RNA–Protein interactions for RNA: ENST00000369459.6

BRCC3-203, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5 BASIC

Gene BRCC3, Length 2,641 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-203ENST00000369459 NISCHQ9Y2I1 1504 aa16.37■□□□□ 0.21
BRCC3-203ENST00000369459 CCDC180Q9P1Z9 1646 aa14.51□□□□□ -0.09
BRCC3-203ENST00000369459 AEBP2Q6ZN18 517 aaPredicted RBP14.22□□□□□ -0.13
BRCC3-203ENST00000369459 SLC24A1O60721 1099 aa14.11□□□□□ -0.15
BRCC3-203ENST00000369459 CHIC1Q5VXU3 224 aa14.04□□□□□ -0.16
BRCC3-203ENST00000369459 ZCCHC6Q5VYS8 1495 aaKnown RBP13.75□□□□□ -0.21
BRCC3-203ENST00000369459 DCAF1Q9Y4B6 1507 aa13.69□□□□□ -0.22
BRCC3-203ENST00000369459 MYO15BQ96JP2 1530 aa13.6□□□□□ -0.23
BRCC3-203ENST00000369459 MYT1Q01538 1121 aa13.54□□□□□ -0.24
BRCC3-203ENST00000369459 PELP1Q8IZL8 1130 aaKnown RBP13.49□□□□□ -0.25
BRCC3-203ENST00000369459 NACADO15069 1562 aa13.45□□□□□ -0.26
BRCC3-203ENST00000369459 ABCC9O60706 1549 aa13.44□□□□□ -0.26
BRCC3-203ENST00000369459 PRKCSHP14314 528 aaPredicted RBP13.33□□□□□ -0.28
BRCC3-203ENST00000369459 RB1CC1Q8TDY2 1594 aa13.33□□□□□ -0.28
BRCC3-203ENST00000369459 TTBK1Q5TCY1 1321 aaPredicted RBP13.33□□□□□ -0.28
BRCC3-203ENST00000369459 DCAF8L2P0C7V8 631 aa13.18□□□□□ -0.3
BRCC3-203ENST00000369459 APLP2Q06481 763 aa13.12□□□□□ -0.31
BRCC3-203ENST00000369459 DAXXQ9UER7 740 aaPredicted RBP13.12□□□□□ -0.31
BRCC3-203ENST00000369459 UNC13AQ9UPW8 1703 aa13.08□□□□□ -0.32
BRCC3-203ENST00000369459 SCRIBQ14160 1630 aa13.06□□□□□ -0.32
BRCC3-203ENST00000369459 ERICH6Q7L0X2 663 aa12.96□□□□□ -0.33
BRCC3-203ENST00000369459 SHROOM4Q9ULL8 1493 aa12.95□□□□□ -0.34
BRCC3-203ENST00000369459 BICRAQ9NZM4 1560 aa12.87□□□□□ -0.35
BRCC3-203ENST00000369459 PHF23Q9BUL5 403 aaPredicted RBP12.84□□□□□ -0.35
BRCC3-203ENST00000369459 BAZ1AQ9NRL2 1556 aaPredicted RBP12.69□□□□□ -0.38
BRCC3-203ENST00000369459 SMARCA4P51532 1647 aa12.63□□□□□ -0.39
BRCC3-203ENST00000369459 CECR2Q9BXF3 1484 aa12.58□□□□□ -0.4
BRCC3-203ENST00000369459 RSF1Q96T23 1441 aaPredicted RBP12.58□□□□□ -0.4
BRCC3-203ENST00000369459 PEG3Q9GZU2 1588 aa12.57□□□□□ -0.4
BRCC3-203ENST00000369459 MROH2BQ7Z745 1585 aa12.56□□□□□ -0.4
BRCC3-203ENST00000369459 PABPN1Q86U42 306 aaKnown RBP eCLIP12.54□□□□□ -0.4
BRCC3-203ENST00000369459 NCBP3Q53F19 620 aaKnown RBP12.49□□□□□ -0.41
BRCC3-203ENST00000369459 WIZO95785 1651 aa12.48□□□□□ -0.41
BRCC3-203ENST00000369459 PLPPR3Q6T4P5 718 aa12.48□□□□□ -0.41
BRCC3-203ENST00000369459 EIF4G1Q04637 1599 aaKnown RBP12.48□□□□□ -0.41
BRCC3-203ENST00000369459 SMARCA2P51531 1590 aa12.47□□□□□ -0.41
BRCC3-203ENST00000369459 TOP2AP11388 1531 aaKnown RBP12.43□□□□□ -0.42
BRCC3-203ENST00000369459 SUPT5HO00267 1087 aaKnown RBP12.42□□□□□ -0.42
BRCC3-203ENST00000369459 EHMT2Q96KQ7 1210 aa12.4□□□□□ -0.42
BRCC3-203ENST00000369459 HMGXB3Q12766 1538 aa12.39□□□□□ -0.43
BRCC3-203ENST00000369459 ATAD2BQ9ULI0 1458 aa12.38□□□□□ -0.43
BRCC3-203ENST00000369459 RTN4Q9NQC3 1192 aaKnown RBP12.37□□□□□ -0.43
BRCC3-203ENST00000369459 NCAPD3P42695 1498 aa12.35□□□□□ -0.43
BRCC3-203ENST00000369459 EIF5BO60841 1220 aaKnown RBP12.34□□□□□ -0.43
BRCC3-203ENST00000369459 BCL11AQ9H165 835 aa12.31□□□□□ -0.44
BRCC3-203ENST00000369459 BAZ1BQ9UIG0 1483 aaKnown RBP12.3□□□□□ -0.44
BRCC3-203ENST00000369459 CC2D2AQ9P2K1 1620 aa12.3□□□□□ -0.44
BRCC3-203ENST00000369459 CCDC88BA6NC98 1476 aa12.2□□□□□ -0.46
BRCC3-203ENST00000369459 PRDM2Q13029 1718 aa12.17□□□□□ -0.46
BRCC3-203ENST00000369459 PLEKHG5O94827 1062 aa12.12□□□□□ -0.47
BRCC3-203ENST00000369459 FAM9AQ8IZU1 332 aaPredicted RBP12.11□□□□□ -0.47
BRCC3-203ENST00000369459 ARXQ96QS3 562 aa12.1□□□□□ -0.47
BRCC3-203ENST00000369459 TIMELESSQ9UNS1 1208 aa12.08□□□□□ -0.48
BRCC3-203ENST00000369459 CFTRP13569 1480 aa12.02□□□□□ -0.48
BRCC3-203ENST00000369459 KLHL34Q8N239 644 aa12.02□□□□□ -0.49
BRCC3-203ENST00000369459 LAMC3Q9Y6N6 1575 aa12□□□□□ -0.49
BRCC3-203ENST00000369459 CADPSQ9ULU8 1353 aa11.95□□□□□ -0.5
BRCC3-203ENST00000369459 BIVM-ERCC5R4GMW8 1640 aa11.92□□□□□ -0.5
BRCC3-203ENST00000369459 RANGAP1P46060 587 aaPredicted RBP11.91□□□□□ -0.5
BRCC3-203ENST00000369459 TOP2BQ02880 1626 aa11.88□□□□□ -0.51
BRCC3-203ENST00000369459 WRNQ14191 1432 aaPredicted RBP eCLIP11.86□□□□□ -0.51
BRCC3-203ENST00000369459 ABCC8Q09428 1581 aa11.85□□□□□ -0.51
BRCC3-203ENST00000369459 SYNJ1O43426 1573 aa11.83□□□□□ -0.52
BRCC3-203ENST00000369459 PDS5BQ9NTI5 1447 aa11.82□□□□□ -0.52
BRCC3-203ENST00000369459 TULP1O00294 542 aaPredicted RBP11.82□□□□□ -0.52
BRCC3-203ENST00000369459 DNAJC5BQ9UF47 199 aa11.82□□□□□ -0.52
BRCC3-203ENST00000369459 FANCD2Q9BXW9 1451 aa11.81□□□□□ -0.52
BRCC3-203ENST00000369459 AMER1Q5JTC6 1135 aaPredicted RBP11.8□□□□□ -0.52
BRCC3-203ENST00000369459 TRIM41Q8WV44 630 aa11.8□□□□□ -0.52
BRCC3-203ENST00000369459 KIF21AQ7Z4S6 1674 aa11.79□□□□□ -0.52
BRCC3-203ENST00000369459 DNMBPQ6XZF7 1577 aa11.79□□□□□ -0.52
BRCC3-203ENST00000369459 CEP164Q9UPV0 1460 aa11.78□□□□□ -0.52
BRCC3-203ENST00000369459 CUX1P39880 1505 aa11.78□□□□□ -0.52
BRCC3-203ENST00000369459 EEA1Q15075 1411 aa11.77□□□□□ -0.52
BRCC3-203ENST00000369459 NESP48681 1621 aa11.77□□□□□ -0.52
BRCC3-203ENST00000369459 PODXL2Q9NZ53 605 aa11.74□□□□□ -0.53
BRCC3-203ENST00000369459 TOPBP1Q92547 1522 aa11.7□□□□□ -0.54
BRCC3-203ENST00000369459 HOMEZQ8IX15 550 aa11.69□□□□□ -0.54
BRCC3-203ENST00000369459 WDR97A6NE52 1622 aa11.68□□□□□ -0.54
BRCC3-203ENST00000369459 MRC2Q9UBG0 1479 aa11.68□□□□□ -0.54
BRCC3-203ENST00000369459 WDR62O43379 1518 aa11.67□□□□□ -0.54
BRCC3-203ENST00000369459 URB2Q14146 1524 aaKnown RBP11.67□□□□□ -0.54
BRCC3-203ENST00000369459 THOC2Q8NI27 1593 aaKnown RBP11.65□□□□□ -0.54
BRCC3-203ENST00000369459 KCNA4P22459 653 aa11.65□□□□□ -0.54
BRCC3-203ENST00000369459 DNAJC5Q9H3Z4 198 aa11.65□□□□□ -0.54
BRCC3-203ENST00000369459 FGD5Q6ZNL6 1462 aa11.65□□□□□ -0.54
BRCC3-203ENST00000369459 KIF21BO75037 1637 aa11.63□□□□□ -0.55
BRCC3-203ENST00000369459 ABCA10Q8WWZ4 1543 aa11.62□□□□□ -0.55
BRCC3-203ENST00000369459 POLA1P09884 1462 aaPredicted RBP11.61□□□□□ -0.55
BRCC3-203ENST00000369459 TARBP1Q13395 1621 aaKnown RBP11.59□□□□□ -0.55
BRCC3-203ENST00000369459 KIF27Q86VH2 1401 aa11.59□□□□□ -0.55
BRCC3-203ENST00000369459 SOGA1O94964 1423 aa11.59□□□□□ -0.55
BRCC3-203ENST00000369459 ERCC6Q03468 1493 aa11.58□□□□□ -0.56
BRCC3-203ENST00000369459 UBE2Q2Q8WVN8 375 aa11.58□□□□□ -0.56
BRCC3-203ENST00000369459 TAOK2Q9UL54 1235 aa11.57□□□□□ -0.56
BRCC3-203ENST00000369459 ABCA5Q8WWZ7 1642 aa11.57□□□□□ -0.56
BRCC3-203ENST00000369459 ERICH3Q5RHP9 1530 aa11.57□□□□□ -0.56
BRCC3-203ENST00000369459 CUL7Q14999 1698 aa11.55□□□□□ -0.56
BRCC3-203ENST00000369459 ADRA2BP18089 450 aa11.55□□□□□ -0.56
BRCC3-203ENST00000369459 IFT140Q96RY7 1462 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms