RNA–Protein interactions for RNA: ENST00000372422.6

YIPF3-202, Transcript of Yip1 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF3, Length 1,576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-202ENST00000372422 NUP160Q12769 1436 aa24.09■■□□□ 1.45
YIPF3-202ENST00000372422 CEP170Q5SW79 1584 aa24.06■■□□□ 1.44
YIPF3-202ENST00000372422 KIAA0586Q9BVV6 1533 aa24.05■■□□□ 1.44
YIPF3-202ENST00000372422 CEP162Q5TB80 1403 aa24.04■■□□□ 1.44
YIPF3-202ENST00000372422 IQGAP2Q13576 1575 aa24.02■■□□□ 1.44
YIPF3-202ENST00000372422 CLIP1P30622 1438 aa23.99■■□□□ 1.43
YIPF3-202ENST00000372422 RANGAP1P46060 587 aaPredicted RBP23.99■■□□□ 1.43
YIPF3-202ENST00000372422 OSCARQ8IYS5 282 aa23.94■■□□□ 1.42
YIPF3-202ENST00000372422 EFCAB5A4FU69 1503 aa23.91■■□□□ 1.42
YIPF3-202ENST00000372422 UGGT2Q9NYU1 1516 aa23.9■■□□□ 1.42
YIPF3-202ENST00000372422 JPH4Q96JJ6 628 aa23.89■■□□□ 1.41
YIPF3-202ENST00000372422 CLASP1Q7Z460 1538 aa23.88■■□□□ 1.41
YIPF3-202ENST00000372422 ARHGAP35Q9NRY4 1499 aa23.86■■□□□ 1.41
YIPF3-202ENST00000372422 SAMD9Q5K651 1589 aa23.83■■□□□ 1.41
YIPF3-202ENST00000372422 CARMIL2Q6F5E8 1435 aa23.82■■□□□ 1.4
YIPF3-202ENST00000372422 SHROOM2Q13796 1616 aa23.8■■□□□ 1.4
YIPF3-202ENST00000372422 P3H3Q8IVL6 736 aa23.78■■□□□ 1.4
YIPF3-202ENST00000372422 PRG4Q92954 1404 aaPredicted RBP23.77■■□□□ 1.4
YIPF3-202ENST00000372422 DISP1Q96F81 1524 aa23.77■■□□□ 1.4
YIPF3-202ENST00000372422 KIAA0556O60303 1618 aa23.77■■□□□ 1.4
YIPF3-202ENST00000372422 ARAP1Q96P48 1450 aa23.76■■□□□ 1.39
YIPF3-202ENST00000372422 FHOD3Q2V2M9 1422 aa23.75■■□□□ 1.39
YIPF3-202ENST00000372422 VPS8Q8N3P4 1428 aa23.71■■□□□ 1.39
YIPF3-202ENST00000372422 FMN1Q68DA7 1419 aa23.71■■□□□ 1.39
YIPF3-202ENST00000372422 PTPRGP23470 1445 aa23.6■■□□□ 1.37
YIPF3-202ENST00000372422 ERCC6L2Q5T890 1561 aa23.59■■□□□ 1.37
YIPF3-202ENST00000372422 TTBK1Q5TCY1 1321 aaPredicted RBP23.59■■□□□ 1.37
YIPF3-202ENST00000372422 CASKIN1Q8WXD9 1431 aa23.56■■□□□ 1.36
YIPF3-202ENST00000372422 FYCO1Q9BQS8 1478 aa23.55■■□□□ 1.36
YIPF3-202ENST00000372422 APLP2Q06481 763 aa23.54■■□□□ 1.36
YIPF3-202ENST00000372422 PCF11O94913 1555 aaKnown RBP23.53■■□□□ 1.36
YIPF3-202ENST00000372422 ATP1B4Q9UN42 357 aaPredicted RBP23.52■■□□□ 1.36
YIPF3-202ENST00000372422 ARHGEF11O15085 1522 aa23.5■■□□□ 1.35
YIPF3-202ENST00000372422 HECW1Q76N89 1606 aa23.48■■□□□ 1.35
YIPF3-202ENST00000372422 RAPGEF6Q8TEU7 1601 aa23.48■■□□□ 1.35
YIPF3-202ENST00000372422 PLB1Q6P1J6 1458 aa23.47■■□□□ 1.35
YIPF3-202ENST00000372422 UACAQ9BZF9 1416 aa23.45■■□□□ 1.35
YIPF3-202ENST00000372422 ABCA8O94911 1581 aa23.45■■□□□ 1.34
YIPF3-202ENST00000372422 CCDC18Q5T9S5 1454 aa23.42■■□□□ 1.34
YIPF3-202ENST00000372422 MAP3K1Q13233 1512 aa23.4■■□□□ 1.34
YIPF3-202ENST00000372422 RIMBP3CA6NJZ7 1639 aa23.4■■□□□ 1.34
YIPF3-202ENST00000372422 RIMBP3BA6NNM3 1639 aa23.4■■□□□ 1.34
YIPF3-202ENST00000372422 RIMBP3Q9UFD9 1639 aa23.4■■□□□ 1.34
YIPF3-202ENST00000372422 NUP153P49790 1475 aaKnown RBP23.39■■□□□ 1.34
YIPF3-202ENST00000372422 ABCC2Q92887 1545 aa23.38■■□□□ 1.33
YIPF3-202ENST00000372422 UHRF1BP1LA0JNW5 1464 aa23.37■■□□□ 1.33
YIPF3-202ENST00000372422 EPRSP07814 1512 aaKnown RBP23.37■■□□□ 1.33
YIPF3-202ENST00000372422 TIAM1Q13009 1591 aa23.36■■□□□ 1.33
YIPF3-202ENST00000372422 CFAP43Q8NDM7 1665 aa23.34■■□□□ 1.33
YIPF3-202ENST00000372422 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.32■■□□□ 1.32
YIPF3-202ENST00000372422 HNRNPUL2Q1KMD3 747 aaKnown RBP23.32■■□□□ 1.32
YIPF3-202ENST00000372422 ARID3CA6NKF2 412 aa23.31■■□□□ 1.32
YIPF3-202ENST00000372422 CDK11AQ9UQ88 783 aaPredicted RBP23.31■■□□□ 1.32
YIPF3-202ENST00000372422 LRRIQ1Q96JM4 1722 aa23.3■■□□□ 1.32
YIPF3-202ENST00000372422 CDK13Q14004 1512 aaKnown RBP23.3■■□□□ 1.32
YIPF3-202ENST00000372422 ATP10BO94823 1461 aa23.27■■□□□ 1.32
YIPF3-202ENST00000372422 CYB5RLQ6IPT4 315 aa23.27■■□□□ 1.32
YIPF3-202ENST00000372422 ADCY10Q96PN6 1610 aa23.27■■□□□ 1.32
YIPF3-202ENST00000372422 LRRC9Q6ZRR7 1453 aa23.26■■□□□ 1.31
YIPF3-202ENST00000372422 MTUS2Q5JR59 1369 aa23.26■■□□□ 1.31
YIPF3-202ENST00000372422 KDM5BQ9UGL1 1544 aa23.25■■□□□ 1.31
YIPF3-202ENST00000372422 KANK4Q5T7N3 995 aaPredicted RBP23.24■■□□□ 1.31
YIPF3-202ENST00000372422 PPARGC1BQ86YN6 1023 aaKnown RBP23.24■■□□□ 1.31
YIPF3-202ENST00000372422 NPM1P06748 294 aaKnown RBP eCLIP23.23■■□□□ 1.31
YIPF3-202ENST00000372422 EHBP1L1Q8N3D4 1523 aa23.21■■□□□ 1.31
YIPF3-202ENST00000372422 PLEKHD1A6NEE1 506 aa23.21■■□□□ 1.31
YIPF3-202ENST00000372422 ZCCHC11Q5TAX3 1644 aaKnown RBP23.2■■□□□ 1.3
YIPF3-202ENST00000372422 DNAJC5Q9H3Z4 198 aa23.18■■□□□ 1.3
YIPF3-202ENST00000372422 TROQ12816 1431 aaPredicted RBP23.16■■□□□ 1.3
YIPF3-202ENST00000372422 MAGI3Q5TCQ9 1506 aa23.15■■□□□ 1.3
YIPF3-202ENST00000372422 SUPT6HQ7KZ85 1726 aaKnown RBP23.11■■□□□ 1.29
YIPF3-202ENST00000372422 NCOA2Q15596 1464 aa23.06■■□□□ 1.28
YIPF3-202ENST00000372422 WDR7Q9Y4E6 1490 aa23.06■■□□□ 1.28
YIPF3-202ENST00000372422 KIF14Q15058 1648 aa23.06■■□□□ 1.28
YIPF3-202ENST00000372422 ASXL2Q76L83 1435 aa23.05■■□□□ 1.28
YIPF3-202ENST00000372422 MAPKBP1O60336 1514 aa23.03■■□□□ 1.28
YIPF3-202ENST00000372422 KCNH8Q96L42 1107 aa23■■□□□ 1.27
YIPF3-202ENST00000372422 PHLDB1Q86UU1 1377 aa22.99■■□□□ 1.27
YIPF3-202ENST00000372422 CCNB3Q8WWL7 1395 aa22.98■■□□□ 1.27
YIPF3-202ENST00000372422 TRIM26Q12899 539 aaPredicted RBP22.97■■□□□ 1.27
YIPF3-202ENST00000372422 MYOM3Q5VTT5 1437 aa22.96■■□□□ 1.27
YIPF3-202ENST00000372422 ABCC10Q5T3U5 1492 aa22.95■■□□□ 1.26
YIPF3-202ENST00000372422 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.92■■□□□ 1.26
YIPF3-202ENST00000372422 ITSN2Q9NZM3 1697 aa22.91■■□□□ 1.26
YIPF3-202ENST00000372422 RRBP1Q9P2E9 1410 aaKnown RBP22.91■■□□□ 1.26
YIPF3-202ENST00000372422 MIA2Q96PC5 1412 aa22.9■■□□□ 1.26
YIPF3-202ENST00000372422 FGD6Q6ZV73 1430 aa22.9■■□□□ 1.26
YIPF3-202ENST00000372422 GPATCH8Q9UKJ3 1502 aaKnown RBP22.89■■□□□ 1.25
YIPF3-202ENST00000372422 TTC37Q6PGP7 1564 aa22.88■■□□□ 1.25
YIPF3-202ENST00000372422 CFDP1Q9UEE9 299 aaPredicted RBP22.87■■□□□ 1.25
YIPF3-202ENST00000372422 ABCA9Q8IUA7 1624 aa22.87■■□□□ 1.25
YIPF3-202ENST00000372422 CDC42BPAQ5VT25 1732 aa22.84■■□□□ 1.25
YIPF3-202ENST00000372422 MYO5CQ9NQX4 1742 aa22.84■■□□□ 1.25
YIPF3-202ENST00000372422 PREX2Q70Z35 1606 aa22.83■■□□□ 1.24
YIPF3-202ENST00000372422 PLCH2O75038 1416 aa22.82■■□□□ 1.24
YIPF3-202ENST00000372422 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.82■■□□□ 1.24
YIPF3-202ENST00000372422 FAM50AQ14320 339 aaKnown RBP22.81■■□□□ 1.24
YIPF3-202ENST00000372422 GLI2P10070 1586 aa22.81■■□□□ 1.24
YIPF3-202ENST00000372422 PTPN23Q9H3S7 1636 aa22.81■■□□□ 1.24
YIPF3-202ENST00000372422 ARHGAP5Q13017 1502 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms