RNA–Protein interactions for RNA: ENST00000372422.6

YIPF3-202, Transcript of Yip1 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF3, Length 1,576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-202ENST00000372422 NISCHQ9Y2I1 1504 aa34.95■■■■□ 3.19
YIPF3-202ENST00000372422 CCDC180Q9P1Z9 1646 aa30.75■■■□□ 2.51
YIPF3-202ENST00000372422 ABCC9O60706 1549 aa29.42■■■□□ 2.3
YIPF3-202ENST00000372422 ZCCHC6Q5VYS8 1495 aaKnown RBP29.26■■■□□ 2.28
YIPF3-202ENST00000372422 DCAF8L2P0C7V8 631 aa28.99■■■□□ 2.23
YIPF3-202ENST00000372422 DCAF1Q9Y4B6 1507 aa28.96■■■□□ 2.23
YIPF3-202ENST00000372422 MYO15BQ96JP2 1530 aa28.83■■■□□ 2.21
YIPF3-202ENST00000372422 NACADO15069 1562 aa28.78■■■□□ 2.2
YIPF3-202ENST00000372422 RB1CC1Q8TDY2 1594 aa28.64■■■□□ 2.18
YIPF3-202ENST00000372422 SCRIBQ14160 1630 aa28.13■■■□□ 2.09
YIPF3-202ENST00000372422 SHROOM4Q9ULL8 1493 aa28.07■■■□□ 2.08
YIPF3-202ENST00000372422 UNC13AQ9UPW8 1703 aa27.9■■■□□ 2.06
YIPF3-202ENST00000372422 BICRAQ9NZM4 1560 aa27.67■■■□□ 2.02
YIPF3-202ENST00000372422 PABPN1Q86U42 306 aaKnown RBP eCLIP27.62■■■□□ 2.01
YIPF3-202ENST00000372422 CECR2Q9BXF3 1484 aa27.12■■□□□ 1.93
YIPF3-202ENST00000372422 BAZ1AQ9NRL2 1556 aaPredicted RBP27.07■■□□□ 1.92
YIPF3-202ENST00000372422 SMARCA4P51532 1647 aa26.96■■□□□ 1.91
YIPF3-202ENST00000372422 MROH2BQ7Z745 1585 aa26.93■■□□□ 1.9
YIPF3-202ENST00000372422 EIF4G1Q04637 1599 aaKnown RBP26.93■■□□□ 1.9
YIPF3-202ENST00000372422 RSF1Q96T23 1441 aaPredicted RBP26.9■■□□□ 1.9
YIPF3-202ENST00000372422 SUPT5HO00267 1087 aaKnown RBP26.81■■□□□ 1.88
YIPF3-202ENST00000372422 PEG3Q9GZU2 1588 aa26.69■■□□□ 1.86
YIPF3-202ENST00000372422 SMARCA2P51531 1590 aa26.68■■□□□ 1.86
YIPF3-202ENST00000372422 WIZO95785 1651 aa26.68■■□□□ 1.86
YIPF3-202ENST00000372422 ATAD2BQ9ULI0 1458 aa26.65■■□□□ 1.86
YIPF3-202ENST00000372422 CC2D2AQ9P2K1 1620 aa26.63■■□□□ 1.85
YIPF3-202ENST00000372422 NCAPD3P42695 1498 aa26.53■■□□□ 1.84
YIPF3-202ENST00000372422 BAZ1BQ9UIG0 1483 aaKnown RBP26.5■■□□□ 1.83
YIPF3-202ENST00000372422 HMGXB3Q12766 1538 aa26.47■■□□□ 1.83
YIPF3-202ENST00000372422 TOP2AP11388 1531 aaKnown RBP26.46■■□□□ 1.83
YIPF3-202ENST00000372422 DNAJC5BQ9UF47 199 aa26.29■■□□□ 1.8
YIPF3-202ENST00000372422 CCDC88BA6NC98 1476 aa26.14■■□□□ 1.77
YIPF3-202ENST00000372422 CADPSQ9ULU8 1353 aa25.81■■□□□ 1.72
YIPF3-202ENST00000372422 CFTRP13569 1480 aa25.79■■□□□ 1.72
YIPF3-202ENST00000372422 LAMC3Q9Y6N6 1575 aa25.73■■□□□ 1.71
YIPF3-202ENST00000372422 NESP48681 1621 aa25.64■■□□□ 1.7
YIPF3-202ENST00000372422 PRDM2Q13029 1718 aa25.63■■□□□ 1.69
YIPF3-202ENST00000372422 PDS5BQ9NTI5 1447 aa25.57■■□□□ 1.68
YIPF3-202ENST00000372422 FANCD2Q9BXW9 1451 aa25.51■■□□□ 1.67
YIPF3-202ENST00000372422 CEP164Q9UPV0 1460 aa25.43■■□□□ 1.66
YIPF3-202ENST00000372422 CHIC1Q5VXU3 224 aa25.41■■□□□ 1.66
YIPF3-202ENST00000372422 ABCC8Q09428 1581 aa25.39■■□□□ 1.66
YIPF3-202ENST00000372422 WRNQ14191 1432 aaPredicted RBP eCLIP25.38■■□□□ 1.65
YIPF3-202ENST00000372422 ERCC6Q03468 1493 aa25.36■■□□□ 1.65
YIPF3-202ENST00000372422 KIF21AQ7Z4S6 1674 aa25.35■■□□□ 1.65
YIPF3-202ENST00000372422 TRIM41Q8WV44 630 aa25.31■■□□□ 1.64
YIPF3-202ENST00000372422 MRC2Q9UBG0 1479 aa25.23■■□□□ 1.63
YIPF3-202ENST00000372422 SYNJ1O43426 1573 aa25.23■■□□□ 1.63
YIPF3-202ENST00000372422 CUX1P39880 1505 aa25.22■■□□□ 1.63
YIPF3-202ENST00000372422 TOP2BQ02880 1626 aa25.22■■□□□ 1.63
YIPF3-202ENST00000372422 DNMBPQ6XZF7 1577 aa25.21■■□□□ 1.63
YIPF3-202ENST00000372422 BIVM-ERCC5R4GMW8 1640 aa25.19■■□□□ 1.62
YIPF3-202ENST00000372422 URB2Q14146 1524 aaKnown RBP25.18■■□□□ 1.62
YIPF3-202ENST00000372422 TOPBP1Q92547 1522 aa25.17■■□□□ 1.62
YIPF3-202ENST00000372422 WDR62O43379 1518 aa25.1■■□□□ 1.61
YIPF3-202ENST00000372422 THOC2Q8NI27 1593 aaKnown RBP25.09■■□□□ 1.61
YIPF3-202ENST00000372422 FGD5Q6ZNL6 1462 aa25.05■■□□□ 1.6
YIPF3-202ENST00000372422 POLA1P09884 1462 aaPredicted RBP25■■□□□ 1.59
YIPF3-202ENST00000372422 SOGA1O94964 1423 aa24.94■■□□□ 1.58
YIPF3-202ENST00000372422 RAD54L2Q9Y4B4 1467 aa24.88■■□□□ 1.57
YIPF3-202ENST00000372422 IFT140Q96RY7 1462 aa24.87■■□□□ 1.57
YIPF3-202ENST00000372422 CUX2O14529 1486 aa24.86■■□□□ 1.57
YIPF3-202ENST00000372422 ABCA10Q8WWZ4 1543 aa24.85■■□□□ 1.57
YIPF3-202ENST00000372422 EEA1Q15075 1411 aa24.83■■□□□ 1.57
YIPF3-202ENST00000372422 KIF27Q86VH2 1401 aa24.81■■□□□ 1.56
YIPF3-202ENST00000372422 TARBP1Q13395 1621 aaKnown RBP24.81■■□□□ 1.56
YIPF3-202ENST00000372422 WDR97A6NE52 1622 aa24.77■■□□□ 1.56
YIPF3-202ENST00000372422 FAM9AQ8IZU1 332 aaPredicted RBP24.75■■□□□ 1.55
YIPF3-202ENST00000372422 RUSC2Q8N2Y8 1516 aa24.72■■□□□ 1.55
YIPF3-202ENST00000372422 TDRD9Q8NDG6 1382 aaKnown RBP24.7■■□□□ 1.54
YIPF3-202ENST00000372422 CSRNP3Q8WYN3 585 aa24.67■■□□□ 1.54
YIPF3-202ENST00000372422 ABCA5Q8WWZ7 1642 aa24.66■■□□□ 1.54
YIPF3-202ENST00000372422 GAPVD1Q14C86 1478 aa24.66■■□□□ 1.54
YIPF3-202ENST00000372422 ZNF608Q9ULD9 1512 aaPredicted RBP24.64■■□□□ 1.54
YIPF3-202ENST00000372422 AQRO60306 1485 aaKnown RBP eCLIP24.61■■□□□ 1.532e-8■■■□□ 18.4
YIPF3-202ENST00000372422 EIF4G3O43432 1585 aaKnown RBP24.59■■□□□ 1.53
YIPF3-202ENST00000372422 IGF1RP08069 1367 aa24.58■■□□□ 1.52
YIPF3-202ENST00000372422 ERICH3Q5RHP9 1530 aa24.58■■□□□ 1.52
YIPF3-202ENST00000372422 GRIN2BQ13224 1484 aa24.57■■□□□ 1.52
YIPF3-202ENST00000372422 PBRM1Q86U86 1689 aa24.52■■□□□ 1.52
YIPF3-202ENST00000372422 CUL7Q14999 1698 aa24.49■■□□□ 1.51
YIPF3-202ENST00000372422 CARMIL1Q5VZK9 1371 aa24.47■■□□□ 1.51
YIPF3-202ENST00000372422 PRXQ9BXM0 1461 aa24.47■■□□□ 1.51
YIPF3-202ENST00000372422 KIF21BO75037 1637 aa24.47■■□□□ 1.51
YIPF3-202ENST00000372422 MAGI1Q96QZ7 1491 aaPredicted RBP24.43■■□□□ 1.5
YIPF3-202ENST00000372422 SNAPC4Q5SXM2 1469 aa24.42■■□□□ 1.5
YIPF3-202ENST00000372422 GOLGA3Q08378 1498 aa24.41■■□□□ 1.5
YIPF3-202ENST00000372422 RAPGEF2Q9Y4G8 1499 aa24.41■■□□□ 1.5
YIPF3-202ENST00000372422 FHAD1B1AJZ9 1412 aa24.41■■□□□ 1.5
YIPF3-202ENST00000372422 ADAMTS12P58397 1594 aa24.39■■□□□ 1.5
YIPF3-202ENST00000372422 EHMT2Q96KQ7 1210 aa24.37■■□□□ 1.49
YIPF3-202ENST00000372422 LOC105371045A0A1W2PR82 267 aa24.36■■□□□ 1.49
YIPF3-202ENST00000372422 UBTFP17480 764 aaKnown RBP24.32■■□□□ 1.48
YIPF3-202ENST00000372422 SYNJ2O15056 1496 aa24.32■■□□□ 1.48
YIPF3-202ENST00000372422 CHMP7Q8WUX9 453 aaPredicted RBP24.29■■□□□ 1.48
YIPF3-202ENST00000372422 FBLN2P98095 1184 aa24.25■■□□□ 1.47
YIPF3-202ENST00000372422 GRIN2AQ12879 1464 aa24.24■■□□□ 1.47
YIPF3-202ENST00000372422 TNIKQ9UKE5 1360 aa24.23■■□□□ 1.47
YIPF3-202ENST00000372422 CHD1O14646 1710 aa24.13■■□□□ 1.45
YIPF3-202ENST00000372422 CTTNBP2Q8WZ74 1663 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms