RNA–Protein interactions for RNA: ENST00000367067.8

CD55-205, Transcript of CD55 molecule (Cromer blood group), human

APPRIS ALT2 TSL 5 BASIC

Gene CD55, Length 1,843 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD55-205	ENST00000367067	RANGAP1	P46060	587 aa	Predicted RBP	33.65	■■■□□ 2.98
CD55-205	ENST00000367067	FBLN2	P98095	1184 aa		33.65	■■■□□ 2.98
CD55-205	ENST00000367067	CHD1	O14646	1710 aa		33.6	■■■□□ 2.97
CD55-205	ENST00000367067	IQGAP2	Q13576	1575 aa		33.54	■■■□□ 2.96
CD55-205	ENST00000367067	CEP170	Q5SW79	1584 aa		33.54	■■■□□ 2.96
CD55-205	ENST00000367067	KIAA0586	Q9BVV6	1533 aa		33.52	■■■□□ 2.96
CD55-205	ENST00000367067	NUP160	Q12769	1436 aa		33.51	■■■□□ 2.96
CD55-205	ENST00000367067	ARHGAP35	Q9NRY4	1499 aa		33.5	■■■□□ 2.95
CD55-205	ENST00000367067	EFCAB5	A4FU69	1503 aa		33.45	■■■□□ 2.94
CD55-205	ENST00000367067	ARAP1	Q96P48	1450 aa		33.43	■■■□□ 2.94
CD55-205	ENST00000367067	SAMD9	Q5K651	1589 aa		33.38	■■■□□ 2.93
CD55-205	ENST00000367067	UGGT2	Q9NYU1	1516 aa		33.36	■■■□□ 2.93
CD55-205	ENST00000367067	VPS8	Q8N3P4	1428 aa		33.35	■■■□□ 2.93
CD55-205	ENST00000367067	P3H3	Q8IVL6	736 aa		33.29	■■■□□ 2.92
CD55-205	ENST00000367067	FHOD3	Q2V2M9	1422 aa		33.27	■■■□□ 2.92
CD55-205	ENST00000367067	CLASP1	Q7Z460	1538 aa		33.22	■■■□□ 2.91
CD55-205	ENST00000367067	JPH4	Q96JJ6	628 aa		33.22	■■■□□ 2.91
CD55-205	ENST00000367067	DISP1	Q96F81	1524 aa		33.2	■■■□□ 2.91
CD55-205	ENST00000367067	KIAA0556	O60303	1618 aa		33.2	■■■□□ 2.9
CD55-205	ENST00000367067	SHROOM2	Q13796	1616 aa		33.14	■■■□□ 2.9
CD55-205	ENST00000367067	FMN1	Q68DA7	1419 aa		33.13	■■■□□ 2.89
CD55-205	ENST00000367067	OSCAR	Q8IYS5	282 aa		33.12	■■■□□ 2.89
CD55-205	ENST00000367067	CARMIL2	Q6F5E8	1435 aa		33.12	■■■□□ 2.89
CD55-205	ENST00000367067	PCF11	O94913	1555 aa	Known RBP	33.06	■■■□□ 2.88
CD55-205	ENST00000367067	PRG4	Q92954	1404 aa	Predicted RBP	33.05	■■■□□ 2.88
CD55-205	ENST00000367067	CASKIN1	Q8WXD9	1431 aa		33	■■■□□ 2.87
CD55-205	ENST00000367067	FYCO1	Q9BQS8	1478 aa		33	■■■□□ 2.87
CD55-205	ENST00000367067	APLP2	Q06481	763 aa		33	■■■□□ 2.87
CD55-205	ENST00000367067	ERCC6L2	Q5T890	1561 aa		32.97	■■■□□ 2.87
CD55-205	ENST00000367067	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.92	■■■□□ 2.86
CD55-205	ENST00000367067	TTBK1	Q5TCY1	1321 aa	Predicted RBP	32.89	■■■□□ 2.86
CD55-205	ENST00000367067	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.89	■■■□□ 2.86
CD55-205	ENST00000367067	MAP3K1	Q13233	1512 aa		32.86	■■■□□ 2.85
CD55-205	ENST00000367067	HECW1	Q76N89	1606 aa		32.85	■■■□□ 2.85
CD55-205	ENST00000367067	TIAM1	Q13009	1591 aa		32.85	■■■□□ 2.85
CD55-205	ENST00000367067	LRRIQ1	Q96JM4	1722 aa		32.84	■■■□□ 2.85
CD55-205	ENST00000367067	RAPGEF6	Q8TEU7	1601 aa		32.83	■■■□□ 2.85
CD55-205	ENST00000367067	CFAP43	Q8NDM7	1665 aa		32.83	■■■□□ 2.85
CD55-205	ENST00000367067	PTPRG	P23470	1445 aa		32.8	■■■□□ 2.84
CD55-205	ENST00000367067	PLB1	Q6P1J6	1458 aa		32.77	■■■□□ 2.84
CD55-205	ENST00000367067	CCDC18	Q5T9S5	1454 aa		32.74	■■■□□ 2.83
CD55-205	ENST00000367067	ABCA8	O94911	1581 aa		32.73	■■■□□ 2.83
CD55-205	ENST00000367067	KANK4	Q5T7N3	995 aa	Predicted RBP	32.73	■■■□□ 2.83
CD55-205	ENST00000367067	NUP153	P49790	1475 aa	Known RBP	32.71	■■■□□ 2.83
CD55-205	ENST00000367067	EPRS	P07814	1512 aa	Known RBP	32.71	■■■□□ 2.83
CD55-205	ENST00000367067	LRRC9	Q6ZRR7	1453 aa		32.68	■■■□□ 2.82
CD55-205	ENST00000367067	CDK13	Q14004	1512 aa	Known RBP	32.64	■■■□□ 2.82
CD55-205	ENST00000367067	ARHGEF11	O15085	1522 aa		32.63	■■■□□ 2.81
CD55-205	ENST00000367067	TRIM26	Q12899	539 aa	Predicted RBP	32.62	■■■□□ 2.81
CD55-205	ENST00000367067	UACA	Q9BZF9	1416 aa		32.62	■■■□□ 2.81
CD55-205	ENST00000367067	ARID3C	A6NKF2	412 aa		32.59	■■■□□ 2.81
CD55-205	ENST00000367067	MTUS2	Q5JR59	1369 aa		32.55	■■■□□ 2.8
CD55-205	ENST00000367067	ABCC2	Q92887	1545 aa		32.55	■■■□□ 2.8
CD55-205	ENST00000367067	RIMBP3C	A6NJZ7	1639 aa		32.52	■■■□□ 2.8
CD55-205	ENST00000367067	RIMBP3B	A6NNM3	1639 aa		32.52	■■■□□ 2.8
CD55-205	ENST00000367067	RIMBP3	Q9UFD9	1639 aa		32.52	■■■□□ 2.8
CD55-205	ENST00000367067	EHBP1L1	Q8N3D4	1523 aa		32.52	■■■□□ 2.8
CD55-205	ENST00000367067	MAGI3	Q5TCQ9	1506 aa		32.51	■■■□□ 2.8
CD55-205	ENST00000367067	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.5	■■■□□ 2.79
CD55-205	ENST00000367067	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.5	■■■□□ 2.79
CD55-205	ENST00000367067	UHRF1BP1L	A0JNW5	1464 aa		32.49	■■■□□ 2.79
CD55-205	ENST00000367067	ATP10B	O94823	1461 aa		32.49	■■■□□ 2.79
CD55-205	ENST00000367067	PCGF6	Q9BYE7	350 aa		32.47	■■■□□ 2.79
CD55-205	ENST00000367067	DNAJC5	Q9H3Z4	198 aa		32.47	■■■□□ 2.79
CD55-205	ENST00000367067	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.46	■■■□□ 2.79
CD55-205	ENST00000367067	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.44	■■■□□ 2.78
CD55-205	ENST00000367067	ADCY10	Q96PN6	1610 aa		32.41	■■■□□ 2.78
CD55-205	ENST00000367067	KDM5B	Q9UGL1	1544 aa		32.35	■■■□□ 2.77
CD55-205	ENST00000367067	NCOA2	Q15596	1464 aa		32.35	■■■□□ 2.77
CD55-205	ENST00000367067	TRO	Q12816	1431 aa	Predicted RBP	32.35	■■■□□ 2.77
CD55-205	ENST00000367067	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.35	■■■□□ 2.77
CD55-205	ENST00000367067	PHLDB1	Q86UU1	1377 aa		32.34	■■■□□ 2.77
CD55-205	ENST00000367067	PLEKHD1	A6NEE1	506 aa		32.33	■■■□□ 2.77
CD55-205	ENST00000367067	CYB5RL	Q6IPT4	315 aa		32.28	■■■□□ 2.76
CD55-205	ENST00000367067	RRBP1	Q9P2E9	1410 aa	Known RBP	32.27	■■■□□ 2.76
CD55-205	ENST00000367067	KIF14	Q15058	1648 aa		32.23	■■■□□ 2.75
CD55-205	ENST00000367067	MYOM3	Q5VTT5	1437 aa		32.2	■■■□□ 2.75
CD55-205	ENST00000367067	CCNB3	Q8WWL7	1395 aa		32.2	■■■□□ 2.75
CD55-205	ENST00000367067	FGD6	Q6ZV73	1430 aa		32.15	■■■□□ 2.74
CD55-205	ENST00000367067	NPM1	P06748	294 aa	Known RBP eCLIP	32.12	■■■□□ 2.73
CD55-205	ENST00000367067	ITSN2	Q9NZM3	1697 aa		32.09	■■■□□ 2.73
CD55-205	ENST00000367067	ABCC10	Q5T3U5	1492 aa		32.09	■■■□□ 2.73
CD55-205	ENST00000367067	WDR7	Q9Y4E6	1490 aa		32.07	■■■□□ 2.72
CD55-205	ENST00000367067	MIA2	Q96PC5	1412 aa		32.06	■■■□□ 2.72
CD55-205	ENST00000367067	CDC42BPA	Q5VT25	1732 aa		32.05	■■■□□ 2.72
CD55-205	ENST00000367067	PTPN23	Q9H3S7	1636 aa		32.05	■■■□□ 2.72
CD55-205	ENST00000367067	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.04	■■■□□ 2.72	4e-6	■■□□□ 11.8
CD55-205	ENST00000367067	FAM50A	Q14320	339 aa	Known RBP	32.04	■■■□□ 2.72
CD55-205	ENST00000367067	ASXL2	Q76L83	1435 aa		32.04	■■■□□ 2.72
CD55-205	ENST00000367067	GPATCH8	Q9UKJ3	1502 aa	Known RBP	32.03	■■■□□ 2.72
CD55-205	ENST00000367067	KCNH8	Q96L42	1107 aa		32.03	■■■□□ 2.72
CD55-205	ENST00000367067	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.01	■■■□□ 2.72	7e-8	■■■□□ 15.9
CD55-205	ENST00000367067	TTC37	Q6PGP7	1564 aa		32	■■■□□ 2.71
CD55-205	ENST00000367067	TCOF1	Q13428	1488 aa	Known RBP	31.98	■■■□□ 2.71
CD55-205	ENST00000367067	MYO5C	Q9NQX4	1742 aa		31.94	■■■□□ 2.7
CD55-205	ENST00000367067	CFDP1	Q9UEE9	299 aa	Predicted RBP	31.94	■■■□□ 2.7
CD55-205	ENST00000367067	PREX2	Q70Z35	1606 aa		31.94	■■■□□ 2.7
CD55-205	ENST00000367067	MAPKBP1	O60336	1514 aa		31.93	■■■□□ 2.7
CD55-205	ENST00000367067	CDC42BPB	Q9Y5S2	1711 aa		31.92	■■■□□ 2.7
CD55-205	ENST00000367067	ITGAE	P38570	1179 aa		31.9	■■■□□ 2.7

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