RNA–Protein interactions for RNA: ENST00000369459.6

BRCC3-203, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5 BASIC

Gene BRCC3, Length 2,641 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-203ENST00000369459 SCAF1Q9H7N4 1312 aaKnown RBP11.54□□□□□ -0.56
BRCC3-203ENST00000369459 RUSC2Q8N2Y8 1516 aa11.53□□□□□ -0.56
BRCC3-203ENST00000369459 CSRNP3Q8WYN3 585 aa11.53□□□□□ -0.56
BRCC3-203ENST00000369459 CUX2O14529 1486 aa11.52□□□□□ -0.57
BRCC3-203ENST00000369459 PBRM1Q86U86 1689 aa11.51□□□□□ -0.57
BRCC3-203ENST00000369459 GOLGA3Q08378 1498 aa11.51□□□□□ -0.57
BRCC3-203ENST00000369459 PRXQ9BXM0 1461 aa11.51□□□□□ -0.57
BRCC3-203ENST00000369459 RAD54L2Q9Y4B4 1467 aa11.49□□□□□ -0.57
BRCC3-203ENST00000369459 PDIA4P13667 645 aaKnown RBP11.46□□□□□ -0.58
BRCC3-203ENST00000369459 GAPVD1Q14C86 1478 aa11.45□□□□□ -0.58
BRCC3-203ENST00000369459 TNIKQ9UKE5 1360 aa11.45□□□□□ -0.58
BRCC3-203ENST00000369459 IGF1RP08069 1367 aa11.44□□□□□ -0.58
BRCC3-203ENST00000369459 EIF4G3O43432 1585 aaKnown RBP11.43□□□□□ -0.58
BRCC3-203ENST00000369459 RAPGEF2Q9Y4G8 1499 aa11.42□□□□□ -0.58
BRCC3-203ENST00000369459 HRCP23327 699 aa11.41□□□□□ -0.58
BRCC3-203ENST00000369459 GRIN2BQ13224 1484 aa11.41□□□□□ -0.58
BRCC3-203ENST00000369459 CTTNBP2Q8WZ74 1663 aa11.41□□□□□ -0.58
BRCC3-203ENST00000369459 NPM2Q86SE8 214 aaKnown RBP11.41□□□□□ -0.58
BRCC3-203ENST00000369459 ADAMTS12P58397 1594 aa11.4□□□□□ -0.58
BRCC3-203ENST00000369459 TPRNQ4KMQ1 711 aa11.39□□□□□ -0.59
BRCC3-203ENST00000369459 CARMIL1Q5VZK9 1371 aa11.39□□□□□ -0.59
BRCC3-203ENST00000369459 CENPBP07199 599 aaPredicted RBP11.38□□□□□ -0.59
BRCC3-203ENST00000369459 LOC105371045A0A1W2PR82 267 aa11.37□□□□□ -0.59
BRCC3-203ENST00000369459 MAGI1Q96QZ7 1491 aaPredicted RBP11.37□□□□□ -0.59
BRCC3-203ENST00000369459 PKNOX2Q96KN3 472 aa11.37□□□□□ -0.59
BRCC3-203ENST00000369459 FHAD1B1AJZ9 1412 aa11.36□□□□□ -0.59
BRCC3-203ENST00000369459 TDRD9Q8NDG6 1382 aaKnown RBP11.35□□□□□ -0.59
BRCC3-203ENST00000369459 ZNF608Q9ULD9 1512 aaPredicted RBP11.34□□□□□ -0.59
BRCC3-203ENST00000369459 CEP162Q5TB80 1403 aa11.32□□□□□ -0.6
BRCC3-203ENST00000369459 AQRO60306 1485 aaKnown RBP eCLIP11.32□□□□□ -0.63e-7■■■□□ 19
BRCC3-203ENST00000369459 PDE4CQ08493 712 aa11.31□□□□□ -0.6
BRCC3-203ENST00000369459 C14orf37Q86TY3 774 aa11.3□□□□□ -0.6
BRCC3-203ENST00000369459 SENP3Q9H4L4 574 aaPredicted RBP11.3□□□□□ -0.6
BRCC3-203ENST00000369459 ANO8Q9HCE9 1232 aaPredicted RBP11.3□□□□□ -0.6
BRCC3-203ENST00000369459 EFCAB5A4FU69 1503 aa11.3□□□□□ -0.6
BRCC3-203ENST00000369459 SYNJ2O15056 1496 aa11.29□□□□□ -0.6
BRCC3-203ENST00000369459 GTF3C3Q9Y5Q9 886 aa11.29□□□□□ -0.6
BRCC3-203ENST00000369459 SNAPC4Q5SXM2 1469 aa11.29□□□□□ -0.6
BRCC3-203ENST00000369459 PPP6R1Q9UPN7 881 aa11.28□□□□□ -0.6
BRCC3-203ENST00000369459 UBTFP17480 764 aaKnown RBP11.28□□□□□ -0.6
BRCC3-203ENST00000369459 CLIP1P30622 1438 aa11.26□□□□□ -0.61
BRCC3-203ENST00000369459 GRIN2AQ12879 1464 aa11.26□□□□□ -0.61
BRCC3-203ENST00000369459 SAMD9Q5K651 1589 aa11.25□□□□□ -0.61
BRCC3-203ENST00000369459 IQGAP2Q13576 1575 aa11.24□□□□□ -0.61
BRCC3-203ENST00000369459 BCANQ96GW7 911 aa11.23□□□□□ -0.61
BRCC3-203ENST00000369459 CHD1O14646 1710 aa11.22□□□□□ -0.61
BRCC3-203ENST00000369459 KIAA0586Q9BVV6 1533 aa11.21□□□□□ -0.61
BRCC3-203ENST00000369459 UGGT2Q9NYU1 1516 aa11.21□□□□□ -0.61
BRCC3-203ENST00000369459 NUP160Q12769 1436 aa11.21□□□□□ -0.62
BRCC3-203ENST00000369459 ARHGAP35Q9NRY4 1499 aa11.2□□□□□ -0.62
BRCC3-203ENST00000369459 NEFLP07196 543 aa11.2□□□□□ -0.62
BRCC3-203ENST00000369459 CHMP4AQ9BY43 222 aa11.2□□□□□ -0.62
BRCC3-203ENST00000369459 VPS8Q8N3P4 1428 aa11.19□□□□□ -0.62
BRCC3-203ENST00000369459 CEP170Q5SW79 1584 aa11.19□□□□□ -0.62
BRCC3-203ENST00000369459 ARAP1Q96P48 1450 aa11.18□□□□□ -0.62
BRCC3-203ENST00000369459 HAP1P54257 671 aaPredicted RBP11.18□□□□□ -0.62
BRCC3-203ENST00000369459 MAP3K1Q13233 1512 aa11.16□□□□□ -0.62
BRCC3-203ENST00000369459 SHROOM2Q13796 1616 aa11.15□□□□□ -0.62
BRCC3-203ENST00000369459 DHX37Q8IY37 1157 aaKnown RBP11.14□□□□□ -0.63
BRCC3-203ENST00000369459 KIAA0556O60303 1618 aa11.13□□□□□ -0.63
BRCC3-203ENST00000369459 TRIM26Q12899 539 aaPredicted RBP11.13□□□□□ -0.63
BRCC3-203ENST00000369459 ANP32EQ9BTT0 268 aa11.13□□□□□ -0.63
BRCC3-203ENST00000369459 BCL11BQ9C0K0 894 aaPredicted RBP11.13□□□□□ -0.63
BRCC3-203ENST00000369459 CHMP7Q8WUX9 453 aaPredicted RBP11.12□□□□□ -0.63
BRCC3-203ENST00000369459 FMN1Q68DA7 1419 aa11.12□□□□□ -0.63
BRCC3-203ENST00000369459 CFAP43Q8NDM7 1665 aa11.11□□□□□ -0.63
BRCC3-203ENST00000369459 SAMD1Q6SPF0 538 aaPredicted RBP11.11□□□□□ -0.63
BRCC3-203ENST00000369459 CLASP1Q7Z460 1538 aa11.11□□□□□ -0.63
BRCC3-203ENST00000369459 FYCO1Q9BQS8 1478 aa11.11□□□□□ -0.63
BRCC3-203ENST00000369459 TAF7LQ5H9L4 462 aa11.09□□□□□ -0.63
BRCC3-203ENST00000369459 FBXO3Q9UK99 471 aa11.09□□□□□ -0.63
BRCC3-203ENST00000369459 DISP1Q96F81 1524 aa11.08□□□□□ -0.64
BRCC3-203ENST00000369459 CASKIN1Q8WXD9 1431 aa11.08□□□□□ -0.64
BRCC3-203ENST00000369459 PCF11O94913 1555 aaKnown RBP11.07□□□□□ -0.64
BRCC3-203ENST00000369459 CARMIL2Q6F5E8 1435 aa11.06□□□□□ -0.64
BRCC3-203ENST00000369459 HECW1Q76N89 1606 aa11.06□□□□□ -0.64
BRCC3-203ENST00000369459 FGD1P98174 961 aa11.05□□□□□ -0.64
BRCC3-203ENST00000369459 TIAM1Q13009 1591 aa11.05□□□□□ -0.64
BRCC3-203ENST00000369459 FHOD3Q2V2M9 1422 aa11.03□□□□□ -0.64
BRCC3-203ENST00000369459 CCDC18Q5T9S5 1454 aa11.03□□□□□ -0.64
BRCC3-203ENST00000369459 LRRIQ1Q96JM4 1722 aa11.03□□□□□ -0.64
BRCC3-203ENST00000369459 RAPGEF6Q8TEU7 1601 aa11.02□□□□□ -0.65
BRCC3-203ENST00000369459 TMEM132AQ24JP5 1023 aa11.02□□□□□ -0.65
BRCC3-203ENST00000369459 BRD2P25440 801 aaKnown RBP11.01□□□□□ -0.65
BRCC3-203ENST00000369459 JPH4Q96JJ6 628 aa10.99□□□□□ -0.65
BRCC3-203ENST00000369459 FBLN2P98095 1184 aa10.99□□□□□ -0.65
BRCC3-203ENST00000369459 ABCA8O94911 1581 aa10.98□□□□□ -0.65
BRCC3-203ENST00000369459 PLCB2Q00722 1185 aa10.96□□□□□ -0.66
BRCC3-203ENST00000369459 PRG4Q92954 1404 aaPredicted RBP10.96□□□□□ -0.66
BRCC3-203ENST00000369459 LRRC9Q6ZRR7 1453 aa10.95□□□□□ -0.66
BRCC3-203ENST00000369459 EHBP1L1Q8N3D4 1523 aa10.95□□□□□ -0.66
BRCC3-203ENST00000369459 CNKSR2Q8WXI2 1034 aa10.94□□□□□ -0.66
BRCC3-203ENST00000369459 EPRSP07814 1512 aaKnown RBP10.94□□□□□ -0.66
BRCC3-203ENST00000369459 SUPT6HQ7KZ85 1726 aaKnown RBP10.94□□□□□ -0.66
BRCC3-203ENST00000369459 ADCY10Q96PN6 1610 aa10.93□□□□□ -0.66
BRCC3-203ENST00000369459 UHRF1BP1LA0JNW5 1464 aa10.92□□□□□ -0.66
BRCC3-203ENST00000369459 NUP153P49790 1475 aaKnown RBP10.91□□□□□ -0.66
BRCC3-203ENST00000369459 CCDC136Q96JN2 1154 aa10.9□□□□□ -0.66
BRCC3-203ENST00000369459 P3H3Q8IVL6 736 aa10.9□□□□□ -0.66
BRCC3-203ENST00000369459 ARHGEF11O15085 1522 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms