RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 CLIP1P30622 1438 aa28.76■■■□□ 2.19
CCDC7-203ENST00000362006 CHD1O14646 1710 aa28.69■■■□□ 2.18
CCDC7-203ENST00000362006 KIAA0586Q9BVV6 1533 aa28.68■■■□□ 2.18
CCDC7-203ENST00000362006 NUP160Q12769 1436 aa28.68■■■□□ 2.18
CCDC7-203ENST00000362006 IQGAP2Q13576 1575 aa28.66■■■□□ 2.18
CCDC7-203ENST00000362006 CEP170Q5SW79 1584 aa28.65■■■□□ 2.18
CCDC7-203ENST00000362006 RANGAP1P46060 587 aaPredicted RBP28.64■■■□□ 2.18
CCDC7-203ENST00000362006 EFCAB5A4FU69 1503 aa28.6■■■□□ 2.17
CCDC7-203ENST00000362006 ARHGAP35Q9NRY4 1499 aa28.58■■■□□ 2.17
CCDC7-203ENST00000362006 UGGT2Q9NYU1 1516 aa28.53■■■□□ 2.16
CCDC7-203ENST00000362006 SAMD9Q5K651 1589 aa28.51■■■□□ 2.15
CCDC7-203ENST00000362006 ARAP1Q96P48 1450 aa28.49■■■□□ 2.15
CCDC7-203ENST00000362006 VPS8Q8N3P4 1428 aa28.46■■■□□ 2.15
CCDC7-203ENST00000362006 JPH4Q96JJ6 628 aa28.44■■■□□ 2.14
CCDC7-203ENST00000362006 CLASP1Q7Z460 1538 aa28.39■■■□□ 2.13
CCDC7-203ENST00000362006 P3H3Q8IVL6 736 aa28.39■■■□□ 2.13
CCDC7-203ENST00000362006 CARMIL2Q6F5E8 1435 aa28.37■■■□□ 2.13
CCDC7-203ENST00000362006 FHOD3Q2V2M9 1422 aa28.37■■■□□ 2.13
CCDC7-203ENST00000362006 DISP1Q96F81 1524 aa28.36■■■□□ 2.13
CCDC7-203ENST00000362006 KIAA0556O60303 1618 aa28.35■■■□□ 2.13
CCDC7-203ENST00000362006 SHROOM2Q13796 1616 aa28.35■■■□□ 2.13
CCDC7-203ENST00000362006 OSCARQ8IYS5 282 aa28.34■■■□□ 2.13
CCDC7-203ENST00000362006 FMN1Q68DA7 1419 aa28.34■■■□□ 2.13
CCDC7-203ENST00000362006 PRG4Q92954 1404 aaPredicted RBP28.28■■■□□ 2.12
CCDC7-203ENST00000362006 APLP2Q06481 763 aa28.22■■■□□ 2.11
CCDC7-203ENST00000362006 CASKIN1Q8WXD9 1431 aa28.21■■■□□ 2.11
CCDC7-203ENST00000362006 FYCO1Q9BQS8 1478 aa28.19■■■□□ 2.1
CCDC7-203ENST00000362006 PCF11O94913 1555 aaKnown RBP28.17■■■□□ 2.1
CCDC7-203ENST00000362006 MAP3K1Q13233 1512 aa28.11■■■□□ 2.09
CCDC7-203ENST00000362006 PTPRGP23470 1445 aa28.09■■■□□ 2.09
CCDC7-203ENST00000362006 HECW1Q76N89 1606 aa28.07■■■□□ 2.08
CCDC7-203ENST00000362006 ATP1B4Q9UN42 357 aaPredicted RBP28.06■■■□□ 2.08
CCDC7-203ENST00000362006 ERCC6L2Q5T890 1561 aa28.05■■■□□ 2.08
CCDC7-203ENST00000362006 RAPGEF6Q8TEU7 1601 aa28.04■■■□□ 2.08
CCDC7-203ENST00000362006 TTBK1Q5TCY1 1321 aaPredicted RBP28.04■■■□□ 2.08
CCDC7-203ENST00000362006 TIAM1Q13009 1591 aa28.02■■■□□ 2.08
CCDC7-203ENST00000362006 CCDC18Q5T9S5 1454 aa28■■■□□ 2.07
CCDC7-203ENST00000362006 CFAP43Q8NDM7 1665 aa28■■■□□ 2.07
CCDC7-203ENST00000362006 ABCA8O94911 1581 aa27.99■■■□□ 2.07
CCDC7-203ENST00000362006 PLB1Q6P1J6 1458 aa27.97■■■□□ 2.07
CCDC7-203ENST00000362006 EPRSP07814 1512 aaKnown RBP27.94■■■□□ 2.06
CCDC7-203ENST00000362006 PPARGC1BQ86YN6 1023 aaKnown RBP27.94■■■□□ 2.06
CCDC7-203ENST00000362006 LRRIQ1Q96JM4 1722 aa27.93■■■□□ 2.06
CCDC7-203ENST00000362006 NUP153P49790 1475 aaKnown RBP27.93■■■□□ 2.06
CCDC7-203ENST00000362006 UACAQ9BZF9 1416 aa27.92■■■□□ 2.06
CCDC7-203ENST00000362006 LRRC9Q6ZRR7 1453 aa27.89■■■□□ 2.06
CCDC7-203ENST00000362006 KANK4Q5T7N3 995 aaPredicted RBP27.88■■■□□ 2.05
CCDC7-203ENST00000362006 UHRF1BP1LA0JNW5 1464 aa27.85■■■□□ 2.05
CCDC7-203ENST00000362006 ABCC2Q92887 1545 aa27.84■■■□□ 2.05
CCDC7-203ENST00000362006 CDK11AQ9UQ88 783 aaPredicted RBP27.82■■■□□ 2.04
CCDC7-203ENST00000362006 ARHGEF11O15085 1522 aa27.82■■■□□ 2.04
CCDC7-203ENST00000362006 CDK13Q14004 1512 aaKnown RBP27.82■■■□□ 2.04
CCDC7-203ENST00000362006 MTUS2Q5JR59 1369 aa27.81■■■□□ 2.04
CCDC7-203ENST00000362006 TRIM26Q12899 539 aaPredicted RBP27.8■■■□□ 2.04
CCDC7-203ENST00000362006 EHBP1L1Q8N3D4 1523 aa27.78■■■□□ 2.04
CCDC7-203ENST00000362006 ATP10BO94823 1461 aa27.77■■■□□ 2.04
CCDC7-203ENST00000362006 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.77■■■□□ 2.04
CCDC7-203ENST00000362006 HNRNPUL2Q1KMD3 747 aaKnown RBP27.77■■■□□ 2.04
CCDC7-203ENST00000362006 ARID3CA6NKF2 412 aa27.76■■■□□ 2.03
CCDC7-203ENST00000362006 RIMBP3CA6NJZ7 1639 aa27.71■■■□□ 2.03
CCDC7-203ENST00000362006 RIMBP3BA6NNM3 1639 aa27.71■■■□□ 2.03
CCDC7-203ENST00000362006 RIMBP3Q9UFD9 1639 aa27.71■■■□□ 2.03
CCDC7-203ENST00000362006 MAGI3Q5TCQ9 1506 aa27.7■■■□□ 2.02
CCDC7-203ENST00000362006 KDM5BQ9UGL1 1544 aa27.7■■■□□ 2.02
CCDC7-203ENST00000362006 SUPT6HQ7KZ85 1726 aaKnown RBP27.69■■■□□ 2.02
CCDC7-203ENST00000362006 PLEKHD1A6NEE1 506 aa27.68■■■□□ 2.02
CCDC7-203ENST00000362006 ADCY10Q96PN6 1610 aa27.68■■■□□ 2.02
CCDC7-203ENST00000362006 TROQ12816 1431 aaPredicted RBP27.66■■■□□ 2.02
CCDC7-203ENST00000362006 ZCCHC11Q5TAX3 1644 aaKnown RBP27.63■■■□□ 2.01
CCDC7-203ENST00000362006 NCOA2Q15596 1464 aa27.61■■■□□ 2.01
CCDC7-203ENST00000362006 NPM1P06748 294 aaKnown RBP eCLIP27.56■■■□□ 2
CCDC7-203ENST00000362006 PCGF6Q9BYE7 350 aa27.56■■■□□ 2
CCDC7-203ENST00000362006 PHLDB1Q86UU1 1377 aa27.56■■■□□ 2
CCDC7-203ENST00000362006 RRBP1Q9P2E9 1410 aaKnown RBP27.55■■■□□ 2
CCDC7-203ENST00000362006 CYB5RLQ6IPT4 315 aa27.53■■■□□ 2
CCDC7-203ENST00000362006 KIF14Q15058 1648 aa27.53■■■□□ 2
CCDC7-203ENST00000362006 MYOM3Q5VTT5 1437 aa27.5■■□□□ 1.99
CCDC7-203ENST00000362006 CCNB3Q8WWL7 1395 aa27.48■■□□□ 1.99
CCDC7-203ENST00000362006 FGD6Q6ZV73 1430 aa27.44■■□□□ 1.98
CCDC7-203ENST00000362006 MIA2Q96PC5 1412 aa27.43■■□□□ 1.98
CCDC7-203ENST00000362006 WDR7Q9Y4E6 1490 aa27.43■■□□□ 1.98
CCDC7-203ENST00000362006 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.42■■□□□ 1.98
CCDC7-203ENST00000362006 ABCC10Q5T3U5 1492 aa27.42■■□□□ 1.98
CCDC7-203ENST00000362006 ITSN2Q9NZM3 1697 aa27.41■■□□□ 1.98
CCDC7-203ENST00000362006 ASXL2Q76L83 1435 aa27.4■■□□□ 1.98
CCDC7-203ENST00000362006 KCNH8Q96L42 1107 aa27.37■■□□□ 1.97
CCDC7-203ENST00000362006 GPATCH8Q9UKJ3 1502 aaKnown RBP27.36■■□□□ 1.97
CCDC7-203ENST00000362006 MAPKBP1O60336 1514 aa27.34■■□□□ 1.97
CCDC7-203ENST00000362006 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.34■■□□□ 1.97
CCDC7-203ENST00000362006 PTPN23Q9H3S7 1636 aa27.34■■□□□ 1.97
CCDC7-203ENST00000362006 TCOF1Q13428 1488 aaKnown RBP27.33■■□□□ 1.97
CCDC7-203ENST00000362006 CDC42BPAQ5VT25 1732 aa27.33■■□□□ 1.97
CCDC7-203ENST00000362006 FAM50AQ14320 339 aaKnown RBP27.32■■□□□ 1.96
CCDC7-203ENST00000362006 CFDP1Q9UEE9 299 aaPredicted RBP27.31■■□□□ 1.96
CCDC7-203ENST00000362006 TTC37Q6PGP7 1564 aa27.29■■□□□ 1.96
CCDC7-203ENST00000362006 MYO5CQ9NQX4 1742 aa27.27■■□□□ 1.96
CCDC7-203ENST00000362006 PREX2Q70Z35 1606 aa27.27■■□□□ 1.96
CCDC7-203ENST00000362006 ABCA9Q8IUA7 1624 aa27.26■■□□□ 1.95
CCDC7-203ENST00000362006 DNAJC5Q9H3Z4 198 aa27.25■■□□□ 1.95
CCDC7-203ENST00000362006 CDC42BPBQ9Y5S2 1711 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms