RNA–Protein interactions for RNA: ENST00000370115.1

VCAM1-203, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene VCAM1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-203ENST00000370115 ARHGEF11O15085 1522 aa7.35□□□□□ -1.23
VCAM1-203ENST00000370115 CENPBP07199 599 aaPredicted RBP7.35□□□□□ -1.23
VCAM1-203ENST00000370115 WDR62O43379 1518 aa7.34□□□□□ -1.23
VCAM1-203ENST00000370115 ARHGAP35Q9NRY4 1499 aa7.34□□□□□ -1.23
VCAM1-203ENST00000370115 MRC2Q9UBG0 1479 aa7.34□□□□□ -1.23
VCAM1-203ENST00000370115 GTF3C3Q9Y5Q9 886 aa7.33□□□□□ -1.24
VCAM1-203ENST00000370115 DHX57Q6P158 1386 aaKnown RBP7.32□□□□□ -1.24
VCAM1-203ENST00000370115 RRBP1Q9P2E9 1410 aaKnown RBP7.32□□□□□ -1.24
VCAM1-203ENST00000370115 IGF1RP08069 1367 aa7.31□□□□□ -1.24
VCAM1-203ENST00000370115 CADPSQ9ULU8 1353 aa7.31□□□□□ -1.24
VCAM1-203ENST00000370115 CYB5RLQ6IPT4 315 aa7.31□□□□□ -1.24
VCAM1-203ENST00000370115 MIER1Q8N108 512 aa7.31□□□□□ -1.24
VCAM1-203ENST00000370115 FGD5Q6ZNL6 1462 aa7.3□□□□□ -1.24
VCAM1-203ENST00000370115 LMTK3Q96Q04 1460 aa7.3□□□□□ -1.24
VCAM1-203ENST00000370115 CLSPNQ9HAW4 1339 aa7.3□□□□□ -1.24
VCAM1-203ENST00000370115 YTHDC1Q96MU7 727 aaKnown RBP7.29□□□□□ -1.24
VCAM1-203ENST00000370115 CARMIL1Q5VZK9 1371 aa7.28□□□□□ -1.24
VCAM1-203ENST00000370115 CCNB3Q8WWL7 1395 aa7.28□□□□□ -1.24
VCAM1-203ENST00000370115 MYT1Q01538 1121 aa7.28□□□□□ -1.24
VCAM1-203ENST00000370115 TIAM1Q13009 1591 aa7.27□□□□□ -1.25
VCAM1-203ENST00000370115 FANCD2Q9BXW9 1451 aa7.25□□□□□ -1.25
VCAM1-203ENST00000370115 ITGAEP38570 1179 aa7.25□□□□□ -1.25
VCAM1-203ENST00000370115 MAP3K1Q13233 1512 aa7.25□□□□□ -1.25
VCAM1-203ENST00000370115 LRRC9Q6ZRR7 1453 aa7.24□□□□□ -1.25
VCAM1-203ENST00000370115 CFAP43Q8NDM7 1665 aa7.23□□□□□ -1.25
VCAM1-203ENST00000370115 DNMBPQ6XZF7 1577 aa7.23□□□□□ -1.25
VCAM1-203ENST00000370115 RAD54L2Q9Y4B4 1467 aa7.23□□□□□ -1.25
VCAM1-203ENST00000370115 PCF11O94913 1555 aaKnown RBP7.23□□□□□ -1.25
VCAM1-203ENST00000370115 RAB3GAP2Q9H2M9 1393 aa7.22□□□□□ -1.25
VCAM1-203ENST00000370115 P3H3Q8IVL6 736 aa7.22□□□□□ -1.25
VCAM1-203ENST00000370115 ABCA10Q8WWZ4 1543 aa7.21□□□□□ -1.25
VCAM1-203ENST00000370115 TOPBP1Q92547 1522 aa7.21□□□□□ -1.25
VCAM1-203ENST00000370115 POLA1P09884 1462 aaPredicted RBP7.21□□□□□ -1.25
VCAM1-203ENST00000370115 FHAD1B1AJZ9 1412 aa7.21□□□□□ -1.25
VCAM1-203ENST00000370115 PHLDB1Q86UU1 1377 aa7.21□□□□□ -1.25
VCAM1-203ENST00000370115 CTTNBP2Q8WZ74 1663 aa7.21□□□□□ -1.26
VCAM1-203ENST00000370115 MAPKBP1O60336 1514 aa7.21□□□□□ -1.26
VCAM1-203ENST00000370115 CUL7Q14999 1698 aa7.2□□□□□ -1.26
VCAM1-203ENST00000370115 FHOD3Q2V2M9 1422 aa7.2□□□□□ -1.26
VCAM1-203ENST00000370115 SETD5Q9C0A6 1442 aa7.19□□□□□ -1.26
VCAM1-203ENST00000370115 WDR97A6NE52 1622 aa7.18□□□□□ -1.26
VCAM1-203ENST00000370115 ATP1B4Q9UN42 357 aaPredicted RBP7.18□□□□□ -1.26
VCAM1-203ENST00000370115 EFCAB5A4FU69 1503 aa7.18□□□□□ -1.26
VCAM1-203ENST00000370115 FAM50AQ14320 339 aaKnown RBP7.18□□□□□ -1.26
VCAM1-203ENST00000370115 FYCO1Q9BQS8 1478 aa7.17□□□□□ -1.26
VCAM1-203ENST00000370115 URB2Q14146 1524 aaKnown RBP7.16□□□□□ -1.26
VCAM1-203ENST00000370115 CASKIN1Q8WXD9 1431 aa7.16□□□□□ -1.26
VCAM1-203ENST00000370115 AQRO60306 1485 aaKnown RBP eCLIP7.16□□□□□ -1.26
VCAM1-203ENST00000370115 LRRIQ1Q96JM4 1722 aa7.15□□□□□ -1.26
VCAM1-203ENST00000370115 FBXO41Q8TF61 875 aa7.15□□□□□ -1.26
VCAM1-203ENST00000370115 ABCA5Q8WWZ7 1642 aa7.14□□□□□ -1.27
VCAM1-203ENST00000370115 SIN3AQ96ST3 1273 aa7.14□□□□□ -1.27
VCAM1-203ENST00000370115 ERCC6L2Q5T890 1561 aa7.14□□□□□ -1.27
VCAM1-203ENST00000370115 SNAPC4Q5SXM2 1469 aa7.13□□□□□ -1.27
VCAM1-203ENST00000370115 FMN1Q68DA7 1419 aa7.13□□□□□ -1.27
VCAM1-203ENST00000370115 SAMD9Q5K651 1589 aa7.13□□□□□ -1.27
VCAM1-203ENST00000370115 TDRD9Q8NDG6 1382 aaKnown RBP7.12□□□□□ -1.27
VCAM1-203ENST00000370115 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.12□□□□□ -1.27
VCAM1-203ENST00000370115 FGD6Q6ZV73 1430 aa7.11□□□□□ -1.27
VCAM1-203ENST00000370115 GAPVD1Q14C86 1478 aa7.11□□□□□ -1.27
VCAM1-203ENST00000370115 MTUS2Q5JR59 1369 aa7.1□□□□□ -1.27
VCAM1-203ENST00000370115 GRIN2BQ13224 1484 aa7.09□□□□□ -1.27
VCAM1-203ENST00000370115 PTPRKQ15262 1439 aa7.09□□□□□ -1.27
VCAM1-203ENST00000370115 KCNH8Q96L42 1107 aa7.09□□□□□ -1.27
VCAM1-203ENST00000370115 ZNF608Q9ULD9 1512 aaPredicted RBP7.09□□□□□ -1.28
VCAM1-203ENST00000370115 IFT140Q96RY7 1462 aa7.08□□□□□ -1.28
VCAM1-203ENST00000370115 TIMELESSQ9UNS1 1208 aa7.08□□□□□ -1.28
VCAM1-203ENST00000370115 SUPT6HQ7KZ85 1726 aaKnown RBP7.08□□□□□ -1.28
VCAM1-203ENST00000370115 TARBP1Q13395 1621 aaKnown RBP7.08□□□□□ -1.28
VCAM1-203ENST00000370115 PTPN23Q9H3S7 1636 aa7.08□□□□□ -1.28
VCAM1-203ENST00000370115 NCOA2Q15596 1464 aa7.08□□□□□ -1.28
VCAM1-203ENST00000370115 CCDC18Q5T9S5 1454 aa7.08□□□□□ -1.28
VCAM1-203ENST00000370115 CHD1O14646 1710 aa7.07□□□□□ -1.28
VCAM1-203ENST00000370115 PPP1R15AO75807 674 aaPredicted RBP7.07□□□□□ -1.28
VCAM1-203ENST00000370115 DDX10Q13206 875 aaKnown RBP7.07□□□□□ -1.28
VCAM1-203ENST00000370115 POTEHQ6S545 545 aa7.07□□□□□ -1.28
VCAM1-203ENST00000370115 PBRM1Q86U86 1689 aa7.07□□□□□ -1.28
VCAM1-203ENST00000370115 SUPT16HQ9Y5B9 1047 aaKnown RBP7.07□□□□□ -1.28
VCAM1-203ENST00000370115 HFM1A2PYH4 1435 aa7.07□□□□□ -1.28
VCAM1-203ENST00000370115 MYOM3Q5VTT5 1437 aa7.07□□□□□ -1.28
VCAM1-203ENST00000370115 EHBP1L1Q8N3D4 1523 aa7.06□□□□□ -1.28
VCAM1-203ENST00000370115 HIRIP3Q9BW71 556 aaPredicted RBP7.06□□□□□ -1.28
VCAM1-203ENST00000370115 MAGI3Q5TCQ9 1506 aa7.06□□□□□ -1.28
VCAM1-203ENST00000370115 UACAQ9BZF9 1416 aa7.06□□□□□ -1.28
VCAM1-203ENST00000370115 NAIPQ13075 1403 aa7.05□□□□□ -1.28
VCAM1-203ENST00000370115 UGGT2Q9NYU1 1516 aa7.05□□□□□ -1.28
VCAM1-203ENST00000370115 KDM4FA0A1W2PPD8 638 aa7.05□□□□□ -1.28
VCAM1-203ENST00000370115 TONSLQ96HA7 1378 aa7.04□□□□□ -1.28
VCAM1-203ENST00000370115 ILDR2Q71H61 639 aa7.03□□□□□ -1.28
VCAM1-203ENST00000370115 EIF4G3O43432 1585 aaKnown RBP7.03□□□□□ -1.28
VCAM1-203ENST00000370115 HECW1Q76N89 1606 aa7.03□□□□□ -1.28
VCAM1-203ENST00000370115 IQGAP2Q13576 1575 aa7.03□□□□□ -1.28
VCAM1-203ENST00000370115 GCC2Q8IWJ2 1684 aa7.02□□□□□ -1.29
VCAM1-203ENST00000370115 ADAMTS12P58397 1594 aa7.02□□□□□ -1.29
VCAM1-203ENST00000370115 EPRSP07814 1512 aaKnown RBP7.01□□□□□ -1.29
VCAM1-203ENST00000370115 CLASP1Q7Z460 1538 aa7.01□□□□□ -1.29
VCAM1-203ENST00000370115 TCOF1Q13428 1488 aaKnown RBP7.01□□□□□ -1.29
VCAM1-203ENST00000370115 KDM5BQ9UGL1 1544 aa7.01□□□□□ -1.29
VCAM1-203ENST00000370115 KDM6BO15054 1643 aa7□□□□□ -1.29
VCAM1-203ENST00000370115 CDK13Q14004 1512 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms