RNA–Protein interactions for RNA: ENST00000372397.6

TSC22D3-206, Transcript of TSC22 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC22D3, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-206ENST00000372397 MAP3K1Q13233 1512 aa19.1■□□□□ 0.65
TSC22D3-206ENST00000372397 FHAD1B1AJZ9 1412 aa19.09■□□□□ 0.65
TSC22D3-206ENST00000372397 RRBP1Q9P2E9 1410 aaKnown RBP19.08■□□□□ 0.65
TSC22D3-206ENST00000372397 EFCAB5A4FU69 1503 aa19.08■□□□□ 0.64
TSC22D3-206ENST00000372397 MRC2Q9UBG0 1479 aa19.07■□□□□ 0.64
TSC22D3-206ENST00000372397 FHOD3Q2V2M9 1422 aa19.07■□□□□ 0.64
TSC22D3-206ENST00000372397 PCF11O94913 1555 aaKnown RBP19.05■□□□□ 0.64
TSC22D3-206ENST00000372397 LRRC9Q6ZRR7 1453 aa19.02■□□□□ 0.64
TSC22D3-206ENST00000372397 ATP1B4Q9UN42 357 aaPredicted RBP19.02■□□□□ 0.64
TSC22D3-206ENST00000372397 CCNB3Q8WWL7 1395 aa19.02■□□□□ 0.63
TSC22D3-206ENST00000372397 PBRM1Q86U86 1689 aa19■□□□□ 0.63
TSC22D3-206ENST00000372397 CFAP43Q8NDM7 1665 aa19■□□□□ 0.63
TSC22D3-206ENST00000372397 AQRO60306 1485 aaKnown RBP eCLIP18.99■□□□□ 0.63
TSC22D3-206ENST00000372397 FYCO1Q9BQS8 1478 aa18.98■□□□□ 0.63
TSC22D3-206ENST00000372397 CASKIN1Q8WXD9 1431 aa18.97■□□□□ 0.63
TSC22D3-206ENST00000372397 SAMD9Q5K651 1589 aa18.95■□□□□ 0.62
TSC22D3-206ENST00000372397 FMN1Q68DA7 1419 aa18.95■□□□□ 0.62
TSC22D3-206ENST00000372397 WDR62O43379 1518 aa18.94■□□□□ 0.62
TSC22D3-206ENST00000372397 ITGAEP38570 1179 aa18.93■□□□□ 0.62
TSC22D3-206ENST00000372397 PHLDB1Q86UU1 1377 aa18.92■□□□□ 0.62
TSC22D3-206ENST00000372397 IFT140Q96RY7 1462 aa18.91■□□□□ 0.62
TSC22D3-206ENST00000372397 GRIN2BQ13224 1484 aa18.9■□□□□ 0.62
TSC22D3-206ENST00000372397 ADAMTS12P58397 1594 aa18.9■□□□□ 0.62
TSC22D3-206ENST00000372397 ZNF608Q9ULD9 1512 aaPredicted RBP18.89■□□□□ 0.61
TSC22D3-206ENST00000372397 SNAPC4Q5SXM2 1469 aa18.89■□□□□ 0.61
TSC22D3-206ENST00000372397 DHX57Q6P158 1386 aaKnown RBP18.89■□□□□ 0.61
TSC22D3-206ENST00000372397 ERCC6Q03468 1493 aa18.86■□□□□ 0.61
TSC22D3-206ENST00000372397 PELP1Q8IZL8 1130 aaKnown RBP18.84■□□□□ 0.61
TSC22D3-206ENST00000372397 CLSPNQ9HAW4 1339 aa18.84■□□□□ 0.61
TSC22D3-206ENST00000372397 LRRIQ1Q96JM4 1722 aa18.83■□□□□ 0.6
TSC22D3-206ENST00000372397 FAM50AQ14320 339 aaKnown RBP18.83■□□□□ 0.6
TSC22D3-206ENST00000372397 ZNF316A6NFI3 1004 aaPredicted RBP18.82■□□□□ 0.6
TSC22D3-206ENST00000372397 IQGAP2Q13576 1575 aa18.82■□□□□ 0.6
TSC22D3-206ENST00000372397 DIEXFQ68CQ4 756 aaKnown RBP18.81■□□□□ 0.6
TSC22D3-206ENST00000372397 THOC2Q8NI27 1593 aaKnown RBP18.78■□□□□ 0.6
TSC22D3-206ENST00000372397 MTUS2Q5JR59 1369 aa18.78■□□□□ 0.6
TSC22D3-206ENST00000372397 EIF4G3O43432 1585 aaKnown RBP18.77■□□□□ 0.6
TSC22D3-206ENST00000372397 RAB3GAP2Q9H2M9 1393 aa18.77■□□□□ 0.6
TSC22D3-206ENST00000372397 SETD5Q9C0A6 1442 aa18.74■□□□□ 0.59
TSC22D3-206ENST00000372397 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.72■□□□□ 0.59
TSC22D3-206ENST00000372397 UGGT2Q9NYU1 1516 aa18.71■□□□□ 0.59
TSC22D3-206ENST00000372397 FGD6Q6ZV73 1430 aa18.71■□□□□ 0.59
TSC22D3-206ENST00000372397 GRIN2AQ12879 1464 aa18.7■□□□□ 0.58
TSC22D3-206ENST00000372397 KIAA0586Q9BVV6 1533 aa18.69■□□□□ 0.58
TSC22D3-206ENST00000372397 NCOA2Q15596 1464 aa18.68■□□□□ 0.58
TSC22D3-206ENST00000372397 SUPT6HQ7KZ85 1726 aaKnown RBP18.68■□□□□ 0.58
TSC22D3-206ENST00000372397 CCDC18Q5T9S5 1454 aa18.68■□□□□ 0.58
TSC22D3-206ENST00000372397 HECW1Q76N89 1606 aa18.68■□□□□ 0.58
TSC22D3-206ENST00000372397 EHBP1L1Q8N3D4 1523 aa18.68■□□□□ 0.58
TSC22D3-206ENST00000372397 MAGI1Q96QZ7 1491 aaPredicted RBP18.66■□□□□ 0.58
TSC22D3-206ENST00000372397 MAGI3Q5TCQ9 1506 aa18.66■□□□□ 0.58
TSC22D3-206ENST00000372397 MYOM3Q5VTT5 1437 aa18.64■□□□□ 0.57
TSC22D3-206ENST00000372397 EPRSP07814 1512 aaKnown RBP18.64■□□□□ 0.57
TSC22D3-206ENST00000372397 CHMP7Q8WUX9 453 aaPredicted RBP18.64■□□□□ 0.57
TSC22D3-206ENST00000372397 DISP1Q96F81 1524 aa18.63■□□□□ 0.57
TSC22D3-206ENST00000372397 KIAA0556O60303 1618 aa18.62■□□□□ 0.57
TSC22D3-206ENST00000372397 MAPKBP1O60336 1514 aa18.62■□□□□ 0.57
TSC22D3-206ENST00000372397 SYNJ2O15056 1496 aa18.61■□□□□ 0.57
TSC22D3-206ENST00000372397 CDK13Q14004 1512 aaKnown RBP18.6■□□□□ 0.57
TSC22D3-206ENST00000372397 ARHGEF11O15085 1522 aa18.6■□□□□ 0.57
TSC22D3-206ENST00000372397 ARID3CA6NKF2 412 aa18.59■□□□□ 0.57
TSC22D3-206ENST00000372397 FBLN2P98095 1184 aa18.59■□□□□ 0.57
TSC22D3-206ENST00000372397 CEP170Q5SW79 1584 aa18.58■□□□□ 0.57
TSC22D3-206ENST00000372397 PTPRKQ15262 1439 aa18.57■□□□□ 0.56
TSC22D3-206ENST00000372397 PTPN23Q9H3S7 1636 aa18.57■□□□□ 0.56
TSC22D3-206ENST00000372397 SCAF1Q9H7N4 1312 aaKnown RBP18.53■□□□□ 0.56
TSC22D3-206ENST00000372397 RAPGEF6Q8TEU7 1601 aa18.52■□□□□ 0.56
TSC22D3-206ENST00000372397 HFM1A2PYH4 1435 aa18.51■□□□□ 0.55
TSC22D3-206ENST00000372397 NUP153P49790 1475 aaKnown RBP18.5■□□□□ 0.55
TSC22D3-206ENST00000372397 NUP160Q12769 1436 aa18.5■□□□□ 0.55
TSC22D3-206ENST00000372397 TCOF1Q13428 1488 aaKnown RBP18.49■□□□□ 0.55
TSC22D3-206ENST00000372397 SIN3AQ96ST3 1273 aa18.49■□□□□ 0.55
TSC22D3-206ENST00000372397 JPH4Q96JJ6 628 aa18.49■□□□□ 0.55
TSC22D3-206ENST00000372397 NEUROD1Q13562 356 aa18.47■□□□□ 0.55
TSC22D3-206ENST00000372397 NAIPQ13075 1403 aa18.47■□□□□ 0.55
TSC22D3-206ENST00000372397 MIER1Q8N108 512 aa18.46■□□□□ 0.55
TSC22D3-206ENST00000372397 MIA2Q96PC5 1412 aa18.46■□□□□ 0.54
TSC22D3-206ENST00000372397 CARMIL2Q6F5E8 1435 aa18.45■□□□□ 0.54
TSC22D3-206ENST00000372397 CDK11AQ9UQ88 783 aaPredicted RBP18.44■□□□□ 0.54
TSC22D3-206ENST00000372397 CHIC2Q9UKJ5 165 aa18.43■□□□□ 0.54
TSC22D3-206ENST00000372397 PLB1Q6P1J6 1458 aa18.43■□□□□ 0.54
TSC22D3-206ENST00000372397 UACAQ9BZF9 1416 aa18.42■□□□□ 0.54
TSC22D3-206ENST00000372397 RRP7BPQ9NSQ0 103 aa18.41■□□□□ 0.54
TSC22D3-206ENST00000372397 TIMELESSQ9UNS1 1208 aa18.39■□□□□ 0.53
TSC22D3-206ENST00000372397 PRG4Q92954 1404 aaPredicted RBP18.37■□□□□ 0.53
TSC22D3-206ENST00000372397 GCC2Q8IWJ2 1684 aa18.37■□□□□ 0.53
TSC22D3-206ENST00000372397 ACIN1Q9UKV3 1341 aaKnown RBP18.36■□□□□ 0.53
TSC22D3-206ENST00000372397 TROQ12816 1431 aaPredicted RBP18.36■□□□□ 0.53
TSC22D3-206ENST00000372397 CENPBP07199 599 aaPredicted RBP18.35■□□□□ 0.53
TSC22D3-206ENST00000372397 AKNAQ7Z591 1439 aa18.34■□□□□ 0.53
TSC22D3-206ENST00000372397 ZNF644Q9H582 1327 aaPredicted RBP18.33■□□□□ 0.53
TSC22D3-206ENST00000372397 KDM6BO15054 1643 aa18.32■□□□□ 0.52
TSC22D3-206ENST00000372397 ABCA8O94911 1581 aa18.31■□□□□ 0.52
TSC22D3-206ENST00000372397 PPP1R15AO75807 674 aaPredicted RBP18.31■□□□□ 0.52
TSC22D3-206ENST00000372397 DAPK1P53355 1430 aa18.31■□□□□ 0.52
TSC22D3-206ENST00000372397 CHD1O14646 1710 aa18.3■□□□□ 0.52
TSC22D3-206ENST00000372397 DNMT1P26358 1616 aaKnown RBP18.3■□□□□ 0.52
TSC22D3-206ENST00000372397 KIF14Q15058 1648 aa18.29■□□□□ 0.52
TSC22D3-206ENST00000372397 ABCC5O15440 1437 aa18.29■□□□□ 0.52
TSC22D3-206ENST00000372397 TRIM52Q96A61 297 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms