RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 RUSC2Q8N2Y8 1516 aa23.73■■□□□ 1.39
TNFRSF1A-202ENST00000366159 JPH4Q96JJ6 628 aa23.73■■□□□ 1.39
TNFRSF1A-202ENST00000366159 TRHP20396 242 aaPredicted RBP23.71■■□□□ 1.39
TNFRSF1A-202ENST00000366159 PRG4Q92954 1404 aaPredicted RBP23.7■■□□□ 1.38
TNFRSF1A-202ENST00000366159 KIAA0586Q9BVV6 1533 aa23.66■■□□□ 1.38
TNFRSF1A-202ENST00000366159 CARMIL1Q5VZK9 1371 aa23.65■■□□□ 1.38
TNFRSF1A-202ENST00000366159 RAPGEF2Q9Y4G8 1499 aa23.46■■□□□ 1.35
TNFRSF1A-202ENST00000366159 IQGAP2Q13576 1575 aa23.43■■□□□ 1.34
TNFRSF1A-202ENST00000366159 ADCY10Q96PN6 1610 aa23.43■■□□□ 1.34
TNFRSF1A-202ENST00000366159 CARMIL2Q6F5E8 1435 aa23.37■■□□□ 1.33
TNFRSF1A-202ENST00000366159 MAPKBP1O60336 1514 aa23.36■■□□□ 1.33
TNFRSF1A-202ENST00000366159 KIF13AQ9H1H9 1805 aa23.36■■□□□ 1.33
TNFRSF1A-202ENST00000366159 PTPRGP23470 1445 aa23.36■■□□□ 1.33
TNFRSF1A-202ENST00000366159 DISP1Q96F81 1524 aa23.36■■□□□ 1.33
TNFRSF1A-202ENST00000366159 TNIKQ9UKE5 1360 aa23.35■■□□□ 1.33
TNFRSF1A-202ENST00000366159 UGGT2Q9NYU1 1516 aa23.33■■□□□ 1.33
TNFRSF1A-202ENST00000366159 PRXQ9BXM0 1461 aa23.32■■□□□ 1.32
TNFRSF1A-202ENST00000366159 NPM1P06748 294 aaKnown RBP eCLIP23.32■■□□□ 1.32
TNFRSF1A-202ENST00000366159 ABCC10Q5T3U5 1492 aa23.31■■□□□ 1.32
TNFRSF1A-202ENST00000366159 UHRF1BP1LA0JNW5 1464 aa23.25■■□□□ 1.31
TNFRSF1A-202ENST00000366159 DIP2BQ9P265 1576 aa23.24■■□□□ 1.31
TNFRSF1A-202ENST00000366159 CTTNBP2Q8WZ74 1663 aa23.23■■□□□ 1.31
TNFRSF1A-202ENST00000366159 ABCC2Q92887 1545 aa23.23■■□□□ 1.31
TNFRSF1A-202ENST00000366159 KIAA0556O60303 1618 aa23.22■■□□□ 1.31
TNFRSF1A-202ENST00000366159 FAM69CQ0P6D2 419 aa23.22■■□□□ 1.31
TNFRSF1A-202ENST00000366159 UACAQ9BZF9 1416 aa23.2■■□□□ 1.31
TNFRSF1A-202ENST00000366159 TTBK1Q5TCY1 1321 aaPredicted RBP23.2■■□□□ 1.3
TNFRSF1A-202ENST00000366159 CSRNP3Q8WYN3 585 aa23.15■■□□□ 1.3
TNFRSF1A-202ENST00000366159 KDM5BQ9UGL1 1544 aa23.13■■□□□ 1.29
TNFRSF1A-202ENST00000366159 GOLGA3Q08378 1498 aa23.12■■□□□ 1.29
TNFRSF1A-202ENST00000366159 ASXL2Q76L83 1435 aa23.11■■□□□ 1.29
TNFRSF1A-202ENST00000366159 EEA1Q15075 1411 aa23.1■■□□□ 1.29
TNFRSF1A-202ENST00000366159 PLB1Q6P1J6 1458 aa23.1■■□□□ 1.29
TNFRSF1A-202ENST00000366159 GLI2P10070 1586 aa23.06■■□□□ 1.28
TNFRSF1A-202ENST00000366159 ZCCHC11Q5TAX3 1644 aaKnown RBP23.04■■□□□ 1.28
TNFRSF1A-202ENST00000366159 ABCA8O94911 1581 aa23.03■■□□□ 1.28
TNFRSF1A-202ENST00000366159 TSPOAP1O95153 1857 aa22.99■■□□□ 1.27
TNFRSF1A-202ENST00000366159 EPRSP07814 1512 aaKnown RBP22.99■■□□□ 1.27
TNFRSF1A-202ENST00000366159 PPRC1Q5VV67 1664 aaKnown RBP22.98■■□□□ 1.27
TNFRSF1A-202ENST00000366159 SAMD9Q5K651 1589 aa22.96■■□□□ 1.27
TNFRSF1A-202ENST00000366159 KDM6BO15054 1643 aa22.94■■□□□ 1.26
TNFRSF1A-202ENST00000366159 MAP3K4Q9Y6R4 1608 aa22.93■■□□□ 1.26
TNFRSF1A-202ENST00000366159 WDR7Q9Y4E6 1490 aa22.92■■□□□ 1.26
TNFRSF1A-202ENST00000366159 KIF21BO75037 1637 aa22.91■■□□□ 1.26
TNFRSF1A-202ENST00000366159 FAM9AQ8IZU1 332 aaPredicted RBP22.9■■□□□ 1.26
TNFRSF1A-202ENST00000366159 P3H3Q8IVL6 736 aa22.89■■□□□ 1.26
TNFRSF1A-202ENST00000366159 ATP10BO94823 1461 aa22.84■■□□□ 1.25
TNFRSF1A-202ENST00000366159 COL17A1Q9UMD9 1497 aaPredicted RBP22.82■■□□□ 1.24
TNFRSF1A-202ENST00000366159 TEX14Q8IWB6 1497 aa22.8■■□□□ 1.24
TNFRSF1A-202ENST00000366159 RAPGEF6Q8TEU7 1601 aa22.79■■□□□ 1.24
TNFRSF1A-202ENST00000366159 CFAP43Q8NDM7 1665 aa22.77■■□□□ 1.24
TNFRSF1A-202ENST00000366159 MAGI3Q5TCQ9 1506 aa22.77■■□□□ 1.24
TNFRSF1A-202ENST00000366159 FHOD3Q2V2M9 1422 aa22.76■■□□□ 1.23
TNFRSF1A-202ENST00000366159 KCNH8Q96L42 1107 aa22.76■■□□□ 1.23
TNFRSF1A-202ENST00000366159 CD109Q6YHK3 1445 aa22.75■■□□□ 1.23
TNFRSF1A-202ENST00000366159 EFCAB5A4FU69 1503 aa22.74■■□□□ 1.23
TNFRSF1A-202ENST00000366159 NUP153P49790 1475 aaKnown RBP22.74■■□□□ 1.23
TNFRSF1A-202ENST00000366159 RANGAP1P46060 587 aaPredicted RBP22.73■■□□□ 1.23
TNFRSF1A-202ENST00000366159 ARID3CA6NKF2 412 aa22.72■■□□□ 1.23
TNFRSF1A-202ENST00000366159 KDM4FA0A1W2PPD8 638 aa22.67■■□□□ 1.22
TNFRSF1A-202ENST00000366159 ABCA9Q8IUA7 1624 aa22.67■■□□□ 1.22
TNFRSF1A-202ENST00000366159 UBTFP17480 764 aaKnown RBP22.64■■□□□ 1.22
TNFRSF1A-202ENST00000366159 EHMT2Q96KQ7 1210 aa22.6■■□□□ 1.21
TNFRSF1A-202ENST00000366159 ARHGAP35Q9NRY4 1499 aa22.6■■□□□ 1.21
TNFRSF1A-202ENST00000366159 ARAP3Q8WWN8 1544 aa22.59■■□□□ 1.21
TNFRSF1A-202ENST00000366159 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.57■■□□□ 1.2
TNFRSF1A-202ENST00000366159 HNRNPUL2Q1KMD3 747 aaKnown RBP22.57■■□□□ 1.2
TNFRSF1A-202ENST00000366159 PHLDB1Q86UU1 1377 aa22.55■■□□□ 1.2
TNFRSF1A-202ENST00000366159 PLEKHD1A6NEE1 506 aa22.55■■□□□ 1.2
TNFRSF1A-202ENST00000366159 FMN1Q68DA7 1419 aa22.53■■□□□ 1.2
TNFRSF1A-202ENST00000366159 NEO1Q92859 1461 aa22.52■■□□□ 1.2
TNFRSF1A-202ENST00000366159 CDK13Q14004 1512 aaKnown RBP22.5■■□□□ 1.19
TNFRSF1A-202ENST00000366159 ADGRL1O94910 1474 aa22.49■■□□□ 1.19
TNFRSF1A-202ENST00000366159 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.49■■□□□ 1.19
TNFRSF1A-202ENST00000366159 HECW1Q76N89 1606 aa22.46■■□□□ 1.19
TNFRSF1A-202ENST00000366159 TTC37Q6PGP7 1564 aa22.43■■□□□ 1.18
TNFRSF1A-202ENST00000366159 RAPGEF3O95398 923 aa22.41■■□□□ 1.18
TNFRSF1A-202ENST00000366159 FRMPD1Q5SYB0 1578 aa22.41■■□□□ 1.18
TNFRSF1A-202ENST00000366159 LRRIQ1Q96JM4 1722 aa22.39■■□□□ 1.17
TNFRSF1A-202ENST00000366159 AKNAQ7Z591 1439 aa22.38■■□□□ 1.17
TNFRSF1A-202ENST00000366159 FANCAO15360 1455 aa22.38■■□□□ 1.17
TNFRSF1A-202ENST00000366159 ATP1B4Q9UN42 357 aaPredicted RBP22.36■■□□□ 1.17
TNFRSF1A-202ENST00000366159 PLCH2O75038 1416 aa22.35■■□□□ 1.17
TNFRSF1A-202ENST00000366159 CFAP74Q9C0B2 1584 aa22.35■■□□□ 1.17
TNFRSF1A-202ENST00000366159 CDK11AQ9UQ88 783 aaPredicted RBP22.34■■□□□ 1.17
TNFRSF1A-202ENST00000366159 CASKIN1Q8WXD9 1431 aa22.34■■□□□ 1.17
TNFRSF1A-202ENST00000366159 RICTORQ6R327 1708 aa22.33■■□□□ 1.17
TNFRSF1A-202ENST00000366159 DENND4BO75064 1496 aaPredicted RBP22.33■■□□□ 1.16
TNFRSF1A-202ENST00000366159 TROQ12816 1431 aaPredicted RBP22.33■■□□□ 1.16
TNFRSF1A-202ENST00000366159 PCF11O94913 1555 aaKnown RBP22.31■■□□□ 1.16
TNFRSF1A-202ENST00000366159 KIF14Q15058 1648 aa22.3■■□□□ 1.16
TNFRSF1A-202ENST00000366159 CLIP1P30622 1438 aa22.28■■□□□ 1.16
TNFRSF1A-202ENST00000366159 MYO5CQ9NQX4 1742 aa22.26■■□□□ 1.15
TNFRSF1A-202ENST00000366159 ZMYM4Q5VZL5 1548 aa22.26■■□□□ 1.15
TNFRSF1A-202ENST00000366159 CCDC18Q5T9S5 1454 aa22.26■■□□□ 1.15
TNFRSF1A-202ENST00000366159 FYCO1Q9BQS8 1478 aa22.24■■□□□ 1.15
TNFRSF1A-202ENST00000366159 ARHGEF40Q8TER5 1519 aa22.24■■□□□ 1.15
TNFRSF1A-202ENST00000366159 ADAMTSL3P82987 1691 aa22.23■■□□□ 1.15
TNFRSF1A-202ENST00000366159 SCAPERQ9BY12 1400 aa22.22■■□□□ 1.15
TNFRSF1A-202ENST00000366159 EFCAB2Q5VUJ9 269 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms