZNF644Q9H582 1327 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms