RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 SHROOM2Q13796 1616 aa26.09■■□□□ 1.77
PRKN-203ENST00000366894 CARMIL1Q5VZK9 1371 aa26.06■■□□□ 1.76
PRKN-203ENST00000366894 JPH4Q96JJ6 628 aa25.96■■□□□ 1.75
PRKN-203ENST00000366894 KIAA0586Q9BVV6 1533 aa25.95■■□□□ 1.74
PRKN-203ENST00000366894 PRG4Q92954 1404 aaPredicted RBP25.93■■□□□ 1.74
PRKN-203ENST00000366894 KIF13AQ9H1H9 1805 aa25.91■■□□□ 1.74
PRKN-203ENST00000366894 RAPGEF2Q9Y4G8 1499 aa25.88■■□□□ 1.73
PRKN-203ENST00000366894 PRXQ9BXM0 1461 aa25.79■■□□□ 1.72
PRKN-203ENST00000366894 IQGAP2Q13576 1575 aa25.78■■□□□ 1.72
PRKN-203ENST00000366894 CHIC1Q5VXU3 224 aa25.76■■□□□ 1.71
PRKN-203ENST00000366894 ABCC10Q5T3U5 1492 aa25.75■■□□□ 1.71
PRKN-203ENST00000366894 MAPKBP1O60336 1514 aa25.73■■□□□ 1.71
PRKN-203ENST00000366894 NPM1P06748 294 aaKnown RBP eCLIP25.73■■□□□ 1.71
PRKN-203ENST00000366894 FAM69CQ0P6D2 419 aa25.72■■□□□ 1.71
PRKN-203ENST00000366894 DIP2BQ9P265 1576 aa25.69■■□□□ 1.7
PRKN-203ENST00000366894 CSRNP3Q8WYN3 585 aa25.69■■□□□ 1.7
PRKN-203ENST00000366894 ADCY10Q96PN6 1610 aa25.67■■□□□ 1.7
PRKN-203ENST00000366894 EEA1Q15075 1411 aa25.67■■□□□ 1.7
PRKN-203ENST00000366894 DISP1Q96F81 1524 aa25.66■■□□□ 1.7
PRKN-203ENST00000366894 UGGT2Q9NYU1 1516 aa25.66■■□□□ 1.7
PRKN-203ENST00000366894 CTTNBP2Q8WZ74 1663 aa25.64■■□□□ 1.7
PRKN-203ENST00000366894 CARMIL2Q6F5E8 1435 aa25.63■■□□□ 1.69
PRKN-203ENST00000366894 TNIKQ9UKE5 1360 aa25.59■■□□□ 1.69
PRKN-203ENST00000366894 PTPRGP23470 1445 aa25.59■■□□□ 1.69
PRKN-203ENST00000366894 KDM6BO15054 1643 aa25.58■■□□□ 1.69
PRKN-203ENST00000366894 FAM9AQ8IZU1 332 aaPredicted RBP25.57■■□□□ 1.68
PRKN-203ENST00000366894 KIAA0556O60303 1618 aa25.55■■□□□ 1.68
PRKN-203ENST00000366894 TTBK1Q5TCY1 1321 aaPredicted RBP25.51■■□□□ 1.67
PRKN-203ENST00000366894 TSPOAP1O95153 1857 aa25.49■■□□□ 1.67
PRKN-203ENST00000366894 KIF21BO75037 1637 aa25.45■■□□□ 1.67
PRKN-203ENST00000366894 GOLGA3Q08378 1498 aa25.44■■□□□ 1.66
PRKN-203ENST00000366894 UHRF1BP1LA0JNW5 1464 aa25.42■■□□□ 1.66
PRKN-203ENST00000366894 KDM4FA0A1W2PPD8 638 aa25.42■■□□□ 1.66
PRKN-203ENST00000366894 UACAQ9BZF9 1416 aa25.42■■□□□ 1.66
PRKN-203ENST00000366894 ABCC2Q92887 1545 aa25.4■■□□□ 1.66
PRKN-203ENST00000366894 SAMD9Q5K651 1589 aa25.35■■□□□ 1.65
PRKN-203ENST00000366894 PLB1Q6P1J6 1458 aa25.34■■□□□ 1.65
PRKN-203ENST00000366894 ASXL2Q76L83 1435 aa25.33■■□□□ 1.65
PRKN-203ENST00000366894 GLI2P10070 1586 aa25.31■■□□□ 1.64
PRKN-203ENST00000366894 KDM5BQ9UGL1 1544 aa25.31■■□□□ 1.64
PRKN-203ENST00000366894 ABCA8O94911 1581 aa25.31■■□□□ 1.64
PRKN-203ENST00000366894 P3H3Q8IVL6 736 aa25.29■■□□□ 1.64
PRKN-203ENST00000366894 PPRC1Q5VV67 1664 aaKnown RBP25.27■■□□□ 1.64
PRKN-203ENST00000366894 EHMT2Q96KQ7 1210 aa25.25■■□□□ 1.63
PRKN-203ENST00000366894 ZCCHC11Q5TAX3 1644 aaKnown RBP25.25■■□□□ 1.63
PRKN-203ENST00000366894 RANGAP1P46060 587 aaPredicted RBP25.22■■□□□ 1.63
PRKN-203ENST00000366894 ADGRL1O94910 1474 aa25.2■■□□□ 1.62
PRKN-203ENST00000366894 UBTFP17480 764 aaKnown RBP25.18■■□□□ 1.62
PRKN-203ENST00000366894 FHOD3Q2V2M9 1422 aa25.18■■□□□ 1.62
PRKN-203ENST00000366894 EPRSP07814 1512 aaKnown RBP25.17■■□□□ 1.62
PRKN-203ENST00000366894 MAP3K4Q9Y6R4 1608 aa25.17■■□□□ 1.62
PRKN-203ENST00000366894 TEX14Q8IWB6 1497 aa25.16■■□□□ 1.62
PRKN-203ENST00000366894 EFCAB5A4FU69 1503 aa25.16■■□□□ 1.62
PRKN-203ENST00000366894 COL17A1Q9UMD9 1497 aaPredicted RBP25.11■■□□□ 1.61
PRKN-203ENST00000366894 RAPGEF6Q8TEU7 1601 aa25.11■■□□□ 1.61
PRKN-203ENST00000366894 WDR7Q9Y4E6 1490 aa25.09■■□□□ 1.61
PRKN-203ENST00000366894 ATP10BO94823 1461 aa25.09■■□□□ 1.61
PRKN-203ENST00000366894 ILDR1Q86SU0 546 aaPredicted RBP25.08■■□□□ 1.61
PRKN-203ENST00000366894 ARHGAP35Q9NRY4 1499 aa25.06■■□□□ 1.6
PRKN-203ENST00000366894 NUP153P49790 1475 aaKnown RBP25.05■■□□□ 1.6
PRKN-203ENST00000366894 ARID3CA6NKF2 412 aa25.05■■□□□ 1.6
PRKN-203ENST00000366894 HECW2Q9P2P5 1572 aa24.99■■□□□ 1.59
PRKN-203ENST00000366894 KCNH8Q96L42 1107 aa24.94■■□□□ 1.58
PRKN-203ENST00000366894 CFAP43Q8NDM7 1665 aa24.92■■□□□ 1.58
PRKN-203ENST00000366894 MAGI3Q5TCQ9 1506 aa24.91■■□□□ 1.58
PRKN-203ENST00000366894 FMN1Q68DA7 1419 aa24.91■■□□□ 1.58
PRKN-203ENST00000366894 CD109Q6YHK3 1445 aa24.91■■□□□ 1.58
PRKN-203ENST00000366894 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.86■■□□□ 1.57
PRKN-203ENST00000366894 HNRNPUL2Q1KMD3 747 aaKnown RBP24.86■■□□□ 1.57
PRKN-203ENST00000366894 CDK13Q14004 1512 aaKnown RBP24.86■■□□□ 1.57
PRKN-203ENST00000366894 ABCA9Q8IUA7 1624 aa24.83■■□□□ 1.57
PRKN-203ENST00000366894 CLIP1P30622 1438 aa24.82■■□□□ 1.56
PRKN-203ENST00000366894 HECW1Q76N89 1606 aa24.82■■□□□ 1.56
PRKN-203ENST00000366894 PLEKHD1A6NEE1 506 aa24.78■■□□□ 1.56
PRKN-203ENST00000366894 LRRIQ1Q96JM4 1722 aa24.77■■□□□ 1.56
PRKN-203ENST00000366894 ATP1B4Q9UN42 357 aaPredicted RBP24.76■■□□□ 1.55
PRKN-203ENST00000366894 PCF11O94913 1555 aaKnown RBP24.75■■□□□ 1.55
PRKN-203ENST00000366894 CASKIN1Q8WXD9 1431 aa24.74■■□□□ 1.55
PRKN-203ENST00000366894 ARAP3Q8WWN8 1544 aa24.73■■□□□ 1.55
PRKN-203ENST00000366894 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.71■■□□□ 1.55
PRKN-203ENST00000366894 LOC105371045A0A1W2PR82 267 aa24.7■■□□□ 1.54
PRKN-203ENST00000366894 CEP162Q5TB80 1403 aa24.69■■□□□ 1.54
PRKN-203ENST00000366894 TTC37Q6PGP7 1564 aa24.67■■□□□ 1.54
PRKN-203ENST00000366894 FYCO1Q9BQS8 1478 aa24.66■■□□□ 1.54
PRKN-203ENST00000366894 PHLDB1Q86UU1 1377 aa24.65■■□□□ 1.54
PRKN-203ENST00000366894 TROQ12816 1431 aaPredicted RBP24.62■■□□□ 1.53
PRKN-203ENST00000366894 CCDC18Q5T9S5 1454 aa24.62■■□□□ 1.53
PRKN-203ENST00000366894 NEO1Q92859 1461 aa24.62■■□□□ 1.53
PRKN-203ENST00000366894 KIF14Q15058 1648 aa24.61■■□□□ 1.53
PRKN-203ENST00000366894 CDK11AQ9UQ88 783 aaPredicted RBP24.61■■□□□ 1.53
PRKN-203ENST00000366894 PTPRMP28827 1452 aa24.58■■□□□ 1.53
PRKN-203ENST00000366894 ADAMTSL3P82987 1691 aa24.58■■□□□ 1.53
PRKN-203ENST00000366894 RAPGEF3O95398 923 aa24.55■■□□□ 1.52
PRKN-203ENST00000366894 FANCAO15360 1455 aa24.55■■□□□ 1.52
PRKN-203ENST00000366894 PLCH2O75038 1416 aa24.54■■□□□ 1.52
PRKN-203ENST00000366894 FBXO41Q8TF61 875 aa24.53■■□□□ 1.52
PRKN-203ENST00000366894 FRMPD1Q5SYB0 1578 aa24.52■■□□□ 1.52
PRKN-203ENST00000366894 AKNAQ7Z591 1439 aa24.52■■□□□ 1.52
PRKN-203ENST00000366894 CFAP74Q9C0B2 1584 aa24.5■■□□□ 1.51
PRKN-203ENST00000366894 BCORL1Q5H9F3 1711 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms