RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 KIF21BO75037 1637 aa33.85■■■■□ 3.01
SHISA4-201ENST00000362011 CEP170Q5SW79 1584 aa33.84■■■■□ 3.01
SHISA4-201ENST00000362011 IGF1RP08069 1367 aa33.81■■■■□ 3
SHISA4-201ENST00000362011 FHAD1B1AJZ9 1412 aa33.8■■■■□ 3
SHISA4-201ENST00000362011 SHROOM2Q13796 1616 aa33.77■■■■□ 3
SHISA4-201ENST00000362011 PRXQ9BXM0 1461 aa33.73■■■□□ 2.99
SHISA4-201ENST00000362011 CARMIL1Q5VZK9 1371 aa33.67■■■□□ 2.98
SHISA4-201ENST00000362011 GOLGA3Q08378 1498 aa33.65■■■□□ 2.98
SHISA4-201ENST00000362011 RAPGEF2Q9Y4G8 1499 aa33.62■■■□□ 2.97
SHISA4-201ENST00000362011 LOC105371045A0A1W2PR82 267 aa33.57■■■□□ 2.97
SHISA4-201ENST00000362011 EHMT2Q96KQ7 1210 aa33.54■■■□□ 2.96
SHISA4-201ENST00000362011 PRG4Q92954 1404 aaPredicted RBP33.52■■■□□ 2.96
SHISA4-201ENST00000362011 JPH4Q96JJ6 628 aa33.5■■■□□ 2.95
SHISA4-201ENST00000362011 CTTNBP2Q8WZ74 1663 aa33.49■■■□□ 2.95
SHISA4-201ENST00000362011 AEBP2Q6ZN18 517 aaPredicted RBP33.47■■■□□ 2.95
SHISA4-201ENST00000362011 UBTFP17480 764 aaKnown RBP33.4■■■□□ 2.94
SHISA4-201ENST00000362011 KIF13AQ9H1H9 1805 aa33.4■■■□□ 2.94
SHISA4-201ENST00000362011 TNIKQ9UKE5 1360 aa33.37■■■□□ 2.93
SHISA4-201ENST00000362011 ABCC10Q5T3U5 1492 aa33.26■■■□□ 2.92
SHISA4-201ENST00000362011 MAPKBP1O60336 1514 aa33.26■■■□□ 2.91
SHISA4-201ENST00000362011 KIAA0586Q9BVV6 1533 aa33.25■■■□□ 2.91
SHISA4-201ENST00000362011 ADCY10Q96PN6 1610 aa33.2■■■□□ 2.9
SHISA4-201ENST00000362011 IQGAP2Q13576 1575 aa33.17■■■□□ 2.9
SHISA4-201ENST00000362011 NPM1P06748 294 aaKnown RBP eCLIP33.16■■■□□ 2.9
SHISA4-201ENST00000362011 FAM69CQ0P6D2 419 aa33.16■■■□□ 2.9
SHISA4-201ENST00000362011 CEP162Q5TB80 1403 aa33.14■■■□□ 2.9
SHISA4-201ENST00000362011 DIP2BQ9P265 1576 aa33.14■■■□□ 2.9
SHISA4-201ENST00000362011 CLIP1P30622 1438 aa33.04■■■□□ 2.88
SHISA4-201ENST00000362011 EFCAB5A4FU69 1503 aa32.99■■■□□ 2.87
SHISA4-201ENST00000362011 RANGAP1P46060 587 aaPredicted RBP32.98■■■□□ 2.87
SHISA4-201ENST00000362011 UGGT2Q9NYU1 1516 aa32.97■■■□□ 2.87
SHISA4-201ENST00000362011 SAMD9Q5K651 1589 aa32.97■■■□□ 2.87
SHISA4-201ENST00000362011 PTPRGP23470 1445 aa32.95■■■□□ 2.87
SHISA4-201ENST00000362011 ARHGAP35Q9NRY4 1499 aa32.92■■■□□ 2.86
SHISA4-201ENST00000362011 KDM6BO15054 1643 aa32.88■■■□□ 2.85
SHISA4-201ENST00000362011 CARMIL2Q6F5E8 1435 aa32.87■■■□□ 2.85
SHISA4-201ENST00000362011 ABCC2Q92887 1545 aa32.86■■■□□ 2.85
SHISA4-201ENST00000362011 KIAA0556O60303 1618 aa32.84■■■□□ 2.85
SHISA4-201ENST00000362011 UHRF1BP1LA0JNW5 1464 aa32.81■■■□□ 2.84
SHISA4-201ENST00000362011 DISP1Q96F81 1524 aa32.78■■■□□ 2.84
SHISA4-201ENST00000362011 TSPOAP1O95153 1857 aa32.78■■■□□ 2.84
SHISA4-201ENST00000362011 GLI2P10070 1586 aa32.76■■■□□ 2.84
SHISA4-201ENST00000362011 PLB1Q6P1J6 1458 aa32.76■■■□□ 2.83
SHISA4-201ENST00000362011 KDM4FA0A1W2PPD8 638 aa32.75■■■□□ 2.83
SHISA4-201ENST00000362011 ASXL2Q76L83 1435 aa32.74■■■□□ 2.83
SHISA4-201ENST00000362011 FHOD3Q2V2M9 1422 aa32.73■■■□□ 2.83
SHISA4-201ENST00000362011 UACAQ9BZF9 1416 aa32.72■■■□□ 2.83
SHISA4-201ENST00000362011 P3H3Q8IVL6 736 aa32.71■■■□□ 2.83
SHISA4-201ENST00000362011 PPRC1Q5VV67 1664 aaKnown RBP32.69■■■□□ 2.82
SHISA4-201ENST00000362011 TTBK1Q5TCY1 1321 aaPredicted RBP32.68■■■□□ 2.82
SHISA4-201ENST00000362011 VPS8Q8N3P4 1428 aa32.67■■■□□ 2.82
SHISA4-201ENST00000362011 KDM5BQ9UGL1 1544 aa32.66■■■□□ 2.82
SHISA4-201ENST00000362011 FMN1Q68DA7 1419 aa32.6■■■□□ 2.81
SHISA4-201ENST00000362011 EPRSP07814 1512 aaKnown RBP32.57■■■□□ 2.81
SHISA4-201ENST00000362011 PCF11O94913 1555 aaKnown RBP32.57■■■□□ 2.8
SHISA4-201ENST00000362011 MAP3K4Q9Y6R4 1608 aa32.53■■■□□ 2.8
SHISA4-201ENST00000362011 COL17A1Q9UMD9 1497 aaPredicted RBP32.51■■■□□ 2.8
SHISA4-201ENST00000362011 ZCCHC11Q5TAX3 1644 aaKnown RBP32.5■■■□□ 2.79
SHISA4-201ENST00000362011 RAPGEF6Q8TEU7 1601 aa32.48■■■□□ 2.79
SHISA4-201ENST00000362011 FYCO1Q9BQS8 1478 aa32.47■■■□□ 2.79
SHISA4-201ENST00000362011 HECW1Q76N89 1606 aa32.45■■■□□ 2.79
SHISA4-201ENST00000362011 CASKIN1Q8WXD9 1431 aa32.45■■■□□ 2.79
SHISA4-201ENST00000362011 LRRIQ1Q96JM4 1722 aa32.45■■■□□ 2.78
SHISA4-201ENST00000362011 TEX14Q8IWB6 1497 aa32.43■■■□□ 2.78
SHISA4-201ENST00000362011 ABCA8O94911 1581 aa32.39■■■□□ 2.78
SHISA4-201ENST00000362011 CFAP43Q8NDM7 1665 aa32.38■■■□□ 2.77
SHISA4-201ENST00000362011 WDR7Q9Y4E6 1490 aa32.38■■■□□ 2.77
SHISA4-201ENST00000362011 ADGRL1O94910 1474 aa32.37■■■□□ 2.77
SHISA4-201ENST00000362011 TIAM1Q13009 1591 aa32.3■■■□□ 2.76
SHISA4-201ENST00000362011 ATP1B4Q9UN42 357 aaPredicted RBP32.29■■■□□ 2.76
SHISA4-201ENST00000362011 MAP3K1Q13233 1512 aa32.29■■■□□ 2.76
SHISA4-201ENST00000362011 APLP2Q06481 763 aa32.28■■■□□ 2.76
SHISA4-201ENST00000362011 CCDC18Q5T9S5 1454 aa32.27■■■□□ 2.76
SHISA4-201ENST00000362011 MAGI3Q5TCQ9 1506 aa32.26■■■□□ 2.76
SHISA4-201ENST00000362011 NUP153P49790 1475 aaKnown RBP32.25■■■□□ 2.75
SHISA4-201ENST00000362011 CD109Q6YHK3 1445 aa32.21■■■□□ 2.75
SHISA4-201ENST00000362011 CDK13Q14004 1512 aaKnown RBP32.17■■■□□ 2.74
SHISA4-201ENST00000362011 KCNH8Q96L42 1107 aa32.11■■■□□ 2.73
SHISA4-201ENST00000362011 LRRC9Q6ZRR7 1453 aa32.07■■■□□ 2.73
SHISA4-201ENST00000362011 ATP10BO94823 1461 aa32.07■■■□□ 2.72
SHISA4-201ENST00000362011 ARID3CA6NKF2 412 aa32.05■■■□□ 2.72
SHISA4-201ENST00000362011 EHBP1L1Q8N3D4 1523 aa32.05■■■□□ 2.72
SHISA4-201ENST00000362011 PPARGC1BQ86YN6 1023 aaKnown RBP32.03■■■□□ 2.72
SHISA4-201ENST00000362011 ARAP3Q8WWN8 1544 aa32.03■■■□□ 2.72
SHISA4-201ENST00000362011 HECW2Q9P2P5 1572 aa32.02■■■□□ 2.72
SHISA4-201ENST00000362011 KANK4Q5T7N3 995 aaPredicted RBP32■■■□□ 2.71
SHISA4-201ENST00000362011 ILDR1Q86SU0 546 aaPredicted RBP32■■■□□ 2.71
SHISA4-201ENST00000362011 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32■■■□□ 2.71
SHISA4-201ENST00000362011 HNRNPUL2Q1KMD3 747 aaKnown RBP32■■■□□ 2.71
SHISA4-201ENST00000362011 SUPT6HQ7KZ85 1726 aaKnown RBP31.99■■■□□ 2.71
SHISA4-201ENST00000362011 MTUS2Q5JR59 1369 aa31.98■■■□□ 2.71
SHISA4-201ENST00000362011 CDK11AQ9UQ88 783 aaPredicted RBP31.95■■■□□ 2.7
SHISA4-201ENST00000362011 ABCA9Q8IUA7 1624 aa31.94■■■□□ 2.7
SHISA4-201ENST00000362011 PHLDB1Q86UU1 1377 aa31.93■■■□□ 2.7
SHISA4-201ENST00000362011 TROQ12816 1431 aaPredicted RBP31.89■■■□□ 2.7
SHISA4-201ENST00000362011 KIF14Q15058 1648 aa31.85■■■□□ 2.69
SHISA4-201ENST00000362011 PLEKHD1A6NEE1 506 aa31.84■■■□□ 2.69
SHISA4-201ENST00000362011 NEO1Q92859 1461 aa31.82■■■□□ 2.68
SHISA4-201ENST00000362011 NCOA2Q15596 1464 aa31.8■■■□□ 2.68
SHISA4-201ENST00000362011 ITSN2Q9NZM3 1697 aa31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms