RNA–Protein interactions for RNA: ENST00000366732.5

MRPL55-206, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-206ENST00000366732 JPH4Q96JJ6 628 aa26.3■■□□□ 1.8
MRPL55-206ENST00000366732 CYB5RLQ6IPT4 315 aa26.28■■□□□ 1.8
MRPL55-206ENST00000366732 KIAA0586Q9BVV6 1533 aa26.27■■□□□ 1.8
MRPL55-206ENST00000366732 FAM9AQ8IZU1 332 aaPredicted RBP26.24■■□□□ 1.79
MRPL55-206ENST00000366732 PRXQ9BXM0 1461 aa26.21■■□□□ 1.79
MRPL55-206ENST00000366732 SHROOM2Q13796 1616 aa26.19■■□□□ 1.78
MRPL55-206ENST00000366732 PRG4Q92954 1404 aaPredicted RBP26.19■■□□□ 1.78
MRPL55-206ENST00000366732 ARAP1Q96P48 1450 aa26.18■■□□□ 1.78
MRPL55-206ENST00000366732 IQGAP2Q13576 1575 aa26.1■■□□□ 1.77
MRPL55-206ENST00000366732 ERCC6L2Q5T890 1561 aa26.08■■□□□ 1.77
MRPL55-206ENST00000366732 CARMIL2Q6F5E8 1435 aa26.06■■□□□ 1.76
MRPL55-206ENST00000366732 CTTNBP2Q8WZ74 1663 aa25.98■■□□□ 1.75
MRPL55-206ENST00000366732 UGGT2Q9NYU1 1516 aa25.96■■□□□ 1.75
MRPL55-206ENST00000366732 KIF21BO75037 1637 aa25.96■■□□□ 1.75
MRPL55-206ENST00000366732 TNIKQ9UKE5 1360 aa25.94■■□□□ 1.74
MRPL55-206ENST00000366732 PTPRGP23470 1445 aa25.92■■□□□ 1.74
MRPL55-206ENST00000366732 TTBK1Q5TCY1 1321 aaPredicted RBP25.91■■□□□ 1.74
MRPL55-206ENST00000366732 UBTFP17480 764 aaKnown RBP25.91■■□□□ 1.74
MRPL55-206ENST00000366732 GOLGA3Q08378 1498 aa25.91■■□□□ 1.74
MRPL55-206ENST00000366732 EHMT2Q96KQ7 1210 aa25.89■■□□□ 1.74
MRPL55-206ENST00000366732 DISP1Q96F81 1524 aa25.88■■□□□ 1.73
MRPL55-206ENST00000366732 NPM1P06748 294 aaKnown RBP eCLIP25.85■■□□□ 1.73
MRPL55-206ENST00000366732 KIAA0556O60303 1618 aa25.82■■□□□ 1.72
MRPL55-206ENST00000366732 RANGAP1P46060 587 aaPredicted RBP25.8■■□□□ 1.72
MRPL55-206ENST00000366732 TRHP20396 242 aaPredicted RBP25.77■■□□□ 1.72
MRPL55-206ENST00000366732 P3H3Q8IVL6 736 aa25.75■■□□□ 1.71
MRPL55-206ENST00000366732 UACAQ9BZF9 1416 aa25.72■■□□□ 1.71
MRPL55-206ENST00000366732 ADCY10Q96PN6 1610 aa25.69■■□□□ 1.7
MRPL55-206ENST00000366732 UHRF1BP1LA0JNW5 1464 aa25.66■■□□□ 1.7
MRPL55-206ENST00000366732 SAMD9Q5K651 1589 aa25.66■■□□□ 1.7
MRPL55-206ENST00000366732 EFCAB5A4FU69 1503 aa25.63■■□□□ 1.69
MRPL55-206ENST00000366732 ABCC2Q92887 1545 aa25.63■■□□□ 1.69
MRPL55-206ENST00000366732 PLB1Q6P1J6 1458 aa25.59■■□□□ 1.69
MRPL55-206ENST00000366732 FHOD3Q2V2M9 1422 aa25.57■■□□□ 1.68
MRPL55-206ENST00000366732 MAPKBP1O60336 1514 aa25.56■■□□□ 1.68
MRPL55-206ENST00000366732 ABCA8O94911 1581 aa25.53■■□□□ 1.68
MRPL55-206ENST00000366732 KDM5BQ9UGL1 1544 aa25.53■■□□□ 1.68
MRPL55-206ENST00000366732 FAM69CQ0P6D2 419 aa25.49■■□□□ 1.67
MRPL55-206ENST00000366732 ARHGAP35Q9NRY4 1499 aa25.48■■□□□ 1.67
MRPL55-206ENST00000366732 ASXL2Q76L83 1435 aa25.46■■□□□ 1.67
MRPL55-206ENST00000366732 ABCC10Q5T3U5 1492 aa25.46■■□□□ 1.67
MRPL55-206ENST00000366732 FMN1Q68DA7 1419 aa25.46■■□□□ 1.67
MRPL55-206ENST00000366732 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.44■■□□□ 1.66
MRPL55-206ENST00000366732 HNRNPUL2Q1KMD3 747 aaKnown RBP25.44■■□□□ 1.66
MRPL55-206ENST00000366732 ZCCHC11Q5TAX3 1644 aaKnown RBP25.44■■□□□ 1.66
MRPL55-206ENST00000366732 RAPGEF6Q8TEU7 1601 aa25.44■■□□□ 1.66
MRPL55-206ENST00000366732 LOC105371045A0A1W2PR82 267 aa25.42■■□□□ 1.66
MRPL55-206ENST00000366732 ARID3CA6NKF2 412 aa25.42■■□□□ 1.66
MRPL55-206ENST00000366732 CLIP1P30622 1438 aa25.42■■□□□ 1.66
MRPL55-206ENST00000366732 ATP1B4Q9UN42 357 aaPredicted RBP25.39■■□□□ 1.66
MRPL55-206ENST00000366732 ATP10BO94823 1461 aa25.37■■□□□ 1.65
MRPL55-206ENST00000366732 DIP2BQ9P265 1576 aa25.35■■□□□ 1.65
MRPL55-206ENST00000366732 NUP153P49790 1475 aaKnown RBP25.34■■□□□ 1.65
MRPL55-206ENST00000366732 WDR7Q9Y4E6 1490 aa25.34■■□□□ 1.65
MRPL55-206ENST00000366732 KIF13AQ9H1H9 1805 aa25.33■■□□□ 1.65
MRPL55-206ENST00000366732 KCNH8Q96L42 1107 aa25.32■■□□□ 1.64
MRPL55-206ENST00000366732 PLEKHD1A6NEE1 506 aa25.3■■□□□ 1.64
MRPL55-206ENST00000366732 EPRSP07814 1512 aaKnown RBP25.3■■□□□ 1.64
MRPL55-206ENST00000366732 CEP162Q5TB80 1403 aa25.29■■□□□ 1.64
MRPL55-206ENST00000366732 GLI2P10070 1586 aa25.27■■□□□ 1.64
MRPL55-206ENST00000366732 HECW1Q76N89 1606 aa25.26■■□□□ 1.63
MRPL55-206ENST00000366732 CDK11AQ9UQ88 783 aaPredicted RBP25.25■■□□□ 1.63
MRPL55-206ENST00000366732 CASKIN1Q8WXD9 1431 aa25.22■■□□□ 1.63
MRPL55-206ENST00000366732 CDK13Q14004 1512 aaKnown RBP25.16■■□□□ 1.62
MRPL55-206ENST00000366732 CD109Q6YHK3 1445 aa25.15■■□□□ 1.62
MRPL55-206ENST00000366732 TSPOAP1O95153 1857 aa25.15■■□□□ 1.62
MRPL55-206ENST00000366732 FYCO1Q9BQS8 1478 aa25.15■■□□□ 1.62
MRPL55-206ENST00000366732 CCDC18Q5T9S5 1454 aa25.13■■□□□ 1.61
MRPL55-206ENST00000366732 PCF11O94913 1555 aaKnown RBP25.13■■□□□ 1.61
MRPL55-206ENST00000366732 TEX14Q8IWB6 1497 aa25.12■■□□□ 1.61
MRPL55-206ENST00000366732 MAP3K4Q9Y6R4 1608 aa25.12■■□□□ 1.61
MRPL55-206ENST00000366732 CFAP43Q8NDM7 1665 aa25.1■■□□□ 1.61
MRPL55-206ENST00000366732 MAGI3Q5TCQ9 1506 aa25.05■■□□□ 1.6
MRPL55-206ENST00000366732 ABCA9Q8IUA7 1624 aa25.04■■□□□ 1.6
MRPL55-206ENST00000366732 TROQ12816 1431 aaPredicted RBP25.03■■□□□ 1.6
MRPL55-206ENST00000366732 PPRC1Q5VV67 1664 aaKnown RBP25.01■■□□□ 1.59
MRPL55-206ENST00000366732 VPS8Q8N3P4 1428 aa25■■□□□ 1.59
MRPL55-206ENST00000366732 LRRIQ1Q96JM4 1722 aa24.99■■□□□ 1.59
MRPL55-206ENST00000366732 KDM6BO15054 1643 aa24.97■■□□□ 1.59
MRPL55-206ENST00000366732 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.96■■□□□ 1.59
MRPL55-206ENST00000366732 PHLDB1Q86UU1 1377 aa24.96■■□□□ 1.59
MRPL55-206ENST00000366732 KIF14Q15058 1648 aa24.94■■□□□ 1.58
MRPL55-206ENST00000366732 MTUS2Q5JR59 1369 aa24.93■■□□□ 1.58
MRPL55-206ENST00000366732 APLP2Q06481 763 aa24.9■■□□□ 1.58
MRPL55-206ENST00000366732 NEO1Q92859 1461 aa24.89■■□□□ 1.58
MRPL55-206ENST00000366732 TTC37Q6PGP7 1564 aa24.88■■□□□ 1.57
MRPL55-206ENST00000366732 PLCH2O75038 1416 aa24.88■■□□□ 1.57
MRPL55-206ENST00000366732 EFCAB2Q5VUJ9 269 aa24.87■■□□□ 1.57
MRPL55-206ENST00000366732 FANCAO15360 1455 aa24.85■■□□□ 1.57
MRPL55-206ENST00000366732 COL17A1Q9UMD9 1497 aaPredicted RBP24.83■■□□□ 1.57
MRPL55-206ENST00000366732 ARAP3Q8WWN8 1544 aa24.83■■□□□ 1.57
MRPL55-206ENST00000366732 AKNAQ7Z591 1439 aa24.82■■□□□ 1.56
MRPL55-206ENST00000366732 CFAP74Q9C0B2 1584 aa24.82■■□□□ 1.56
MRPL55-206ENST00000366732 MYO5CQ9NQX4 1742 aa24.8■■□□□ 1.56
MRPL55-206ENST00000366732 AEBP2Q6ZN18 517 aaPredicted RBP24.79■■□□□ 1.56
MRPL55-206ENST00000366732 EHBP1L1Q8N3D4 1523 aa24.79■■□□□ 1.56
MRPL55-206ENST00000366732 TIAM1Q13009 1591 aa24.79■■□□□ 1.56
MRPL55-206ENST00000366732 ARHGAP5Q13017 1502 aa24.77■■□□□ 1.56
MRPL55-206ENST00000366732 MAP3K1Q13233 1512 aa24.77■■□□□ 1.56
MRPL55-206ENST00000366732 CCNB3Q8WWL7 1395 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms