RNA–Protein interactions for RNA: ENST00000373960.3

DES-201, Transcript of desmin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DES, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DES-201ENST00000373960 SNAPC4Q5SXM2 1469 aa33■■■□□ 2.87
DES-201ENST00000373960 RANGAP1P46060 587 aaPredicted RBP33■■■□□ 2.87
DES-201ENST00000373960 ERICH3Q5RHP9 1530 aa32.96■■■□□ 2.87
DES-201ENST00000373960 PRXQ9BXM0 1461 aa32.95■■■□□ 2.87
DES-201ENST00000373960 CENPBP07199 599 aaPredicted RBP32.93■■■□□ 2.86
DES-201ENST00000373960 GOLGA3Q08378 1498 aa32.91■■■□□ 2.86
DES-201ENST00000373960 CHMP7Q8WUX9 453 aaPredicted RBP32.86■■■□□ 2.85
DES-201ENST00000373960 KIF21BO75037 1637 aa32.85■■■□□ 2.85
DES-201ENST00000373960 GTF3C3Q9Y5Q9 886 aa32.83■■■□□ 2.85
DES-201ENST00000373960 ADAMTS12P58397 1594 aa32.82■■■□□ 2.85
DES-201ENST00000373960 CUL7Q14999 1698 aa32.82■■■□□ 2.85
DES-201ENST00000373960 FHAD1B1AJZ9 1412 aa32.81■■■□□ 2.84
DES-201ENST00000373960 TTBK1Q5TCY1 1321 aaPredicted RBP32.78■■■□□ 2.84
DES-201ENST00000373960 MAGI1Q96QZ7 1491 aaPredicted RBP32.76■■■□□ 2.83
DES-201ENST00000373960 ZNF316A6NFI3 1004 aaPredicted RBP32.73■■■□□ 2.83
DES-201ENST00000373960 SYNJ2O15056 1496 aa32.7■■■□□ 2.82
DES-201ENST00000373960 GRIN2AQ12879 1464 aa32.66■■■□□ 2.82
DES-201ENST00000373960 CHD1O14646 1710 aa32.64■■■□□ 2.82
DES-201ENST00000373960 P3H3Q8IVL6 736 aa32.53■■■□□ 2.8
DES-201ENST00000373960 CEP170Q5SW79 1584 aa32.52■■■□□ 2.8
DES-201ENST00000373960 CLIP1P30622 1438 aa32.5■■■□□ 2.79
DES-201ENST00000373960 VPS8Q8N3P4 1428 aa32.49■■■□□ 2.79
DES-201ENST00000373960 CTTNBP2Q8WZ74 1663 aa32.45■■■□□ 2.78
DES-201ENST00000373960 NUP160Q12769 1436 aa32.38■■■□□ 2.77
DES-201ENST00000373960 HNRNPUL2Q1KMD3 747 aaKnown RBP32.34■■■□□ 2.77
DES-201ENST00000373960 IQGAP2Q13576 1575 aa32.33■■■□□ 2.77
DES-201ENST00000373960 KIAA0586Q9BVV6 1533 aa32.33■■■□□ 2.77
DES-201ENST00000373960 JPH4Q96JJ6 628 aa32.31■■■□□ 2.76
DES-201ENST00000373960 OSCARQ8IYS5 282 aa32.31■■■□□ 2.76
DES-201ENST00000373960 MIER1Q8N108 512 aa32.27■■■□□ 2.76
DES-201ENST00000373960 ARHGAP35Q9NRY4 1499 aa32.27■■■□□ 2.76
DES-201ENST00000373960 FHOD3Q2V2M9 1422 aa32.22■■■□□ 2.75
DES-201ENST00000373960 ARAP1Q96P48 1450 aa32.2■■■□□ 2.74
DES-201ENST00000373960 APLP2Q06481 763 aa32.16■■■□□ 2.74
DES-201ENST00000373960 CLSPNQ9HAW4 1339 aa32.14■■■□□ 2.74
DES-201ENST00000373960 CLASP1Q7Z460 1538 aa32.13■■■□□ 2.73
DES-201ENST00000373960 PRG4Q92954 1404 aaPredicted RBP32.13■■■□□ 2.73
DES-201ENST00000373960 ERCC6L2Q5T890 1561 aa32.12■■■□□ 2.73
DES-201ENST00000373960 YTHDC1Q96MU7 727 aaKnown RBP32.11■■■□□ 2.73
DES-201ENST00000373960 DISP1Q96F81 1524 aa32.11■■■□□ 2.73
DES-201ENST00000373960 ATP1B4Q9UN42 357 aaPredicted RBP32.11■■■□□ 2.73
DES-201ENST00000373960 UGGT2Q9NYU1 1516 aa32.09■■■□□ 2.73
DES-201ENST00000373960 SAMD9Q5K651 1589 aa32.05■■■□□ 2.72
DES-201ENST00000373960 ARID3CA6NKF2 412 aa32.03■■■□□ 2.72
DES-201ENST00000373960 KIAA0556O60303 1618 aa32.02■■■□□ 2.72
DES-201ENST00000373960 EFCAB5A4FU69 1503 aa31.99■■■□□ 2.71
DES-201ENST00000373960 DHX57Q6P158 1386 aaKnown RBP31.98■■■□□ 2.71
DES-201ENST00000373960 SHROOM2Q13796 1616 aa31.97■■■□□ 2.71
DES-201ENST00000373960 CARMIL2Q6F5E8 1435 aa31.96■■■□□ 2.71
DES-201ENST00000373960 RRBP1Q9P2E9 1410 aaKnown RBP31.86■■■□□ 2.69
DES-201ENST00000373960 PTPRGP23470 1445 aa31.83■■■□□ 2.69
DES-201ENST00000373960 PLB1Q6P1J6 1458 aa31.83■■■□□ 2.69
DES-201ENST00000373960 PCF11O94913 1555 aaKnown RBP31.82■■■□□ 2.68
DES-201ENST00000373960 FMN1Q68DA7 1419 aa31.8■■■□□ 2.68
DES-201ENST00000373960 KANK4Q5T7N3 995 aaPredicted RBP31.77■■■□□ 2.68
DES-201ENST00000373960 ARHGEF11O15085 1522 aa31.73■■■□□ 2.67
DES-201ENST00000373960 CYB5RLQ6IPT4 315 aa31.69■■■□□ 2.66
DES-201ENST00000373960 CASKIN1Q8WXD9 1431 aa31.68■■■□□ 2.66
DES-201ENST00000373960 LRRIQ1Q96JM4 1722 aa31.66■■■□□ 2.66
DES-201ENST00000373960 RIMBP3CA6NJZ7 1639 aa31.63■■■□□ 2.65
DES-201ENST00000373960 RIMBP3BA6NNM3 1639 aa31.63■■■□□ 2.65
DES-201ENST00000373960 RIMBP3Q9UFD9 1639 aa31.63■■■□□ 2.65
DES-201ENST00000373960 RAPGEF6Q8TEU7 1601 aa31.63■■■□□ 2.65
DES-201ENST00000373960 CDK13Q14004 1512 aaKnown RBP31.63■■■□□ 2.65
DES-201ENST00000373960 FYCO1Q9BQS8 1478 aa31.62■■■□□ 2.65
DES-201ENST00000373960 CCNB3Q8WWL7 1395 aa31.61■■■□□ 2.65
DES-201ENST00000373960 NUP153P49790 1475 aaKnown RBP31.6■■■□□ 2.65
DES-201ENST00000373960 UACAQ9BZF9 1416 aa31.58■■■□□ 2.65
DES-201ENST00000373960 ABCA8O94911 1581 aa31.57■■■□□ 2.64
DES-201ENST00000373960 EPRSP07814 1512 aaKnown RBP31.53■■■□□ 2.64
DES-201ENST00000373960 HECW1Q76N89 1606 aa31.53■■■□□ 2.64
DES-201ENST00000373960 MAP3K1Q13233 1512 aa31.5■■■□□ 2.63
DES-201ENST00000373960 TIAM1Q13009 1591 aa31.48■■■□□ 2.63
DES-201ENST00000373960 SUPT16HQ9Y5B9 1047 aaKnown RBP31.48■■■□□ 2.63
DES-201ENST00000373960 ATP10BO94823 1461 aa31.46■■■□□ 2.63
DES-201ENST00000373960 ADCY10Q96PN6 1610 aa31.45■■■□□ 2.63
DES-201ENST00000373960 ABCC2Q92887 1545 aa31.44■■■□□ 2.62
DES-201ENST00000373960 MAGI3Q5TCQ9 1506 aa31.42■■■□□ 2.62
DES-201ENST00000373960 MAPKBP1O60336 1514 aa31.4■■■□□ 2.62
DES-201ENST00000373960 MTUS2Q5JR59 1369 aa31.39■■■□□ 2.62
DES-201ENST00000373960 CFAP43Q8NDM7 1665 aa31.38■■■□□ 2.61
DES-201ENST00000373960 LRRC9Q6ZRR7 1453 aa31.38■■■□□ 2.61
DES-201ENST00000373960 RAB3GAP2Q9H2M9 1393 aa31.36■■■□□ 2.61
DES-201ENST00000373960 DNAJC5Q9H3Z4 198 aa31.36■■■□□ 2.61
DES-201ENST00000373960 CCDC18Q5T9S5 1454 aa31.35■■■□□ 2.61
DES-201ENST00000373960 KCNH8Q96L42 1107 aa31.35■■■□□ 2.61
DES-201ENST00000373960 ZCCHC11Q5TAX3 1644 aaKnown RBP31.31■■■□□ 2.6
DES-201ENST00000373960 PLEKHD1A6NEE1 506 aa31.31■■■□□ 2.6
DES-201ENST00000373960 UHRF1BP1LA0JNW5 1464 aa31.3■■■□□ 2.6
DES-201ENST00000373960 NPM1P06748 294 aaKnown RBP eCLIP31.29■■■□□ 2.6
DES-201ENST00000373960 CDK11AQ9UQ88 783 aaPredicted RBP31.28■■■□□ 2.6
DES-201ENST00000373960 SETD5Q9C0A6 1442 aa31.26■■■□□ 2.59
DES-201ENST00000373960 KDM5BQ9UGL1 1544 aa31.26■■■□□ 2.59
DES-201ENST00000373960 ANP32EQ9BTT0 268 aa31.24■■■□□ 2.59
DES-201ENST00000373960 TSHZ2Q9NRE2 1034 aa31.21■■■□□ 2.59
DES-201ENST00000373960 ITGAEP38570 1179 aa31.2■■■□□ 2.58
DES-201ENST00000373960 PHLDB1Q86UU1 1377 aa31.19■■■□□ 2.58
DES-201ENST00000373960 KIF14Q15058 1648 aa31.18■■■□□ 2.58
DES-201ENST00000373960 TROQ12816 1431 aaPredicted RBP31.17■■■□□ 2.58
DES-201ENST00000373960 EHBP1L1Q8N3D4 1523 aa31.16■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms