RNA–Protein interactions for RNA: ENST00000372397.6

TSC22D3-206, Transcript of TSC22 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC22D3, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-206ENST00000372397 NISCHQ9Y2I1 1504 aa27.51■■□□□ 1.99
TSC22D3-206ENST00000372397 CCDC180Q9P1Z9 1646 aa23.65■■□□□ 1.38
TSC22D3-206ENST00000372397 ZCCHC6Q5VYS8 1495 aaKnown RBP23.18■■□□□ 1.3
TSC22D3-206ENST00000372397 SHROOM4Q9ULL8 1493 aa23.01■■□□□ 1.27
TSC22D3-206ENST00000372397 DCAF8L2P0C7V8 631 aa22.79■■□□□ 1.24
TSC22D3-206ENST00000372397 DCAF1Q9Y4B6 1507 aa22.64■■□□□ 1.21
TSC22D3-206ENST00000372397 SUPT5HO00267 1087 aaKnown RBP22.4■■□□□ 1.18
TSC22D3-206ENST00000372397 MYO15BQ96JP2 1530 aa22.15■■□□□ 1.14
TSC22D3-206ENST00000372397 ABCC9O60706 1549 aa22.11■■□□□ 1.13
TSC22D3-206ENST00000372397 SCRIBQ14160 1630 aa21.99■■□□□ 1.11
TSC22D3-206ENST00000372397 NACADO15069 1562 aa21.94■■□□□ 1.1
TSC22D3-206ENST00000372397 RB1CC1Q8TDY2 1594 aa21.65■■□□□ 1.06
TSC22D3-206ENST00000372397 CHIC1Q5VXU3 224 aa21.63■■□□□ 1.05
TSC22D3-206ENST00000372397 RSF1Q96T23 1441 aaPredicted RBP21.58■■□□□ 1.04
TSC22D3-206ENST00000372397 CECR2Q9BXF3 1484 aa21.43■■□□□ 1.02
TSC22D3-206ENST00000372397 MROH2BQ7Z745 1585 aa21.33■■□□□ 1.01
TSC22D3-206ENST00000372397 UNC13AQ9UPW8 1703 aa21.32■■□□□ 1
TSC22D3-206ENST00000372397 WIZO95785 1651 aa21.2■□□□□ 0.98
TSC22D3-206ENST00000372397 BAZ1AQ9NRL2 1556 aaPredicted RBP21.17■□□□□ 0.98
TSC22D3-206ENST00000372397 BICRAQ9NZM4 1560 aa21.05■□□□□ 0.96
TSC22D3-206ENST00000372397 SMARCA4P51532 1647 aa21.04■□□□□ 0.96
TSC22D3-206ENST00000372397 PABPN1Q86U42 306 aaKnown RBP eCLIP21.03■□□□□ 0.96
TSC22D3-206ENST00000372397 TRIM41Q8WV44 630 aa20.94■□□□□ 0.94
TSC22D3-206ENST00000372397 LOC105371045A0A1W2PR82 267 aa20.93■□□□□ 0.94
TSC22D3-206ENST00000372397 TOP2AP11388 1531 aaKnown RBP20.9■□□□□ 0.94
TSC22D3-206ENST00000372397 CCDC88BA6NC98 1476 aa20.77■□□□□ 0.92
TSC22D3-206ENST00000372397 SMARCA2P51531 1590 aa20.76■□□□□ 0.91
TSC22D3-206ENST00000372397 EIF4G1Q04637 1599 aaKnown RBP20.76■□□□□ 0.91
TSC22D3-206ENST00000372397 PEG3Q9GZU2 1588 aa20.69■□□□□ 0.9
TSC22D3-206ENST00000372397 FAM9AQ8IZU1 332 aaPredicted RBP20.68■□□□□ 0.9
TSC22D3-206ENST00000372397 ATAD2BQ9ULI0 1458 aa20.58■□□□□ 0.88
TSC22D3-206ENST00000372397 ABCC8Q09428 1581 aa20.55■□□□□ 0.88
TSC22D3-206ENST00000372397 BAZ1BQ9UIG0 1483 aaKnown RBP20.5■□□□□ 0.87
TSC22D3-206ENST00000372397 PCGF6Q9BYE7 350 aa20.49■□□□□ 0.87
TSC22D3-206ENST00000372397 EHMT2Q96KQ7 1210 aa20.46■□□□□ 0.87
TSC22D3-206ENST00000372397 WRNQ14191 1432 aaPredicted RBP eCLIP20.28■□□□□ 0.84
TSC22D3-206ENST00000372397 NCAPD3P42695 1498 aa20.28■□□□□ 0.84
TSC22D3-206ENST00000372397 SOGA1O94964 1423 aa20.27■□□□□ 0.84
TSC22D3-206ENST00000372397 TRIM26Q12899 539 aaPredicted RBP20.27■□□□□ 0.84
TSC22D3-206ENST00000372397 HMGXB3Q12766 1538 aa20.25■□□□□ 0.83
TSC22D3-206ENST00000372397 HRCP23327 699 aa20.25■□□□□ 0.83
TSC22D3-206ENST00000372397 SYNJ1O43426 1573 aa20.2■□□□□ 0.82
TSC22D3-206ENST00000372397 RUSC2Q8N2Y8 1516 aa20.19■□□□□ 0.82
TSC22D3-206ENST00000372397 EEA1Q15075 1411 aa20.18■□□□□ 0.82
TSC22D3-206ENST00000372397 CSRNP3Q8WYN3 585 aa20.15■□□□□ 0.82
TSC22D3-206ENST00000372397 TNIKQ9UKE5 1360 aa20.03■□□□□ 0.8
TSC22D3-206ENST00000372397 TOP2BQ02880 1626 aa20.02■□□□□ 0.8
TSC22D3-206ENST00000372397 CEP162Q5TB80 1403 aa20■□□□□ 0.79
TSC22D3-206ENST00000372397 UBTFP17480 764 aaKnown RBP20■□□□□ 0.79
TSC22D3-206ENST00000372397 CFTRP13569 1480 aa19.99■□□□□ 0.79
TSC22D3-206ENST00000372397 GOLGA3Q08378 1498 aa19.99■□□□□ 0.79
TSC22D3-206ENST00000372397 BIVM-ERCC5R4GMW8 1640 aa19.98■□□□□ 0.79
TSC22D3-206ENST00000372397 PPARGC1BQ86YN6 1023 aaKnown RBP19.97■□□□□ 0.79
TSC22D3-206ENST00000372397 CC2D2AQ9P2K1 1620 aa19.96■□□□□ 0.79
TSC22D3-206ENST00000372397 CEP164Q9UPV0 1460 aa19.93■□□□□ 0.78
TSC22D3-206ENST00000372397 KIF21BO75037 1637 aa19.92■□□□□ 0.78
TSC22D3-206ENST00000372397 CUX1P39880 1505 aa19.89■□□□□ 0.78
TSC22D3-206ENST00000372397 PRDM2Q13029 1718 aa19.88■□□□□ 0.77
TSC22D3-206ENST00000372397 CADPSQ9ULU8 1353 aa19.83■□□□□ 0.77
TSC22D3-206ENST00000372397 RAPGEF2Q9Y4G8 1499 aa19.81■□□□□ 0.76
TSC22D3-206ENST00000372397 CLIP1P30622 1438 aa19.72■□□□□ 0.75
TSC22D3-206ENST00000372397 KIF27Q86VH2 1401 aa19.71■□□□□ 0.75
TSC22D3-206ENST00000372397 TTBK1Q5TCY1 1321 aaPredicted RBP19.7■□□□□ 0.74
TSC22D3-206ENST00000372397 PRXQ9BXM0 1461 aa19.7■□□□□ 0.74
TSC22D3-206ENST00000372397 ERICH3Q5RHP9 1530 aa19.68■□□□□ 0.74
TSC22D3-206ENST00000372397 ZEB1P37275 1124 aaPredicted RBP19.66■□□□□ 0.74
TSC22D3-206ENST00000372397 RANGAP1P46060 587 aaPredicted RBP19.63■□□□□ 0.73
TSC22D3-206ENST00000372397 FANCD2Q9BXW9 1451 aa19.63■□□□□ 0.73
TSC22D3-206ENST00000372397 VPS8Q8N3P4 1428 aa19.59■□□□□ 0.73
TSC22D3-206ENST00000372397 FGD5Q6ZNL6 1462 aa19.59■□□□□ 0.73
TSC22D3-206ENST00000372397 NESP48681 1621 aa19.58■□□□□ 0.73
TSC22D3-206ENST00000372397 CUX2O14529 1486 aa19.58■□□□□ 0.73
TSC22D3-206ENST00000372397 IGF1RP08069 1367 aa19.52■□□□□ 0.72
TSC22D3-206ENST00000372397 DNMBPQ6XZF7 1577 aa19.5■□□□□ 0.71
TSC22D3-206ENST00000372397 LAMC3Q9Y6N6 1575 aa19.49■□□□□ 0.71
TSC22D3-206ENST00000372397 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.49■□□□□ 0.71
TSC22D3-206ENST00000372397 APLP2Q06481 763 aa19.48■□□□□ 0.71
TSC22D3-206ENST00000372397 DNAJC5BQ9UF47 199 aa19.47■□□□□ 0.71
TSC22D3-206ENST00000372397 TOPBP1Q92547 1522 aa19.47■□□□□ 0.71
TSC22D3-206ENST00000372397 ARAP1Q96P48 1450 aa19.46■□□□□ 0.71
TSC22D3-206ENST00000372397 CCER1Q8TC90 406 aaPredicted RBP19.43■□□□□ 0.7
TSC22D3-206ENST00000372397 CARMIL1Q5VZK9 1371 aa19.43■□□□□ 0.7
TSC22D3-206ENST00000372397 RAD54L2Q9Y4B4 1467 aa19.42■□□□□ 0.7
TSC22D3-206ENST00000372397 POLA1P09884 1462 aaPredicted RBP19.42■□□□□ 0.7
TSC22D3-206ENST00000372397 ABCA10Q8WWZ4 1543 aa19.39■□□□□ 0.69
TSC22D3-206ENST00000372397 URB2Q14146 1524 aaKnown RBP19.37■□□□□ 0.69
TSC22D3-206ENST00000372397 ARHGAP35Q9NRY4 1499 aa19.36■□□□□ 0.69
TSC22D3-206ENST00000372397 PDS5BQ9NTI5 1447 aa19.36■□□□□ 0.69
TSC22D3-206ENST00000372397 KIF21AQ7Z4S6 1674 aa19.3■□□□□ 0.68
TSC22D3-206ENST00000372397 HNRNPUL2Q1KMD3 747 aaKnown RBP19.29■□□□□ 0.68
TSC22D3-206ENST00000372397 WDR97A6NE52 1622 aa19.27■□□□□ 0.67
TSC22D3-206ENST00000372397 KANK4Q5T7N3 995 aaPredicted RBP19.27■□□□□ 0.67
TSC22D3-206ENST00000372397 CUL7Q14999 1698 aa19.24■□□□□ 0.67
TSC22D3-206ENST00000372397 TDRD9Q8NDG6 1382 aaKnown RBP19.21■□□□□ 0.67
TSC22D3-206ENST00000372397 ABCA5Q8WWZ7 1642 aa19.19■□□□□ 0.66
TSC22D3-206ENST00000372397 GAPVD1Q14C86 1478 aa19.16■□□□□ 0.66
TSC22D3-206ENST00000372397 P3H3Q8IVL6 736 aa19.14■□□□□ 0.65
TSC22D3-206ENST00000372397 CTTNBP2Q8WZ74 1663 aa19.14■□□□□ 0.65
TSC22D3-206ENST00000372397 TARBP1Q13395 1621 aaKnown RBP19.12■□□□□ 0.65
TSC22D3-206ENST00000372397 TIAM1Q13009 1591 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms