RNA–Protein interactions for RNA: ENST00000373104.5

CSF3R-204, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF3R, Length 2,953 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-204ENST00000373104 NISCHQ9Y2I1 1504 aa23.63■■□□□ 1.37
CSF3R-204ENST00000373104 SHROOM4Q9ULL8 1493 aa21.22■□□□□ 0.99
CSF3R-204ENST00000373104 SUPT5HO00267 1087 aaKnown RBP21.15■□□□□ 0.98
CSF3R-204ENST00000373104 HRCP23327 699 aa21.03■□□□□ 0.96
CSF3R-204ENST00000373104 PCGF6Q9BYE7 350 aa20.83■□□□□ 0.92
CSF3R-204ENST00000373104 PPARGC1BQ86YN6 1023 aaKnown RBP20.75■□□□□ 0.91
CSF3R-204ENST00000373104 MYO15BQ96JP2 1530 aa20.6■□□□□ 0.89
CSF3R-204ENST00000373104 CHIC1Q5VXU3 224 aa20.59■□□□□ 0.89
CSF3R-204ENST00000373104 LOC105371045A0A1W2PR82 267 aa20.23■□□□□ 0.83
CSF3R-204ENST00000373104 DCAF8L2P0C7V8 631 aa20.22■□□□□ 0.83
CSF3R-204ENST00000373104 ZCCHC6Q5VYS8 1495 aaKnown RBP20.05■□□□□ 0.8
CSF3R-204ENST00000373104 TRIM26Q12899 539 aaPredicted RBP20.05■□□□□ 0.8
CSF3R-204ENST00000373104 PELP1Q8IZL8 1130 aaKnown RBP20.04■□□□□ 0.8
CSF3R-204ENST00000373104 DCAF1Q9Y4B6 1507 aa20.03■□□□□ 0.8
CSF3R-204ENST00000373104 SCAF1Q9H7N4 1312 aaKnown RBP19.87■□□□□ 0.77
CSF3R-204ENST00000373104 ZEB1P37275 1124 aaPredicted RBP19.8■□□□□ 0.76
CSF3R-204ENST00000373104 CCDC180Q9P1Z9 1646 aa19.72■□□□□ 0.75
CSF3R-204ENST00000373104 EHMT2Q96KQ7 1210 aa19.64■□□□□ 0.73
CSF3R-204ENST00000373104 FAM9AQ8IZU1 332 aaPredicted RBP19.61■□□□□ 0.73
CSF3R-204ENST00000373104 TRIM41Q8WV44 630 aa19.49■□□□□ 0.71
CSF3R-204ENST00000373104 NEUROD1Q13562 356 aa19.41■□□□□ 0.7
CSF3R-204ENST00000373104 ACIN1Q9UKV3 1341 aaKnown RBP19.41■□□□□ 0.7
CSF3R-204ENST00000373104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.35■□□□□ 0.69
CSF3R-204ENST00000373104 GTF3C3Q9Y5Q9 886 aa19.33■□□□□ 0.68
CSF3R-204ENST00000373104 CCER1Q8TC90 406 aaPredicted RBP19.3■□□□□ 0.68
CSF3R-204ENST00000373104 CENPBP07199 599 aaPredicted RBP19.23■□□□□ 0.67
CSF3R-204ENST00000373104 DIEXFQ68CQ4 756 aaKnown RBP19.21■□□□□ 0.67
CSF3R-204ENST00000373104 MYT1Q01538 1121 aa19.19■□□□□ 0.66
CSF3R-204ENST00000373104 TTBK1Q5TCY1 1321 aaPredicted RBP19.13■□□□□ 0.65
CSF3R-204ENST00000373104 RSF1Q96T23 1441 aaPredicted RBP19.07■□□□□ 0.64
CSF3R-204ENST00000373104 YTHDC1Q96MU7 727 aaKnown RBP19.03■□□□□ 0.64
CSF3R-204ENST00000373104 ABCC9O60706 1549 aa19.01■□□□□ 0.63
CSF3R-204ENST00000373104 RB1CC1Q8TDY2 1594 aa18.95■□□□□ 0.62
CSF3R-204ENST00000373104 SCRIBQ14160 1630 aa18.83■□□□□ 0.6
CSF3R-204ENST00000373104 ZNF316A6NFI3 1004 aaPredicted RBP18.81■□□□□ 0.6
CSF3R-204ENST00000373104 MIER1Q8N108 512 aa18.72■□□□□ 0.59
CSF3R-204ENST00000373104 CECR2Q9BXF3 1484 aa18.61■□□□□ 0.57
CSF3R-204ENST00000373104 HNRNPUL2Q1KMD3 747 aaKnown RBP18.59■□□□□ 0.57
CSF3R-204ENST00000373104 UBTFP17480 764 aaKnown RBP18.57■□□□□ 0.56
CSF3R-204ENST00000373104 CEP162Q5TB80 1403 aa18.54■□□□□ 0.56
CSF3R-204ENST00000373104 MROH2BQ7Z745 1585 aa18.52■□□□□ 0.56
CSF3R-204ENST00000373104 WRNQ14191 1432 aaPredicted RBP eCLIP18.48■□□□□ 0.55
CSF3R-204ENST00000373104 WIZO95785 1651 aa18.44■□□□□ 0.54
CSF3R-204ENST00000373104 CCDC88BA6NC98 1476 aa18.41■□□□□ 0.54
CSF3R-204ENST00000373104 SOGA1O94964 1423 aa18.38■□□□□ 0.53
CSF3R-204ENST00000373104 ABCC8Q09428 1581 aa18.38■□□□□ 0.53
CSF3R-204ENST00000373104 TNIKQ9UKE5 1360 aa18.37■□□□□ 0.53
CSF3R-204ENST00000373104 CSRNP3Q8WYN3 585 aa18.37■□□□□ 0.53
CSF3R-204ENST00000373104 SUPT16HQ9Y5B9 1047 aaKnown RBP18.36■□□□□ 0.53
CSF3R-204ENST00000373104 RANGAP1P46060 587 aaPredicted RBP18.3■□□□□ 0.52
CSF3R-204ENST00000373104 APLP2Q06481 763 aa18.27■□□□□ 0.51
CSF3R-204ENST00000373104 RUSC2Q8N2Y8 1516 aa18.26■□□□□ 0.51
CSF3R-204ENST00000373104 TSHZ2Q9NRE2 1034 aa18.24■□□□□ 0.51
CSF3R-204ENST00000373104 ANP32EQ9BTT0 268 aa18.21■□□□□ 0.51
CSF3R-204ENST00000373104 BAZ1AQ9NRL2 1556 aaPredicted RBP18.19■□□□□ 0.5
CSF3R-204ENST00000373104 EIF4G1Q04637 1599 aaKnown RBP18.18■□□□□ 0.5
CSF3R-204ENST00000373104 CLSPNQ9HAW4 1339 aa18.17■□□□□ 0.5
CSF3R-204ENST00000373104 BCANQ96GW7 911 aa18.17■□□□□ 0.5
CSF3R-204ENST00000373104 GOLGA3Q08378 1498 aa18.15■□□□□ 0.5
CSF3R-204ENST00000373104 BCL11AQ9H165 835 aa18.11■□□□□ 0.49
CSF3R-204ENST00000373104 EEA1Q15075 1411 aa18.11■□□□□ 0.49
CSF3R-204ENST00000373104 CLIP1P30622 1438 aa18.08■□□□□ 0.48
CSF3R-204ENST00000373104 KCNH8Q96L42 1107 aa18.05■□□□□ 0.48
CSF3R-204ENST00000373104 NACADO15069 1562 aa18.04■□□□□ 0.48
CSF3R-204ENST00000373104 TOP2AP11388 1531 aaKnown RBP18.01■□□□□ 0.47
CSF3R-204ENST00000373104 FKBP8Q14318 412 aa17.99■□□□□ 0.47
CSF3R-204ENST00000373104 DHX57Q6P158 1386 aaKnown RBP17.99■□□□□ 0.47
CSF3R-204ENST00000373104 VPS8Q8N3P4 1428 aa17.99■□□□□ 0.47
CSF3R-204ENST00000373104 SMARCA2P51531 1590 aa17.97■□□□□ 0.47
CSF3R-204ENST00000373104 CEP164Q9UPV0 1460 aa17.96■□□□□ 0.47
CSF3R-204ENST00000373104 ITGAEP38570 1179 aa17.95■□□□□ 0.46
CSF3R-204ENST00000373104 NEFLP07196 543 aa17.86■□□□□ 0.45
CSF3R-204ENST00000373104 KANK4Q5T7N3 995 aaPredicted RBP17.86■□□□□ 0.45
CSF3R-204ENST00000373104 RBM19Q9Y4C8 960 aaKnown RBP17.85■□□□□ 0.45
CSF3R-204ENST00000373104 DDX10Q13206 875 aaKnown RBP17.85■□□□□ 0.45
CSF3R-204ENST00000373104 RAPGEF2Q9Y4G8 1499 aa17.85■□□□□ 0.45
CSF3R-204ENST00000373104 SMARCA4P51532 1647 aa17.83■□□□□ 0.44
CSF3R-204ENST00000373104 TRIM52Q96A61 297 aa17.81■□□□□ 0.44
CSF3R-204ENST00000373104 KIF21BO75037 1637 aa17.79■□□□□ 0.44
CSF3R-204ENST00000373104 HIRIP3Q9BW71 556 aaPredicted RBP17.75■□□□□ 0.43
CSF3R-204ENST00000373104 SYNJ1O43426 1573 aa17.73■□□□□ 0.43
CSF3R-204ENST00000373104 BAZ1BQ9UIG0 1483 aaKnown RBP17.71■□□□□ 0.43
CSF3R-204ENST00000373104 PABPN1Q86U42 306 aaKnown RBP eCLIP17.7■□□□□ 0.424e-7■■□□□ 12.2
CSF3R-204ENST00000373104 SIN3AQ96ST3 1273 aa17.67■□□□□ 0.42
CSF3R-204ENST00000373104 ERICH6Q7L0X2 663 aa17.65■□□□□ 0.42
CSF3R-204ENST00000373104 CCNB3Q8WWL7 1395 aa17.64■□□□□ 0.42
CSF3R-204ENST00000373104 MSH5O43196 834 aa17.64■□□□□ 0.42
CSF3R-204ENST00000373104 ANP32CO43423 234 aa17.63■□□□□ 0.41
CSF3R-204ENST00000373104 RAB3GAP2Q9H2M9 1393 aa17.62■□□□□ 0.41
CSF3R-204ENST00000373104 IRX6P78412 446 aaPredicted RBP17.61■□□□□ 0.41
CSF3R-204ENST00000373104 RRBP1Q9P2E9 1410 aaKnown RBP17.6■□□□□ 0.41
CSF3R-204ENST00000373104 ARAP1Q96P48 1450 aa17.58■□□□□ 0.41
CSF3R-204ENST00000373104 PPP1R15AO75807 674 aaPredicted RBP17.56■□□□□ 0.4
CSF3R-204ENST00000373104 FAM50AQ14320 339 aaKnown RBP17.55■□□□□ 0.4
CSF3R-204ENST00000373104 CDK11AQ9UQ88 783 aaPredicted RBP17.54■□□□□ 0.4
CSF3R-204ENST00000373104 CCER2I3L3R5 266 aa17.51■□□□□ 0.39
CSF3R-204ENST00000373104 WDR97A6NE52 1622 aa17.51■□□□□ 0.39
CSF3R-204ENST00000373104 HNRNPUQ00839 825 aaKnown RBP eCLIP17.49■□□□□ 0.39
CSF3R-204ENST00000373104 MAPKBP1O60336 1514 aa17.49■□□□□ 0.39
CSF3R-204ENST00000373104 CUX2O14529 1486 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms