RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 JPH4Q96JJ6 628 aa33.51■■■□□ 2.95
H3F3A-204ENST00000366816 SHROOM2Q13796 1616 aa33.49■■■□□ 2.95
H3F3A-204ENST00000366816 RAPGEF2Q9Y4G8 1499 aa33.45■■■□□ 2.95
H3F3A-204ENST00000366816 KIAA0586Q9BVV6 1533 aa33.44■■■□□ 2.94
H3F3A-204ENST00000366816 PRG4Q92954 1404 aaPredicted RBP33.44■■■□□ 2.94
H3F3A-204ENST00000366816 FAM9AQ8IZU1 332 aaPredicted RBP33.35■■■□□ 2.93
H3F3A-204ENST00000366816 CSRNP3Q8WYN3 585 aa33.35■■■□□ 2.93
H3F3A-204ENST00000366816 PRXQ9BXM0 1461 aa33.31■■■□□ 2.92
H3F3A-204ENST00000366816 IQGAP2Q13576 1575 aa33.23■■■□□ 2.91
H3F3A-204ENST00000366816 EEA1Q15075 1411 aa33.23■■■□□ 2.91
H3F3A-204ENST00000366816 TTBK1Q5TCY1 1321 aaPredicted RBP33.12■■■□□ 2.89
H3F3A-204ENST00000366816 CARMIL2Q6F5E8 1435 aa33.09■■■□□ 2.89
H3F3A-204ENST00000366816 CTTNBP2Q8WZ74 1663 aa33.07■■■□□ 2.89
H3F3A-204ENST00000366816 DISP1Q96F81 1524 aa33.05■■■□□ 2.88
H3F3A-204ENST00000366816 UGGT2Q9NYU1 1516 aa33.05■■■□□ 2.88
H3F3A-204ENST00000366816 TRHP20396 242 aaPredicted RBP33.03■■■□□ 2.88
H3F3A-204ENST00000366816 PTPRGP23470 1445 aa33.02■■■□□ 2.88
H3F3A-204ENST00000366816 TNIKQ9UKE5 1360 aa33.01■■■□□ 2.88
H3F3A-204ENST00000366816 EHMT2Q96KQ7 1210 aa33■■■□□ 2.87
H3F3A-204ENST00000366816 KIAA0556O60303 1618 aa32.92■■■□□ 2.86
H3F3A-204ENST00000366816 KIF21BO75037 1637 aa32.91■■■□□ 2.86
H3F3A-204ENST00000366816 ADCY10Q96PN6 1610 aa32.89■■■□□ 2.86
H3F3A-204ENST00000366816 RANGAP1P46060 587 aaPredicted RBP32.87■■■□□ 2.85
H3F3A-204ENST00000366816 NPM1P06748 294 aaKnown RBP eCLIP32.85■■■□□ 2.85
H3F3A-204ENST00000366816 GOLGA3Q08378 1498 aa32.85■■■□□ 2.85
H3F3A-204ENST00000366816 P3H3Q8IVL6 736 aa32.84■■■□□ 2.85
H3F3A-204ENST00000366816 UBTFP17480 764 aaKnown RBP32.79■■■□□ 2.84
H3F3A-204ENST00000366816 UACAQ9BZF9 1416 aa32.77■■■□□ 2.84
H3F3A-204ENST00000366816 UHRF1BP1LA0JNW5 1464 aa32.69■■■□□ 2.82
H3F3A-204ENST00000366816 PLB1Q6P1J6 1458 aa32.68■■■□□ 2.82
H3F3A-204ENST00000366816 ABCC2Q92887 1545 aa32.68■■■□□ 2.82
H3F3A-204ENST00000366816 SAMD9Q5K651 1589 aa32.67■■■□□ 2.82
H3F3A-204ENST00000366816 MAPKBP1O60336 1514 aa32.64■■■□□ 2.82
H3F3A-204ENST00000366816 FAM69CQ0P6D2 419 aa32.58■■■□□ 2.81
H3F3A-204ENST00000366816 FHOD3Q2V2M9 1422 aa32.58■■■□□ 2.81
H3F3A-204ENST00000366816 ABCA8O94911 1581 aa32.58■■■□□ 2.81
H3F3A-204ENST00000366816 KDM5BQ9UGL1 1544 aa32.56■■■□□ 2.8
H3F3A-204ENST00000366816 ABCC10Q5T3U5 1492 aa32.54■■■□□ 2.8
H3F3A-204ENST00000366816 KIF13AQ9H1H9 1805 aa32.53■■■□□ 2.8
H3F3A-204ENST00000366816 ASXL2Q76L83 1435 aa32.52■■■□□ 2.8
H3F3A-204ENST00000366816 ARID3CA6NKF2 412 aa32.51■■■□□ 2.79
H3F3A-204ENST00000366816 ZCCHC11Q5TAX3 1644 aaKnown RBP32.5■■■□□ 2.79
H3F3A-204ENST00000366816 EFCAB5A4FU69 1503 aa32.49■■■□□ 2.79
H3F3A-204ENST00000366816 DIP2BQ9P265 1576 aa32.48■■■□□ 2.79
H3F3A-204ENST00000366816 ARHGAP35Q9NRY4 1499 aa32.42■■■□□ 2.78
H3F3A-204ENST00000366816 RAPGEF6Q8TEU7 1601 aa32.39■■■□□ 2.78
H3F3A-204ENST00000366816 ATP10BO94823 1461 aa32.36■■■□□ 2.77
H3F3A-204ENST00000366816 EPRSP07814 1512 aaKnown RBP32.31■■■□□ 2.76
H3F3A-204ENST00000366816 NUP153P49790 1475 aaKnown RBP32.31■■■□□ 2.76
H3F3A-204ENST00000366816 WDR7Q9Y4E6 1490 aa32.31■■■□□ 2.76
H3F3A-204ENST00000366816 KCNH8Q96L42 1107 aa32.31■■■□□ 2.76
H3F3A-204ENST00000366816 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.3■■■□□ 2.76
H3F3A-204ENST00000366816 HNRNPUL2Q1KMD3 747 aaKnown RBP32.3■■■□□ 2.76
H3F3A-204ENST00000366816 LOC105371045A0A1W2PR82 267 aa32.26■■■□□ 2.75
H3F3A-204ENST00000366816 GLI2P10070 1586 aa32.26■■■□□ 2.75
H3F3A-204ENST00000366816 TSPOAP1O95153 1857 aa32.26■■■□□ 2.75
H3F3A-204ENST00000366816 ATP1B4Q9UN42 357 aaPredicted RBP32.24■■■□□ 2.75
H3F3A-204ENST00000366816 FMN1Q68DA7 1419 aa32.22■■■□□ 2.75
H3F3A-204ENST00000366816 CLIP1P30622 1438 aa32.2■■■□□ 2.75
H3F3A-204ENST00000366816 MAP3K4Q9Y6R4 1608 aa32.12■■■□□ 2.73
H3F3A-204ENST00000366816 CDK13Q14004 1512 aaKnown RBP32.11■■■□□ 2.73
H3F3A-204ENST00000366816 PPRC1Q5VV67 1664 aaKnown RBP32.1■■■□□ 2.73
H3F3A-204ENST00000366816 PLEKHD1A6NEE1 506 aa32.09■■■□□ 2.73
H3F3A-204ENST00000366816 HECW1Q76N89 1606 aa32.07■■■□□ 2.72
H3F3A-204ENST00000366816 CD109Q6YHK3 1445 aa32.06■■■□□ 2.72
H3F3A-204ENST00000366816 CEP162Q5TB80 1403 aa32.05■■■□□ 2.72
H3F3A-204ENST00000366816 CFAP43Q8NDM7 1665 aa31.99■■■□□ 2.71
H3F3A-204ENST00000366816 PCF11O94913 1555 aaKnown RBP31.99■■■□□ 2.71
H3F3A-204ENST00000366816 CASKIN1Q8WXD9 1431 aa31.99■■■□□ 2.71
H3F3A-204ENST00000366816 KDM6BO15054 1643 aa31.97■■■□□ 2.71
H3F3A-204ENST00000366816 TEX14Q8IWB6 1497 aa31.97■■■□□ 2.71
H3F3A-204ENST00000366816 LRRIQ1Q96JM4 1722 aa31.95■■■□□ 2.7
H3F3A-204ENST00000366816 ABCA9Q8IUA7 1624 aa31.94■■■□□ 2.7
H3F3A-204ENST00000366816 MAGI3Q5TCQ9 1506 aa31.94■■■□□ 2.7
H3F3A-204ENST00000366816 COL17A1Q9UMD9 1497 aaPredicted RBP31.91■■■□□ 2.7
H3F3A-204ENST00000366816 CDK11AQ9UQ88 783 aaPredicted RBP31.9■■■□□ 2.7
H3F3A-204ENST00000366816 FYCO1Q9BQS8 1478 aa31.88■■■□□ 2.69
H3F3A-204ENST00000366816 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.85■■■□□ 2.691e-31■■■■□ 21.2
H3F3A-204ENST00000366816 CCDC18Q5T9S5 1454 aa31.82■■■□□ 2.68
H3F3A-204ENST00000366816 TROQ12816 1431 aaPredicted RBP31.8■■■□□ 2.68
H3F3A-204ENST00000366816 TTC37Q6PGP7 1564 aa31.8■■■□□ 2.68
H3F3A-204ENST00000366816 KIF14Q15058 1648 aa31.75■■■□□ 2.67
H3F3A-204ENST00000366816 NEO1Q92859 1461 aa31.69■■■□□ 2.66
H3F3A-204ENST00000366816 ARAP3Q8WWN8 1544 aa31.67■■■□□ 2.66
H3F3A-204ENST00000366816 PHLDB1Q86UU1 1377 aa31.67■■■□□ 2.66
H3F3A-204ENST00000366816 FANCAO15360 1455 aa31.66■■■□□ 2.66
H3F3A-204ENST00000366816 AEBP2Q6ZN18 517 aaPredicted RBP31.66■■■□□ 2.66
H3F3A-204ENST00000366816 PLCH2O75038 1416 aa31.66■■■□□ 2.66
H3F3A-204ENST00000366816 RAPGEF3O95398 923 aa31.65■■■□□ 2.66
H3F3A-204ENST00000366816 VPS8Q8N3P4 1428 aa31.64■■■□□ 2.66
H3F3A-204ENST00000366816 AKNAQ7Z591 1439 aa31.62■■■□□ 2.65
H3F3A-204ENST00000366816 MYO5CQ9NQX4 1742 aa31.58■■■□□ 2.65
H3F3A-204ENST00000366816 MTUS2Q5JR59 1369 aa31.57■■■□□ 2.64
H3F3A-204ENST00000366816 EFCAB2Q5VUJ9 269 aa31.57■■■□□ 2.64
H3F3A-204ENST00000366816 CFAP74Q9C0B2 1584 aa31.54■■■□□ 2.64
H3F3A-204ENST00000366816 ARHGAP5Q13017 1502 aa31.52■■■□□ 2.64
H3F3A-204ENST00000366816 DENND4BO75064 1496 aaPredicted RBP31.51■■■□□ 2.63
H3F3A-204ENST00000366816 ADGRL1O94910 1474 aa31.49■■■□□ 2.63
H3F3A-204ENST00000366816 SCAPERQ9BY12 1400 aa31.49■■■□□ 2.63
H3F3A-204ENST00000366816 FRMPD1Q5SYB0 1578 aa31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms