RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 UBTFP17480 764 aaKnown RBP22.34■■□□□ 1.17
PRKN-204ENST00000366896 RAPGEF2Q9Y4G8 1499 aa22.32■■□□□ 1.16
PRKN-204ENST00000366896 NEUROD1Q13562 356 aa22.32■■□□□ 1.16
PRKN-204ENST00000366896 SNAPC4Q5SXM2 1469 aa22.3■■□□□ 1.16
PRKN-204ENST00000366896 ADAMTS12P58397 1594 aa22.3■■□□□ 1.16
PRKN-204ENST00000366896 MAGI1Q96QZ7 1491 aaPredicted RBP22.27■■□□□ 1.16
PRKN-204ENST00000366896 FHAD1B1AJZ9 1412 aa22.26■■□□□ 1.15
PRKN-204ENST00000366896 MYT1Q01538 1121 aa22.18■■□□□ 1.14
PRKN-204ENST00000366896 SYNJ2O15056 1496 aa22.18■■□□□ 1.14
PRKN-204ENST00000366896 CENPBP07199 599 aaPredicted RBP22.18■■□□□ 1.14
PRKN-204ENST00000366896 DIEXFQ68CQ4 756 aaKnown RBP22.17■■□□□ 1.14
PRKN-204ENST00000366896 GTF3C3Q9Y5Q9 886 aa22.16■■□□□ 1.14
PRKN-204ENST00000366896 GRIN2AQ12879 1464 aa22.13■■□□□ 1.13
PRKN-204ENST00000366896 CHMP7Q8WUX9 453 aaPredicted RBP22.11■■□□□ 1.13
PRKN-204ENST00000366896 CLIP1P30622 1438 aa22.08■■□□□ 1.13
PRKN-204ENST00000366896 FBLN2P98095 1184 aa22.08■■□□□ 1.12
PRKN-204ENST00000366896 CHD1O14646 1710 aa22.07■■□□□ 1.12
PRKN-204ENST00000366896 CTTNBP2Q8WZ74 1663 aa22.06■■□□□ 1.12
PRKN-204ENST00000366896 VPS8Q8N3P4 1428 aa22.06■■□□□ 1.12
PRKN-204ENST00000366896 CEP170Q5SW79 1584 aa22.01■■□□□ 1.11
PRKN-204ENST00000366896 NUP160Q12769 1436 aa22■■□□□ 1.11
PRKN-204ENST00000366896 KIAA0586Q9BVV6 1533 aa21.95■■□□□ 1.1
PRKN-204ENST00000366896 HNRNPUL2Q1KMD3 747 aaKnown RBP21.94■■□□□ 1.1
PRKN-204ENST00000366896 IQGAP2Q13576 1575 aa21.94■■□□□ 1.1
PRKN-204ENST00000366896 RANGAP1P46060 587 aaPredicted RBP21.92■■□□□ 1.1
PRKN-204ENST00000366896 ZNF316A6NFI3 1004 aaPredicted RBP21.85■■□□□ 1.09
PRKN-204ENST00000366896 ARHGAP35Q9NRY4 1499 aa21.85■■□□□ 1.09
PRKN-204ENST00000366896 UGGT2Q9NYU1 1516 aa21.84■■□□□ 1.09
PRKN-204ENST00000366896 APLP2Q06481 763 aa21.83■■□□□ 1.09
PRKN-204ENST00000366896 CLASP1Q7Z460 1538 aa21.83■■□□□ 1.08
PRKN-204ENST00000366896 EFCAB5A4FU69 1503 aa21.82■■□□□ 1.08
PRKN-204ENST00000366896 SAMD9Q5K651 1589 aa21.82■■□□□ 1.08
PRKN-204ENST00000366896 ARAP1Q96P48 1450 aa21.78■■□□□ 1.08
PRKN-204ENST00000366896 JPH4Q96JJ6 628 aa21.78■■□□□ 1.08
PRKN-204ENST00000366896 SHROOM2Q13796 1616 aa21.76■■□□□ 1.07
PRKN-204ENST00000366896 OSCARQ8IYS5 282 aa21.76■■□□□ 1.07
PRKN-204ENST00000366896 DISP1Q96F81 1524 aa21.75■■□□□ 1.07
PRKN-204ENST00000366896 P3H3Q8IVL6 736 aa21.74■■□□□ 1.07
PRKN-204ENST00000366896 CLSPNQ9HAW4 1339 aa21.73■■□□□ 1.07
PRKN-204ENST00000366896 KIAA0556O60303 1618 aa21.73■■□□□ 1.07
PRKN-204ENST00000366896 FHOD3Q2V2M9 1422 aa21.73■■□□□ 1.07
PRKN-204ENST00000366896 PRG4Q92954 1404 aaPredicted RBP21.69■■□□□ 1.06
PRKN-204ENST00000366896 CARMIL2Q6F5E8 1435 aa21.67■■□□□ 1.06
PRKN-204ENST00000366896 YTHDC1Q96MU7 727 aaKnown RBP21.64■■□□□ 1.06
PRKN-204ENST00000366896 KANK4Q5T7N3 995 aaPredicted RBP21.63■■□□□ 1.05
PRKN-204ENST00000366896 ERCC6L2Q5T890 1561 aa21.63■■□□□ 1.05
PRKN-204ENST00000366896 RRBP1Q9P2E9 1410 aaKnown RBP21.61■■□□□ 1.05
PRKN-204ENST00000366896 MIER1Q8N108 512 aa21.61■■□□□ 1.05
PRKN-204ENST00000366896 FMN1Q68DA7 1419 aa21.61■■□□□ 1.05
PRKN-204ENST00000366896 PCF11O94913 1555 aaKnown RBP21.56■■□□□ 1.04
PRKN-204ENST00000366896 DHX57Q6P158 1386 aaKnown RBP21.55■■□□□ 1.04
PRKN-204ENST00000366896 CASKIN1Q8WXD9 1431 aa21.53■■□□□ 1.04
PRKN-204ENST00000366896 FYCO1Q9BQS8 1478 aa21.51■■□□□ 1.03
PRKN-204ENST00000366896 MAP3K1Q13233 1512 aa21.51■■□□□ 1.03
PRKN-204ENST00000366896 PTPRGP23470 1445 aa21.5■■□□□ 1.03
PRKN-204ENST00000366896 RAPGEF6Q8TEU7 1601 aa21.47■■□□□ 1.03
PRKN-204ENST00000366896 PLB1Q6P1J6 1458 aa21.46■■□□□ 1.03
PRKN-204ENST00000366896 ABCA8O94911 1581 aa21.45■■□□□ 1.02
PRKN-204ENST00000366896 HECW1Q76N89 1606 aa21.44■■□□□ 1.02
PRKN-204ENST00000366896 ARHGEF11O15085 1522 aa21.43■■□□□ 1.02
PRKN-204ENST00000366896 LRRIQ1Q96JM4 1722 aa21.43■■□□□ 1.02
PRKN-204ENST00000366896 ATP1B4Q9UN42 357 aaPredicted RBP21.43■■□□□ 1.02
PRKN-204ENST00000366896 CCNB3Q8WWL7 1395 aa21.43■■□□□ 1.02
PRKN-204ENST00000366896 NUP153P49790 1475 aaKnown RBP21.4■■□□□ 1.02
PRKN-204ENST00000366896 TIAM1Q13009 1591 aa21.39■■□□□ 1.01
PRKN-204ENST00000366896 UACAQ9BZF9 1416 aa21.38■■□□□ 1.01
PRKN-204ENST00000366896 CFAP43Q8NDM7 1665 aa21.38■■□□□ 1.01
PRKN-204ENST00000366896 RIMBP3CA6NJZ7 1639 aa21.37■■□□□ 1.01
PRKN-204ENST00000366896 RIMBP3BA6NNM3 1639 aa21.37■■□□□ 1.01
PRKN-204ENST00000366896 RIMBP3Q9UFD9 1639 aa21.37■■□□□ 1.01
PRKN-204ENST00000366896 EPRSP07814 1512 aaKnown RBP21.37■■□□□ 1.01
PRKN-204ENST00000366896 CCDC18Q5T9S5 1454 aa21.35■■□□□ 1.01
PRKN-204ENST00000366896 ABCC2Q92887 1545 aa21.35■■□□□ 1.01
PRKN-204ENST00000366896 ITGAEP38570 1179 aa21.33■■□□□ 1
PRKN-204ENST00000366896 CDK13Q14004 1512 aaKnown RBP21.33■■□□□ 1
PRKN-204ENST00000366896 UHRF1BP1LA0JNW5 1464 aa21.32■■□□□ 1
PRKN-204ENST00000366896 ARID3CA6NKF2 412 aa21.31■■□□□ 1
PRKN-204ENST00000366896 ADCY10Q96PN6 1610 aa21.28■■□□□ 1
PRKN-204ENST00000366896 ATP10BO94823 1461 aa21.28■■□□□ 1
PRKN-204ENST00000366896 LRRC9Q6ZRR7 1453 aa21.28■■□□□ 1
PRKN-204ENST00000366896 MAGI3Q5TCQ9 1506 aa21.24■□□□□ 0.99
PRKN-204ENST00000366896 RAB3GAP2Q9H2M9 1393 aa21.23■□□□□ 0.99
PRKN-204ENST00000366896 KDM5BQ9UGL1 1544 aa21.23■□□□□ 0.99
PRKN-204ENST00000366896 SUPT16HQ9Y5B9 1047 aaKnown RBP21.21■□□□□ 0.99
PRKN-204ENST00000366896 ZCCHC11Q5TAX3 1644 aaKnown RBP21.21■□□□□ 0.99
PRKN-204ENST00000366896 EHBP1L1Q8N3D4 1523 aa21.2■□□□□ 0.98
PRKN-204ENST00000366896 MTUS2Q5JR59 1369 aa21.2■□□□□ 0.98
PRKN-204ENST00000366896 MAPKBP1O60336 1514 aa21.2■□□□□ 0.98
PRKN-204ENST00000366896 PHLDB1Q86UU1 1377 aa21.2■□□□□ 0.98
PRKN-204ENST00000366896 CYB5RLQ6IPT4 315 aa21.19■□□□□ 0.98
PRKN-204ENST00000366896 CDK11AQ9UQ88 783 aaPredicted RBP21.17■□□□□ 0.98
PRKN-204ENST00000366896 SETD5Q9C0A6 1442 aa21.16■□□□□ 0.98
PRKN-204ENST00000366896 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.15■□□□□ 0.98
PRKN-204ENST00000366896 TROQ12816 1431 aaPredicted RBP21.14■□□□□ 0.98
PRKN-204ENST00000366896 SUPT6HQ7KZ85 1726 aaKnown RBP21.13■□□□□ 0.97
PRKN-204ENST00000366896 PLEKHD1A6NEE1 506 aa21.12■□□□□ 0.97
PRKN-204ENST00000366896 NCOA2Q15596 1464 aa21.1■□□□□ 0.97
PRKN-204ENST00000366896 FAM50AQ14320 339 aaKnown RBP21.09■□□□□ 0.97
PRKN-204ENST00000366896 TIMELESSQ9UNS1 1208 aa21.08■□□□□ 0.97
PRKN-204ENST00000366896 DNAJC5Q9H3Z4 198 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms