RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 KIAA0586Q9BVV6 1533 aa36.05■■■■□ 3.36
TMEM54-202ENST00000373463 JPH4Q96JJ6 628 aa36.02■■■■□ 3.36
TMEM54-202ENST00000373463 RAPGEF2Q9Y4G8 1499 aa36■■■■□ 3.35
TMEM54-202ENST00000373463 PRG4Q92954 1404 aaPredicted RBP36■■■■□ 3.35
TMEM54-202ENST00000373463 CHIC1Q5VXU3 224 aa35.94■■■■□ 3.34
TMEM54-202ENST00000373463 PRXQ9BXM0 1461 aa35.92■■■■□ 3.34
TMEM54-202ENST00000373463 IQGAP2Q13576 1575 aa35.85■■■■□ 3.33
TMEM54-202ENST00000373463 CSRNP3Q8WYN3 585 aa35.76■■■■□ 3.32
TMEM54-202ENST00000373463 EEA1Q15075 1411 aa35.75■■■■□ 3.31
TMEM54-202ENST00000373463 CTTNBP2Q8WZ74 1663 aa35.73■■■■□ 3.31
TMEM54-202ENST00000373463 UGGT2Q9NYU1 1516 aa35.67■■■■□ 3.3
TMEM54-202ENST00000373463 DISP1Q96F81 1524 aa35.66■■■■□ 3.3
TMEM54-202ENST00000373463 FAM9AQ8IZU1 332 aaPredicted RBP35.64■■■■□ 3.3
TMEM54-202ENST00000373463 CARMIL2Q6F5E8 1435 aa35.58■■■■□ 3.29
TMEM54-202ENST00000373463 KIAA0556O60303 1618 aa35.54■■■■□ 3.28
TMEM54-202ENST00000373463 ADCY10Q96PN6 1610 aa35.54■■■■□ 3.28
TMEM54-202ENST00000373463 TNIKQ9UKE5 1360 aa35.53■■■■□ 3.28
TMEM54-202ENST00000373463 PTPRGP23470 1445 aa35.51■■■■□ 3.28
TMEM54-202ENST00000373463 KIF21BO75037 1637 aa35.5■■■■□ 3.27
TMEM54-202ENST00000373463 TRHP20396 242 aaPredicted RBP35.44■■■■□ 3.26
TMEM54-202ENST00000373463 TTBK1Q5TCY1 1321 aaPredicted RBP35.42■■■■□ 3.26
TMEM54-202ENST00000373463 GOLGA3Q08378 1498 aa35.35■■■■□ 3.25
TMEM54-202ENST00000373463 UHRF1BP1LA0JNW5 1464 aa35.3■■■■□ 3.24
TMEM54-202ENST00000373463 UACAQ9BZF9 1416 aa35.3■■■■□ 3.24
TMEM54-202ENST00000373463 SAMD9Q5K651 1589 aa35.29■■■■□ 3.24
TMEM54-202ENST00000373463 MAPKBP1O60336 1514 aa35.28■■■■□ 3.24
TMEM54-202ENST00000373463 ABCC2Q92887 1545 aa35.27■■■■□ 3.24
TMEM54-202ENST00000373463 KIF13AQ9H1H9 1805 aa35.23■■■■□ 3.23
TMEM54-202ENST00000373463 NPM1P06748 294 aaKnown RBP eCLIP35.22■■■■□ 3.23
TMEM54-202ENST00000373463 PLB1Q6P1J6 1458 aa35.21■■■■□ 3.23
TMEM54-202ENST00000373463 EHMT2Q96KQ7 1210 aa35.19■■■■□ 3.22
TMEM54-202ENST00000373463 ABCA8O94911 1581 aa35.18■■■■□ 3.22
TMEM54-202ENST00000373463 P3H3Q8IVL6 736 aa35.17■■■■□ 3.22
TMEM54-202ENST00000373463 KDM5BQ9UGL1 1544 aa35.15■■■■□ 3.22
TMEM54-202ENST00000373463 ABCC10Q5T3U5 1492 aa35.13■■■■□ 3.21
TMEM54-202ENST00000373463 DIP2BQ9P265 1576 aa35.12■■■■□ 3.21
TMEM54-202ENST00000373463 ZCCHC11Q5TAX3 1644 aaKnown RBP35.1■■■■□ 3.21
TMEM54-202ENST00000373463 RANGAP1P46060 587 aaPredicted RBP35.09■■■■□ 3.21
TMEM54-202ENST00000373463 UBTFP17480 764 aaKnown RBP35.06■■■■□ 3.2
TMEM54-202ENST00000373463 ASXL2Q76L83 1435 aa35.05■■■■□ 3.2
TMEM54-202ENST00000373463 FHOD3Q2V2M9 1422 aa35.04■■■■□ 3.2
TMEM54-202ENST00000373463 EFCAB5A4FU69 1503 aa35.02■■■■□ 3.2
TMEM54-202ENST00000373463 FAM69CQ0P6D2 419 aa35■■■■□ 3.19
TMEM54-202ENST00000373463 RAPGEF6Q8TEU7 1601 aa34.93■■■■□ 3.18
TMEM54-202ENST00000373463 ARHGAP35Q9NRY4 1499 aa34.91■■■■□ 3.18
TMEM54-202ENST00000373463 GLI2P10070 1586 aa34.87■■■■□ 3.17
TMEM54-202ENST00000373463 ATP10BO94823 1461 aa34.86■■■■□ 3.17
TMEM54-202ENST00000373463 EPRSP07814 1512 aaKnown RBP34.86■■■■□ 3.17
TMEM54-202ENST00000373463 WDR7Q9Y4E6 1490 aa34.84■■■■□ 3.17
TMEM54-202ENST00000373463 NUP153P49790 1475 aaKnown RBP34.84■■■■□ 3.17
TMEM54-202ENST00000373463 ARID3CA6NKF2 412 aa34.81■■■■□ 3.16
TMEM54-202ENST00000373463 TSPOAP1O95153 1857 aa34.8■■■■□ 3.16
TMEM54-202ENST00000373463 PPRC1Q5VV67 1664 aaKnown RBP34.77■■■■□ 3.16
TMEM54-202ENST00000373463 MAP3K4Q9Y6R4 1608 aa34.74■■■■□ 3.15
TMEM54-202ENST00000373463 FMN1Q68DA7 1419 aa34.65■■■■□ 3.14
TMEM54-202ENST00000373463 KCNH8Q96L42 1107 aa34.61■■■■□ 3.13
TMEM54-202ENST00000373463 CLIP1P30622 1438 aa34.59■■■■□ 3.13
TMEM54-202ENST00000373463 CFAP43Q8NDM7 1665 aa34.59■■■■□ 3.13
TMEM54-202ENST00000373463 CDK13Q14004 1512 aaKnown RBP34.59■■■■□ 3.13
TMEM54-202ENST00000373463 HECW1Q76N89 1606 aa34.56■■■■□ 3.12
TMEM54-202ENST00000373463 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.54■■■■□ 3.12
TMEM54-202ENST00000373463 HNRNPUL2Q1KMD3 747 aaKnown RBP34.54■■■■□ 3.12
TMEM54-202ENST00000373463 LRRIQ1Q96JM4 1722 aa34.54■■■■□ 3.12
TMEM54-202ENST00000373463 KDM6BO15054 1643 aa34.53■■■■□ 3.12
TMEM54-202ENST00000373463 ABCA9Q8IUA7 1624 aa34.52■■■■□ 3.12
TMEM54-202ENST00000373463 PCF11O94913 1555 aaKnown RBP34.5■■■■□ 3.11
TMEM54-202ENST00000373463 CD109Q6YHK3 1445 aa34.5■■■■□ 3.11
TMEM54-202ENST00000373463 LOC105371045A0A1W2PR82 267 aa34.48■■■■□ 3.11
TMEM54-202ENST00000373463 MAGI3Q5TCQ9 1506 aa34.48■■■■□ 3.11
TMEM54-202ENST00000373463 TEX14Q8IWB6 1497 aa34.46■■■■□ 3.11
TMEM54-202ENST00000373463 COL17A1Q9UMD9 1497 aaPredicted RBP34.45■■■■□ 3.1
TMEM54-202ENST00000373463 ATP1B4Q9UN42 357 aaPredicted RBP34.43■■■■□ 3.1
TMEM54-202ENST00000373463 CEP162Q5TB80 1403 aa34.43■■■■□ 3.1
TMEM54-202ENST00000373463 CASKIN1Q8WXD9 1431 aa34.43■■■■□ 3.1
TMEM54-202ENST00000373463 PLEKHD1A6NEE1 506 aa34.41■■■■□ 3.1
TMEM54-202ENST00000373463 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.35■■■■□ 3.09
TMEM54-202ENST00000373463 FYCO1Q9BQS8 1478 aa34.34■■■■□ 3.09
TMEM54-202ENST00000373463 TTC37Q6PGP7 1564 aa34.32■■■■□ 3.09
TMEM54-202ENST00000373463 CCDC18Q5T9S5 1454 aa34.27■■■■□ 3.08
TMEM54-202ENST00000373463 KIF14Q15058 1648 aa34.26■■■■□ 3.07
TMEM54-202ENST00000373463 TROQ12816 1431 aaPredicted RBP34.24■■■■□ 3.07
TMEM54-202ENST00000373463 ARAP3Q8WWN8 1544 aa34.2■■■■□ 3.06
TMEM54-202ENST00000373463 CDK11AQ9UQ88 783 aaPredicted RBP34.19■■■■□ 3.06
TMEM54-202ENST00000373463 NEO1Q92859 1461 aa34.18■■■■□ 3.06
TMEM54-202ENST00000373463 PHLDB1Q86UU1 1377 aa34.11■■■■□ 3.05
TMEM54-202ENST00000373463 FANCAO15360 1455 aa34.1■■■■□ 3.05
TMEM54-202ENST00000373463 PLCH2O75038 1416 aa34.09■■■■□ 3.05
TMEM54-202ENST00000373463 MYO5CQ9NQX4 1742 aa34.09■■■■□ 3.05
TMEM54-202ENST00000373463 FRMPD1Q5SYB0 1578 aa34.06■■■■□ 3.04
TMEM54-202ENST00000373463 CFAP74Q9C0B2 1584 aa34.06■■■■□ 3.04
TMEM54-202ENST00000373463 AKNAQ7Z591 1439 aa34.04■■■■□ 3.04
TMEM54-202ENST00000373463 VPS8Q8N3P4 1428 aa34.01■■■■□ 3.03
TMEM54-202ENST00000373463 RAPGEF3O95398 923 aa33.99■■■■□ 3.03
TMEM54-202ENST00000373463 CDC42BPBQ9Y5S2 1711 aa33.99■■■■□ 3.03
TMEM54-202ENST00000373463 RICTORQ6R327 1708 aa33.98■■■■□ 3.03
TMEM54-202ENST00000373463 PREX2Q70Z35 1606 aa33.95■■■■□ 3.03
TMEM54-202ENST00000373463 CDC42BPAQ5VT25 1732 aa33.94■■■■□ 3.02
TMEM54-202ENST00000373463 DENND4BO75064 1496 aaPredicted RBP33.93■■■■□ 3.02
TMEM54-202ENST00000373463 ARHGAP5Q13017 1502 aa33.91■■■■□ 3.02
TMEM54-202ENST00000373463 ADGRL1O94910 1474 aa33.9■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms