RNA–Protein interactions for RNA: ENST00000373104.5

CSF3R-204, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF3R, Length 2,953 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-204ENST00000373104 ATP1B4Q9UN42 357 aaPredicted RBP17.47■□□□□ 0.39
CSF3R-204ENST00000373104 SETD5Q9C0A6 1442 aa17.46■□□□□ 0.38
CSF3R-204ENST00000373104 PRXQ9BXM0 1461 aa17.44■□□□□ 0.38
CSF3R-204ENST00000373104 FANCIQ9NVI1 1328 aa17.44■□□□□ 0.38
CSF3R-204ENST00000373104 ERICH3Q5RHP9 1530 aa17.38■□□□□ 0.37
CSF3R-204ENST00000373104 ARHGAP35Q9NRY4 1499 aa17.36■□□□□ 0.37
CSF3R-204ENST00000373104 UNC13AQ9UPW8 1703 aa17.35■□□□□ 0.37
CSF3R-204ENST00000373104 TOP2BQ02880 1626 aa17.35■□□□□ 0.37
CSF3R-204ENST00000373104 DEKP35659 375 aaKnown RBP17.34■□□□□ 0.37
CSF3R-204ENST00000373104 P3H3Q8IVL6 736 aa17.34■□□□□ 0.37
CSF3R-204ENST00000373104 TIMELESSQ9UNS1 1208 aa17.33■□□□□ 0.37
CSF3R-204ENST00000373104 TONSLQ96HA7 1378 aa17.33■□□□□ 0.36
CSF3R-204ENST00000373104 ATAD2BQ9ULI0 1458 aa17.33■□□□□ 0.36
CSF3R-204ENST00000373104 PHLDB1Q86UU1 1377 aa17.33■□□□□ 0.36
CSF3R-204ENST00000373104 NBR1Q14596 966 aa17.32■□□□□ 0.36
CSF3R-204ENST00000373104 KIF27Q86VH2 1401 aa17.32■□□□□ 0.36
CSF3R-204ENST00000373104 B4GALNT3Q6L9W6 998 aa17.31■□□□□ 0.36
CSF3R-204ENST00000373104 PPP4R2Q9NY27 417 aa17.27■□□□□ 0.36
CSF3R-204ENST00000373104 PEG3Q9GZU2 1588 aa17.27■□□□□ 0.36
CSF3R-204ENST00000373104 FAM9BQ8IZU0 186 aa17.24■□□□□ 0.35
CSF3R-204ENST00000373104 MYT1LQ9UL68 1186 aa17.23■□□□□ 0.35
CSF3R-204ENST00000373104 LRRC9Q6ZRR7 1453 aa17.22■□□□□ 0.35
CSF3R-204ENST00000373104 CCDC184Q52MB2 194 aa17.2■□□□□ 0.34
CSF3R-204ENST00000373104 TIAM1Q13009 1591 aa17.2■□□□□ 0.34
CSF3R-204ENST00000373104 NOP58Q9Y2X3 529 aaKnown RBP17.19■□□□□ 0.34
CSF3R-204ENST00000373104 BICRAQ9NZM4 1560 aa17.18■□□□□ 0.34
CSF3R-204ENST00000373104 PAK3O75914 559 aaPredicted RBP17.17■□□□□ 0.34
CSF3R-204ENST00000373104 BIVM-ERCC5R4GMW8 1640 aa17.17■□□□□ 0.34
CSF3R-204ENST00000373104 PRKCSHP14314 528 aaPredicted RBP17.16■□□□□ 0.34
CSF3R-204ENST00000373104 CUX1P39880 1505 aa17.16■□□□□ 0.34
CSF3R-204ENST00000373104 CNGB1Q14028 1251 aaPredicted RBP17.16■□□□□ 0.34
CSF3R-204ENST00000373104 ERICH6BQ5W0A0 696 aa17.15■□□□□ 0.34
CSF3R-204ENST00000373104 WASHC2AQ641Q2 1341 aa17.14■□□□□ 0.33
CSF3R-204ENST00000373104 HSPA5P11021 654 aaKnown RBP17.13■□□□□ 0.33
CSF3R-204ENST00000373104 MRS2Q9HD23 443 aa17.13■□□□□ 0.33
CSF3R-204ENST00000373104 IGF1RP08069 1367 aa17.1■□□□□ 0.33
CSF3R-204ENST00000373104 RTL5Q5HYW3 569 aaPredicted RBP17.09■□□□□ 0.33
CSF3R-204ENST00000373104 CARMIL1Q5VZK9 1371 aa17.08■□□□□ 0.33
CSF3R-204ENST00000373104 SENP3-EIF4A1A0A087X0R7 540 aa17.08■□□□□ 0.33
CSF3R-204ENST00000373104 FHAD1B1AJZ9 1412 aa17.07■□□□□ 0.32
CSF3R-204ENST00000373104 ANO8Q9HCE9 1232 aaPredicted RBP17.07■□□□□ 0.32
CSF3R-204ENST00000373104 MAP3K1Q13233 1512 aa17.06■□□□□ 0.32
CSF3R-204ENST00000373104 EIF4G2P78344 907 aaKnown RBP eCLIP17.06■□□□□ 0.32
CSF3R-204ENST00000373104 ANP32AP39687 249 aaKnown RBP17.06■□□□□ 0.32
CSF3R-204ENST00000373104 CCDC18Q5T9S5 1454 aa17.05■□□□□ 0.32
CSF3R-204ENST00000373104 PRKRIP1Q9H875 184 aaPredicted RBP17.04■□□□□ 0.32
CSF3R-204ENST00000373104 CCDC136Q96JN2 1154 aa17.03■□□□□ 0.32
CSF3R-204ENST00000373104 FHOD3Q2V2M9 1422 aa17.03■□□□□ 0.32
CSF3R-204ENST00000373104 ZBTB47Q9UFB7 747 aaPredicted RBP17.02■□□□□ 0.32
CSF3R-204ENST00000373104 CHIC2Q9UKJ5 165 aa17.01■□□□□ 0.31
CSF3R-204ENST00000373104 ZBED9Q6R2W3 1325 aa17.01■□□□□ 0.31
CSF3R-204ENST00000373104 RRP7BPQ9NSQ0 103 aa17.01■□□□□ 0.31
CSF3R-204ENST00000373104 UACAQ9BZF9 1416 aa17.01■□□□□ 0.31
CSF3R-204ENST00000373104 RTN4Q9NQC3 1192 aaKnown RBP17■□□□□ 0.31
CSF3R-204ENST00000373104 C11orf95C9JLR9 678 aaPredicted RBP17■□□□□ 0.31
CSF3R-204ENST00000373104 IPO9Q96P70 1041 aaKnown RBP16.99■□□□□ 0.31
CSF3R-204ENST00000373104 PCF11O94913 1555 aaKnown RBP16.98■□□□□ 0.31
CSF3R-204ENST00000373104 NPM2Q86SE8 214 aaKnown RBP16.98■□□□□ 0.31
CSF3R-204ENST00000373104 POLR3GLQ9BT43 218 aa16.98■□□□□ 0.31
CSF3R-204ENST00000373104 MTUS2Q5JR59 1369 aa16.97■□□□□ 0.31
CSF3R-204ENST00000373104 PTPRKQ15262 1439 aa16.97■□□□□ 0.31
CSF3R-204ENST00000373104 FGD6Q6ZV73 1430 aa16.96■□□□□ 0.31
CSF3R-204ENST00000373104 SALL2Q9Y467 1007 aaPredicted RBP16.95■□□□□ 0.3
CSF3R-204ENST00000373104 CNTLNQ9NXG0 1405 aa16.95■□□□□ 0.3
CSF3R-204ENST00000373104 FOXD1Q16676 465 aa16.95■□□□□ 0.3
CSF3R-204ENST00000373104 IL27Q8NEV9 243 aa16.95■□□□□ 0.3
CSF3R-204ENST00000373104 AKNAQ7Z591 1439 aa16.95■□□□□ 0.3
CSF3R-204ENST00000373104 AQRO60306 1485 aaKnown RBP eCLIP16.94■□□□□ 0.32e-11■■■■■ 56.9
CSF3R-204ENST00000373104 HFM1A2PYH4 1435 aa16.93■□□□□ 0.3
CSF3R-204ENST00000373104 L3MBTL2Q969R5 705 aa16.92■□□□□ 0.3
CSF3R-204ENST00000373104 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.92■□□□□ 0.3
CSF3R-204ENST00000373104 NAIPQ13075 1403 aa16.9■□□□□ 0.3
CSF3R-204ENST00000373104 CCDC7Q96M83 1385 aa16.89■□□□□ 0.29
CSF3R-204ENST00000373104 LAS1LQ9Y4W2 734 aaKnown RBP16.89■□□□□ 0.29
CSF3R-204ENST00000373104 FMN1Q68DA7 1419 aa16.88■□□□□ 0.29
CSF3R-204ENST00000373104 CFTRP13569 1480 aa16.87■□□□□ 0.29
CSF3R-204ENST00000373104 CFAP43Q8NDM7 1665 aa16.87■□□□□ 0.29
CSF3R-204ENST00000373104 NUDCQ9Y266 331 aa16.86■□□□□ 0.29
CSF3R-204ENST00000373104 PTPN23Q9H3S7 1636 aa16.86■□□□□ 0.29
CSF3R-204ENST00000373104 KDM5BQ9UGL1 1544 aa16.86■□□□□ 0.29
CSF3R-204ENST00000373104 CASKIN1Q8WXD9 1431 aa16.85■□□□□ 0.29
CSF3R-204ENST00000373104 FYCO1Q9BQS8 1478 aa16.84■□□□□ 0.29
CSF3R-204ENST00000373104 NEFMP07197 916 aa16.84■□□□□ 0.29
CSF3R-204ENST00000373104 KIF7Q2M1P5 1343 aa16.84■□□□□ 0.29
CSF3R-204ENST00000373104 MPHOSPH9Q99550 1183 aa16.83■□□□□ 0.29
CSF3R-204ENST00000373104 NCOA2Q15596 1464 aa16.83■□□□□ 0.28
CSF3R-204ENST00000373104 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.83■□□□□ 0.28
CSF3R-204ENST00000373104 FGD5Q6ZNL6 1462 aa16.83■□□□□ 0.28
CSF3R-204ENST00000373104 NBPF8Q3BBV2 869 aa16.82■□□□□ 0.28
CSF3R-204ENST00000373104 NCOA1Q15788 1441 aa16.81■□□□□ 0.28
CSF3R-204ENST00000373104 ZNF326Q5BKZ1 582 aaKnown RBP16.8■□□□□ 0.28
CSF3R-204ENST00000373104 NCAPD3P42695 1498 aa16.79■□□□□ 0.28
CSF3R-204ENST00000373104 SMG6Q86US8 1419 aaKnown RBP16.79■□□□□ 0.28
CSF3R-204ENST00000373104 MYOM3Q5VTT5 1437 aa16.77■□□□□ 0.28
CSF3R-204ENST00000373104 ARID3CA6NKF2 412 aa16.77■□□□□ 0.28
CSF3R-204ENST00000373104 TMC1Q8TDI8 760 aa16.76■□□□□ 0.27
CSF3R-204ENST00000373104 EXOC6Q8TAG9 804 aa16.73■□□□□ 0.27
CSF3R-204ENST00000373104 HMGXB3Q12766 1538 aa16.72■□□□□ 0.27
CSF3R-204ENST00000373104 RNF123Q5XPI4 1314 aa16.72■□□□□ 0.27
CSF3R-204ENST00000373104 PDE4AP27815 886 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms