RNA–Protein interactions for RNA: ENST00000371509.8

SCP2-201, Transcript of sterol carrier protein 2, humanhuman

TSL 1 (best) BASIC

Gene SCP2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-201ENST00000371509 NUP160Q12769 1436 aa26.55■■□□□ 1.84
SCP2-201ENST00000371509 TNIKQ9UKE5 1360 aa26.52■■□□□ 1.84
SCP2-201ENST00000371509 RANGAP1P46060 587 aaPredicted RBP26.51■■□□□ 1.83
SCP2-201ENST00000371509 KIAA0586Q9BVV6 1533 aa26.46■■□□□ 1.83
SCP2-201ENST00000371509 IQGAP2Q13576 1575 aa26.45■■□□□ 1.82
SCP2-201ENST00000371509 OSCARQ8IYS5 282 aa26.43■■□□□ 1.82
SCP2-201ENST00000371509 CLASP1Q7Z460 1538 aa26.4■■□□□ 1.82
SCP2-201ENST00000371509 CEP162Q5TB80 1403 aa26.37■■□□□ 1.81
SCP2-201ENST00000371509 JPH4Q96JJ6 628 aa26.33■■□□□ 1.81
SCP2-201ENST00000371509 CLIP1P30622 1438 aa26.3■■□□□ 1.8
SCP2-201ENST00000371509 UGGT2Q9NYU1 1516 aa26.29■■□□□ 1.8
SCP2-201ENST00000371509 SHROOM2Q13796 1616 aa26.28■■□□□ 1.8
SCP2-201ENST00000371509 P3H3Q8IVL6 736 aa26.28■■□□□ 1.8
SCP2-201ENST00000371509 ARHGAP35Q9NRY4 1499 aa26.25■■□□□ 1.79
SCP2-201ENST00000371509 SAMD9Q5K651 1589 aa26.24■■□□□ 1.79
SCP2-201ENST00000371509 DISP1Q96F81 1524 aa26.23■■□□□ 1.79
SCP2-201ENST00000371509 PRG4Q92954 1404 aaPredicted RBP26.22■■□□□ 1.79
SCP2-201ENST00000371509 ERCC6L2Q5T890 1561 aa26.21■■□□□ 1.79
SCP2-201ENST00000371509 EFCAB5A4FU69 1503 aa26.2■■□□□ 1.79
SCP2-201ENST00000371509 KIAA0556O60303 1618 aa26.2■■□□□ 1.78
SCP2-201ENST00000371509 FHOD3Q2V2M9 1422 aa26.17■■□□□ 1.78
SCP2-201ENST00000371509 ARAP1Q96P48 1450 aa26.16■■□□□ 1.78
SCP2-201ENST00000371509 CARMIL2Q6F5E8 1435 aa26.14■■□□□ 1.78
SCP2-201ENST00000371509 TTBK1Q5TCY1 1321 aaPredicted RBP26.14■■□□□ 1.78
SCP2-201ENST00000371509 ARHGEF11O15085 1522 aa26.03■■□□□ 1.76
SCP2-201ENST00000371509 PCGF6Q9BYE7 350 aa26■■□□□ 1.75
SCP2-201ENST00000371509 RIMBP3CA6NJZ7 1639 aa25.98■■□□□ 1.75
SCP2-201ENST00000371509 RIMBP3BA6NNM3 1639 aa25.98■■□□□ 1.75
SCP2-201ENST00000371509 RIMBP3Q9UFD9 1639 aa25.98■■□□□ 1.75
SCP2-201ENST00000371509 PTPRGP23470 1445 aa25.98■■□□□ 1.75
SCP2-201ENST00000371509 VPS8Q8N3P4 1428 aa25.97■■□□□ 1.75
SCP2-201ENST00000371509 FMN1Q68DA7 1419 aa25.96■■□□□ 1.75
SCP2-201ENST00000371509 TRIM26Q12899 539 aaPredicted RBP25.94■■□□□ 1.74
SCP2-201ENST00000371509 PCF11O94913 1555 aaKnown RBP25.92■■□□□ 1.74
SCP2-201ENST00000371509 PLB1Q6P1J6 1458 aa25.92■■□□□ 1.74
SCP2-201ENST00000371509 ATP1B4Q9UN42 357 aaPredicted RBP25.89■■□□□ 1.74
SCP2-201ENST00000371509 RAPGEF6Q8TEU7 1601 aa25.87■■□□□ 1.73
SCP2-201ENST00000371509 ABCA8O94911 1581 aa25.85■■□□□ 1.73
SCP2-201ENST00000371509 CASKIN1Q8WXD9 1431 aa25.85■■□□□ 1.73
SCP2-201ENST00000371509 ARID3CA6NKF2 412 aa25.83■■□□□ 1.72
SCP2-201ENST00000371509 UACAQ9BZF9 1416 aa25.82■■□□□ 1.72
SCP2-201ENST00000371509 FYCO1Q9BQS8 1478 aa25.82■■□□□ 1.72
SCP2-201ENST00000371509 LRRIQ1Q96JM4 1722 aa25.81■■□□□ 1.72
SCP2-201ENST00000371509 CYB5RLQ6IPT4 315 aa25.81■■□□□ 1.72
SCP2-201ENST00000371509 DNAJC5Q9H3Z4 198 aa25.79■■□□□ 1.72
SCP2-201ENST00000371509 HECW1Q76N89 1606 aa25.79■■□□□ 1.72
SCP2-201ENST00000371509 NUP153P49790 1475 aaKnown RBP25.78■■□□□ 1.72
SCP2-201ENST00000371509 ABCC2Q92887 1545 aa25.76■■□□□ 1.71
SCP2-201ENST00000371509 ADCY10Q96PN6 1610 aa25.76■■□□□ 1.71
SCP2-201ENST00000371509 CDK13Q14004 1512 aaKnown RBP25.72■■□□□ 1.71
SCP2-201ENST00000371509 EPRSP07814 1512 aaKnown RBP25.71■■□□□ 1.71
SCP2-201ENST00000371509 UHRF1BP1LA0JNW5 1464 aa25.7■■□□□ 1.71
SCP2-201ENST00000371509 APLP2Q06481 763 aa25.68■■□□□ 1.7
SCP2-201ENST00000371509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.68■■□□□ 1.7
SCP2-201ENST00000371509 HNRNPUL2Q1KMD3 747 aaKnown RBP25.68■■□□□ 1.7
SCP2-201ENST00000371509 PPARGC1BQ86YN6 1023 aaKnown RBP25.67■■□□□ 1.7
SCP2-201ENST00000371509 ATP10BO94823 1461 aa25.67■■□□□ 1.7
SCP2-201ENST00000371509 TIAM1Q13009 1591 aa25.66■■□□□ 1.7
SCP2-201ENST00000371509 CFAP43Q8NDM7 1665 aa25.65■■□□□ 1.7
SCP2-201ENST00000371509 CCDC18Q5T9S5 1454 aa25.65■■□□□ 1.7
SCP2-201ENST00000371509 ZCCHC11Q5TAX3 1644 aaKnown RBP25.64■■□□□ 1.69
SCP2-201ENST00000371509 KDM5BQ9UGL1 1544 aa25.62■■□□□ 1.69
SCP2-201ENST00000371509 KANK4Q5T7N3 995 aaPredicted RBP25.6■■□□□ 1.69
SCP2-201ENST00000371509 MAP3K1Q13233 1512 aa25.59■■□□□ 1.69
SCP2-201ENST00000371509 HRCP23327 699 aa25.57■■□□□ 1.68
SCP2-201ENST00000371509 MAGI3Q5TCQ9 1506 aa25.57■■□□□ 1.68
SCP2-201ENST00000371509 NPM1P06748 294 aaKnown RBP eCLIP25.55■■□□□ 1.68
SCP2-201ENST00000371509 LRRC9Q6ZRR7 1453 aa25.53■■□□□ 1.68
SCP2-201ENST00000371509 MTUS2Q5JR59 1369 aa25.51■■□□□ 1.67
SCP2-201ENST00000371509 CDK11AQ9UQ88 783 aaPredicted RBP25.49■■□□□ 1.67
SCP2-201ENST00000371509 PLEKHD1A6NEE1 506 aa25.49■■□□□ 1.67
SCP2-201ENST00000371509 EHBP1L1Q8N3D4 1523 aa25.46■■□□□ 1.67
SCP2-201ENST00000371509 TROQ12816 1431 aaPredicted RBP25.44■■□□□ 1.66
SCP2-201ENST00000371509 ASXL2Q76L83 1435 aa25.44■■□□□ 1.66
SCP2-201ENST00000371509 KIF14Q15058 1648 aa25.41■■□□□ 1.66
SCP2-201ENST00000371509 KCNH8Q96L42 1107 aa25.4■■□□□ 1.66
SCP2-201ENST00000371509 WDR7Q9Y4E6 1490 aa25.4■■□□□ 1.66
SCP2-201ENST00000371509 MAPKBP1O60336 1514 aa25.39■■□□□ 1.66
SCP2-201ENST00000371509 SUPT6HQ7KZ85 1726 aaKnown RBP25.39■■□□□ 1.65
SCP2-201ENST00000371509 NCOA2Q15596 1464 aa25.35■■□□□ 1.65
SCP2-201ENST00000371509 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.29■■□□□ 1.64
SCP2-201ENST00000371509 PHLDB1Q86UU1 1377 aa25.28■■□□□ 1.64
SCP2-201ENST00000371509 TTC37Q6PGP7 1564 aa25.28■■□□□ 1.64
SCP2-201ENST00000371509 ABCC10Q5T3U5 1492 aa25.27■■□□□ 1.64
SCP2-201ENST00000371509 CCNB3Q8WWL7 1395 aa25.22■■□□□ 1.63
SCP2-201ENST00000371509 CDC42BPAQ5VT25 1732 aa25.22■■□□□ 1.63
SCP2-201ENST00000371509 DIP2BQ9P265 1576 aa25.21■■□□□ 1.63
SCP2-201ENST00000371509 ABCA9Q8IUA7 1624 aa25.21■■□□□ 1.63
SCP2-201ENST00000371509 GPATCH8Q9UKJ3 1502 aaKnown RBP25.19■■□□□ 1.62
SCP2-201ENST00000371509 MYOM3Q5VTT5 1437 aa25.18■■□□□ 1.62
SCP2-201ENST00000371509 MYO5CQ9NQX4 1742 aa25.18■■□□□ 1.62
SCP2-201ENST00000371509 FAM69CQ0P6D2 419 aa25.18■■□□□ 1.62
SCP2-201ENST00000371509 ITSN2Q9NZM3 1697 aa25.17■■□□□ 1.62
SCP2-201ENST00000371509 KIF13AQ9H1H9 1805 aa25.16■■□□□ 1.62
SCP2-201ENST00000371509 CDC42BPBQ9Y5S2 1711 aa25.16■■□□□ 1.62
SCP2-201ENST00000371509 PREX2Q70Z35 1606 aa25.15■■□□□ 1.62
SCP2-201ENST00000371509 GLI2P10070 1586 aa25.14■■□□□ 1.62
SCP2-201ENST00000371509 FGD6Q6ZV73 1430 aa25.12■■□□□ 1.61
SCP2-201ENST00000371509 MAP3K4Q9Y6R4 1608 aa25.12■■□□□ 1.61
SCP2-201ENST00000371509 CD109Q6YHK3 1445 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms