RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 RUSC2Q8N2Y8 1516 aa35.22■■■■□ 3.23
SMNDC1-201ENST00000369592 CARMIL1Q5VZK9 1371 aa35.21■■■■□ 3.23
SMNDC1-201ENST00000369592 KIAA0586Q9BVV6 1533 aa35.12■■■■□ 3.21
SMNDC1-201ENST00000369592 JPH4Q96JJ6 628 aa35.12■■■■□ 3.21
SMNDC1-201ENST00000369592 PRG4Q92954 1404 aaPredicted RBP35.07■■■■□ 3.21
SMNDC1-201ENST00000369592 RAPGEF2Q9Y4G8 1499 aa34.97■■■■□ 3.19
SMNDC1-201ENST00000369592 PRXQ9BXM0 1461 aa34.85■■■■□ 3.17
SMNDC1-201ENST00000369592 IQGAP2Q13576 1575 aa34.84■■■■□ 3.17
SMNDC1-201ENST00000369592 UGGT2Q9NYU1 1516 aa34.71■■■■□ 3.15
SMNDC1-201ENST00000369592 DISP1Q96F81 1524 aa34.69■■■■□ 3.14
SMNDC1-201ENST00000369592 CTTNBP2Q8WZ74 1663 aa34.66■■■■□ 3.14
SMNDC1-201ENST00000369592 EEA1Q15075 1411 aa34.66■■■■□ 3.14
SMNDC1-201ENST00000369592 CARMIL2Q6F5E8 1435 aa34.66■■■■□ 3.14
SMNDC1-201ENST00000369592 CSRNP3Q8WYN3 585 aa34.65■■■■□ 3.14
SMNDC1-201ENST00000369592 CHIC1Q5VXU3 224 aa34.64■■■■□ 3.14
SMNDC1-201ENST00000369592 ADCY10Q96PN6 1610 aa34.63■■■■□ 3.13
SMNDC1-201ENST00000369592 TNIKQ9UKE5 1360 aa34.62■■■■□ 3.13
SMNDC1-201ENST00000369592 PTPRGP23470 1445 aa34.6■■■■□ 3.13
SMNDC1-201ENST00000369592 KIAA0556O60303 1618 aa34.54■■■■□ 3.12
SMNDC1-201ENST00000369592 MAPKBP1O60336 1514 aa34.48■■■■□ 3.11
SMNDC1-201ENST00000369592 UHRF1BP1LA0JNW5 1464 aa34.45■■■■□ 3.1
SMNDC1-201ENST00000369592 KIF13AQ9H1H9 1805 aa34.43■■■■□ 3.1
SMNDC1-201ENST00000369592 GOLGA3Q08378 1498 aa34.39■■■■□ 3.1
SMNDC1-201ENST00000369592 UACAQ9BZF9 1416 aa34.39■■■■□ 3.1
SMNDC1-201ENST00000369592 NPM1P06748 294 aaKnown RBP eCLIP34.39■■■■□ 3.1
SMNDC1-201ENST00000369592 ABCC2Q92887 1545 aa34.38■■■■□ 3.09
SMNDC1-201ENST00000369592 KIF21BO75037 1637 aa34.37■■■■□ 3.09
SMNDC1-201ENST00000369592 ABCC10Q5T3U5 1492 aa34.34■■■■□ 3.09
SMNDC1-201ENST00000369592 FAM9AQ8IZU1 332 aaPredicted RBP34.34■■■■□ 3.09
SMNDC1-201ENST00000369592 TTBK1Q5TCY1 1321 aaPredicted RBP34.33■■■■□ 3.09
SMNDC1-201ENST00000369592 DIP2BQ9P265 1576 aa34.28■■■■□ 3.08
SMNDC1-201ENST00000369592 KDM5BQ9UGL1 1544 aa34.28■■■■□ 3.08
SMNDC1-201ENST00000369592 SAMD9Q5K651 1589 aa34.26■■■■□ 3.07
SMNDC1-201ENST00000369592 ABCA8O94911 1581 aa34.23■■■■□ 3.07
SMNDC1-201ENST00000369592 PLB1Q6P1J6 1458 aa34.21■■■■□ 3.07
SMNDC1-201ENST00000369592 FAM69CQ0P6D2 419 aa34.18■■■■□ 3.06
SMNDC1-201ENST00000369592 ASXL2Q76L83 1435 aa34.16■■■■□ 3.06
SMNDC1-201ENST00000369592 ZCCHC11Q5TAX3 1644 aaKnown RBP34.15■■■■□ 3.06
SMNDC1-201ENST00000369592 GLI2P10070 1586 aa34.08■■■■□ 3.05
SMNDC1-201ENST00000369592 P3H3Q8IVL6 736 aa34.07■■■■□ 3.04
SMNDC1-201ENST00000369592 EFCAB5A4FU69 1503 aa33.99■■■■□ 3.03
SMNDC1-201ENST00000369592 EPRSP07814 1512 aaKnown RBP33.99■■■■□ 3.03
SMNDC1-201ENST00000369592 FHOD3Q2V2M9 1422 aa33.95■■■■□ 3.02
SMNDC1-201ENST00000369592 WDR7Q9Y4E6 1490 aa33.95■■■■□ 3.02
SMNDC1-201ENST00000369592 KDM4FA0A1W2PPD8 638 aa33.94■■■■□ 3.02
SMNDC1-201ENST00000369592 TSPOAP1O95153 1857 aa33.94■■■■□ 3.02
SMNDC1-201ENST00000369592 RAPGEF6Q8TEU7 1601 aa33.93■■■■□ 3.02
SMNDC1-201ENST00000369592 PPRC1Q5VV67 1664 aaKnown RBP33.93■■■■□ 3.02
SMNDC1-201ENST00000369592 ATP10BO94823 1461 aa33.92■■■■□ 3.02
SMNDC1-201ENST00000369592 KDM6BO15054 1643 aa33.92■■■■□ 3.02
SMNDC1-201ENST00000369592 UBTFP17480 764 aaKnown RBP33.9■■■■□ 3.02
SMNDC1-201ENST00000369592 MAP3K4Q9Y6R4 1608 aa33.9■■■■□ 3.02
SMNDC1-201ENST00000369592 RANGAP1P46060 587 aaPredicted RBP33.89■■■■□ 3.02
SMNDC1-201ENST00000369592 NUP153P49790 1475 aaKnown RBP33.84■■■■□ 3.01
SMNDC1-201ENST00000369592 ILDR1Q86SU0 546 aaPredicted RBP33.84■■■■□ 3.01
SMNDC1-201ENST00000369592 EHMT2Q96KQ7 1210 aa33.84■■■■□ 3.01
SMNDC1-201ENST00000369592 ARHGAP35Q9NRY4 1499 aa33.82■■■■□ 3
SMNDC1-201ENST00000369592 CFAP43Q8NDM7 1665 aa33.72■■■□□ 2.99
SMNDC1-201ENST00000369592 ARID3CA6NKF2 412 aa33.72■■■□□ 2.99
SMNDC1-201ENST00000369592 KCNH8Q96L42 1107 aa33.68■■■□□ 2.98
SMNDC1-201ENST00000369592 MAGI3Q5TCQ9 1506 aa33.67■■■□□ 2.98
SMNDC1-201ENST00000369592 TEX14Q8IWB6 1497 aa33.66■■■□□ 2.98
SMNDC1-201ENST00000369592 FMN1Q68DA7 1419 aa33.64■■■□□ 2.98
SMNDC1-201ENST00000369592 CD109Q6YHK3 1445 aa33.64■■■□□ 2.98
SMNDC1-201ENST00000369592 COL17A1Q9UMD9 1497 aaPredicted RBP33.63■■■□□ 2.97
SMNDC1-201ENST00000369592 ABCA9Q8IUA7 1624 aa33.62■■■□□ 2.97
SMNDC1-201ENST00000369592 HECW1Q76N89 1606 aa33.52■■■□□ 2.96
SMNDC1-201ENST00000369592 CDK13Q14004 1512 aaKnown RBP33.52■■■□□ 2.96
SMNDC1-201ENST00000369592 ADGRL1O94910 1474 aa33.51■■■□□ 2.96
SMNDC1-201ENST00000369592 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.51■■■□□ 2.95
SMNDC1-201ENST00000369592 HNRNPUL2Q1KMD3 747 aaKnown RBP33.51■■■□□ 2.95
SMNDC1-201ENST00000369592 PLEKHD1A6NEE1 506 aa33.49■■■□□ 2.95
SMNDC1-201ENST00000369592 LRRIQ1Q96JM4 1722 aa33.45■■■□□ 2.94
SMNDC1-201ENST00000369592 CLIP1P30622 1438 aa33.44■■■□□ 2.94
SMNDC1-201ENST00000369592 ARAP3Q8WWN8 1544 aa33.4■■■□□ 2.94
SMNDC1-201ENST00000369592 CASKIN1Q8WXD9 1431 aa33.4■■■□□ 2.94
SMNDC1-201ENST00000369592 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.39■■■□□ 2.94
SMNDC1-201ENST00000369592 PCF11O94913 1555 aaKnown RBP33.38■■■□□ 2.93
SMNDC1-201ENST00000369592 PHLDB1Q86UU1 1377 aa33.36■■■□□ 2.93
SMNDC1-201ENST00000369592 HECW2Q9P2P5 1572 aa33.35■■■□□ 2.93
SMNDC1-201ENST00000369592 NEO1Q92859 1461 aa33.34■■■□□ 2.93
SMNDC1-201ENST00000369592 TTC37Q6PGP7 1564 aa33.34■■■□□ 2.93
SMNDC1-201ENST00000369592 ATP1B4Q9UN42 357 aaPredicted RBP33.31■■■□□ 2.92
SMNDC1-201ENST00000369592 FYCO1Q9BQS8 1478 aa33.29■■■□□ 2.92
SMNDC1-201ENST00000369592 TROQ12816 1431 aaPredicted RBP33.27■■■□□ 2.92
SMNDC1-201ENST00000369592 CDK11AQ9UQ88 783 aaPredicted RBP33.26■■■□□ 2.91
SMNDC1-201ENST00000369592 CCDC18Q5T9S5 1454 aa33.25■■■□□ 2.91
SMNDC1-201ENST00000369592 CEP162Q5TB80 1403 aa33.23■■■□□ 2.91
SMNDC1-201ENST00000369592 KIF14Q15058 1648 aa33.22■■■□□ 2.91
SMNDC1-201ENST00000369592 PLCH2O75038 1416 aa33.19■■■□□ 2.9
SMNDC1-201ENST00000369592 FANCAO15360 1455 aa33.18■■■□□ 2.9
SMNDC1-201ENST00000369592 FRMPD1Q5SYB0 1578 aa33.17■■■□□ 2.9
SMNDC1-201ENST00000369592 CFAP74Q9C0B2 1584 aa33.17■■■□□ 2.9
SMNDC1-201ENST00000369592 LOC105371045A0A1W2PR82 267 aa33.16■■■□□ 2.9
SMNDC1-201ENST00000369592 AKNAQ7Z591 1439 aa33.16■■■□□ 2.9
SMNDC1-201ENST00000369592 MYO5CQ9NQX4 1742 aa33.12■■■□□ 2.89
SMNDC1-201ENST00000369592 RAPGEF3O95398 923 aa33.11■■■□□ 2.89
SMNDC1-201ENST00000369592 RICTORQ6R327 1708 aa33.1■■■□□ 2.89
SMNDC1-201ENST00000369592 DENND4BO75064 1496 aaPredicted RBP33.06■■■□□ 2.88
SMNDC1-201ENST00000369592 CDC42BPBQ9Y5S2 1711 aa33.01■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms