RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 NISCHQ9Y2I1 1504 aa41.75■■■■■ 4.27
CCDC7-203ENST00000362006 CCDC180Q9P1Z9 1646 aa36.68■■■■□ 3.46
CCDC7-203ENST00000362006 ZCCHC6Q5VYS8 1495 aaKnown RBP34.98■■■■□ 3.19
CCDC7-203ENST00000362006 ABCC9O60706 1549 aa34.88■■■■□ 3.17
CCDC7-203ENST00000362006 DCAF1Q9Y4B6 1507 aa34.62■■■■□ 3.13
CCDC7-203ENST00000362006 DCAF8L2P0C7V8 631 aa34.49■■■■□ 3.11
CCDC7-203ENST00000362006 MYO15BQ96JP2 1530 aa34.4■■■■□ 3.1
CCDC7-203ENST00000362006 NACADO15069 1562 aa34.26■■■■□ 3.07
CCDC7-203ENST00000362006 RB1CC1Q8TDY2 1594 aa34.05■■■■□ 3.04
CCDC7-203ENST00000362006 SHROOM4Q9ULL8 1493 aa33.57■■■□□ 2.96
CCDC7-203ENST00000362006 SCRIBQ14160 1630 aa33.51■■■□□ 2.96
CCDC7-203ENST00000362006 UNC13AQ9UPW8 1703 aa33.25■■■□□ 2.91
CCDC7-203ENST00000362006 BICRAQ9NZM4 1560 aa32.93■■■□□ 2.86
CCDC7-203ENST00000362006 PABPN1Q86U42 306 aaKnown RBP eCLIP32.77■■■□□ 2.84
CCDC7-203ENST00000362006 CECR2Q9BXF3 1484 aa32.37■■■□□ 2.77
CCDC7-203ENST00000362006 BAZ1AQ9NRL2 1556 aaPredicted RBP32.3■■■□□ 2.76
CCDC7-203ENST00000362006 RSF1Q96T23 1441 aaPredicted RBP32.18■■■□□ 2.74
CCDC7-203ENST00000362006 SMARCA4P51532 1647 aa32.17■■■□□ 2.74
CCDC7-203ENST00000362006 MROH2BQ7Z745 1585 aa32.17■■■□□ 2.74
CCDC7-203ENST00000362006 SUPT5HO00267 1087 aaKnown RBP32.15■■■□□ 2.74
CCDC7-203ENST00000362006 EIF4G1Q04637 1599 aaKnown RBP32■■■□□ 2.71
CCDC7-203ENST00000362006 WIZO95785 1651 aa31.88■■■□□ 2.69
CCDC7-203ENST00000362006 PEG3Q9GZU2 1588 aa31.86■■■□□ 2.69
CCDC7-203ENST00000362006 SMARCA2P51531 1590 aa31.79■■■□□ 2.68
CCDC7-203ENST00000362006 ATAD2BQ9ULI0 1458 aa31.74■■■□□ 2.67
CCDC7-203ENST00000362006 TOP2AP11388 1531 aaKnown RBP31.62■■■□□ 2.65
CCDC7-203ENST00000362006 CC2D2AQ9P2K1 1620 aa31.61■■■□□ 2.65
CCDC7-203ENST00000362006 NCAPD3P42695 1498 aa31.59■■■□□ 2.65
CCDC7-203ENST00000362006 BAZ1BQ9UIG0 1483 aaKnown RBP31.55■■■□□ 2.64
CCDC7-203ENST00000362006 HMGXB3Q12766 1538 aa31.52■■■□□ 2.64
CCDC7-203ENST00000362006 CCDC88BA6NC98 1476 aa31.24■■■□□ 2.59
CCDC7-203ENST00000362006 DNAJC5BQ9UF47 199 aa31.07■■■□□ 2.56
CCDC7-203ENST00000362006 CFTRP13569 1480 aa30.75■■■□□ 2.51
CCDC7-203ENST00000362006 CADPSQ9ULU8 1353 aa30.73■■■□□ 2.51
CCDC7-203ENST00000362006 PRDM2Q13029 1718 aa30.62■■■□□ 2.49
CCDC7-203ENST00000362006 CHIC1Q5VXU3 224 aa30.61■■■□□ 2.49
CCDC7-203ENST00000362006 LAMC3Q9Y6N6 1575 aa30.6■■■□□ 2.49
CCDC7-203ENST00000362006 NESP48681 1621 aa30.47■■■□□ 2.47
CCDC7-203ENST00000362006 PDS5BQ9NTI5 1447 aa30.38■■■□□ 2.45
CCDC7-203ENST00000362006 ABCC8Q09428 1581 aa30.38■■■□□ 2.45
CCDC7-203ENST00000362006 FANCD2Q9BXW9 1451 aa30.36■■■□□ 2.45
CCDC7-203ENST00000362006 TRIM41Q8WV44 630 aa30.35■■■□□ 2.45
CCDC7-203ENST00000362006 WRNQ14191 1432 aaPredicted RBP eCLIP30.34■■■□□ 2.45
CCDC7-203ENST00000362006 CEP164Q9UPV0 1460 aa30.23■■■□□ 2.43
CCDC7-203ENST00000362006 SYNJ1O43426 1573 aa30.17■■■□□ 2.42
CCDC7-203ENST00000362006 KIF21AQ7Z4S6 1674 aa30.16■■■□□ 2.42
CCDC7-203ENST00000362006 TOP2BQ02880 1626 aa30.16■■■□□ 2.42
CCDC7-203ENST00000362006 BIVM-ERCC5R4GMW8 1640 aa30.14■■■□□ 2.42
CCDC7-203ENST00000362006 CUX1P39880 1505 aa30.12■■■□□ 2.41
CCDC7-203ENST00000362006 DNMBPQ6XZF7 1577 aa30.05■■■□□ 2.4
CCDC7-203ENST00000362006 ERCC6Q03468 1493 aa30.02■■■□□ 2.4
CCDC7-203ENST00000362006 TOPBP1Q92547 1522 aa29.98■■■□□ 2.39
CCDC7-203ENST00000362006 MRC2Q9UBG0 1479 aa29.97■■■□□ 2.39
CCDC7-203ENST00000362006 URB2Q14146 1524 aaKnown RBP29.97■■■□□ 2.39
CCDC7-203ENST00000362006 FGD5Q6ZNL6 1462 aa29.87■■■□□ 2.37
CCDC7-203ENST00000362006 WDR62O43379 1518 aa29.83■■■□□ 2.37
CCDC7-203ENST00000362006 THOC2Q8NI27 1593 aaKnown RBP29.8■■■□□ 2.36
CCDC7-203ENST00000362006 POLA1P09884 1462 aaPredicted RBP29.79■■■□□ 2.36
CCDC7-203ENST00000362006 EEA1Q15075 1411 aa29.78■■■□□ 2.36
CCDC7-203ENST00000362006 SOGA1O94964 1423 aa29.74■■■□□ 2.35
CCDC7-203ENST00000362006 FAM9AQ8IZU1 332 aaPredicted RBP29.66■■■□□ 2.34
CCDC7-203ENST00000362006 ABCA10Q8WWZ4 1543 aa29.65■■■□□ 2.34
CCDC7-203ENST00000362006 KIF27Q86VH2 1401 aa29.64■■■□□ 2.34
CCDC7-203ENST00000362006 RAD54L2Q9Y4B4 1467 aa29.64■■■□□ 2.33
CCDC7-203ENST00000362006 RUSC2Q8N2Y8 1516 aa29.62■■■□□ 2.33
CCDC7-203ENST00000362006 CUX2O14529 1486 aa29.6■■■□□ 2.33
CCDC7-203ENST00000362006 CSRNP3Q8WYN3 585 aa29.57■■■□□ 2.32
CCDC7-203ENST00000362006 TARBP1Q13395 1621 aaKnown RBP29.57■■■□□ 2.32
CCDC7-203ENST00000362006 IFT140Q96RY7 1462 aa29.57■■■□□ 2.32
CCDC7-203ENST00000362006 WDR97A6NE52 1622 aa29.56■■■□□ 2.32
CCDC7-203ENST00000362006 ABCA5Q8WWZ7 1642 aa29.42■■■□□ 2.3
CCDC7-203ENST00000362006 TDRD9Q8NDG6 1382 aaKnown RBP29.4■■■□□ 2.3
CCDC7-203ENST00000362006 GAPVD1Q14C86 1478 aa29.39■■■□□ 2.29
CCDC7-203ENST00000362006 IGF1RP08069 1367 aa29.38■■■□□ 2.29
CCDC7-203ENST00000362006 KIF21BO75037 1637 aa29.35■■■□□ 2.29
CCDC7-203ENST00000362006 LOC105371045A0A1W2PR82 267 aa29.34■■■□□ 2.29
CCDC7-203ENST00000362006 ERICH3Q5RHP9 1530 aa29.33■■■□□ 2.29
CCDC7-203ENST00000362006 PRXQ9BXM0 1461 aa29.3■■■□□ 2.28
CCDC7-203ENST00000362006 ZNF608Q9ULD9 1512 aaPredicted RBP29.3■■■□□ 2.28
CCDC7-203ENST00000362006 AQRO60306 1485 aaKnown RBP eCLIP29.28■■■□□ 2.28
CCDC7-203ENST00000362006 GOLGA3Q08378 1498 aa29.27■■■□□ 2.28
CCDC7-203ENST00000362006 CUL7Q14999 1698 aa29.26■■■□□ 2.27
CCDC7-203ENST00000362006 GRIN2BQ13224 1484 aa29.25■■■□□ 2.27
CCDC7-203ENST00000362006 PBRM1Q86U86 1689 aa29.24■■■□□ 2.27
CCDC7-203ENST00000362006 EIF4G3O43432 1585 aaKnown RBP29.24■■■□□ 2.27
CCDC7-203ENST00000362006 CARMIL1Q5VZK9 1371 aa29.24■■■□□ 2.27
CCDC7-203ENST00000362006 RAPGEF2Q9Y4G8 1499 aa29.18■■■□□ 2.26
CCDC7-203ENST00000362006 EHMT2Q96KQ7 1210 aa29.16■■■□□ 2.26
CCDC7-203ENST00000362006 UBTFP17480 764 aaKnown RBP29.12■■■□□ 2.25
CCDC7-203ENST00000362006 TNIKQ9UKE5 1360 aa29.11■■■□□ 2.25
CCDC7-203ENST00000362006 FHAD1B1AJZ9 1412 aa29.09■■■□□ 2.25
CCDC7-203ENST00000362006 MAGI1Q96QZ7 1491 aaPredicted RBP29.06■■■□□ 2.24
CCDC7-203ENST00000362006 ADAMTS12P58397 1594 aa29.06■■■□□ 2.24
CCDC7-203ENST00000362006 SNAPC4Q5SXM2 1469 aa29.03■■■□□ 2.24
CCDC7-203ENST00000362006 SYNJ2O15056 1496 aa28.93■■■□□ 2.22
CCDC7-203ENST00000362006 CHMP7Q8WUX9 453 aaPredicted RBP28.87■■■□□ 2.21
CCDC7-203ENST00000362006 CEP162Q5TB80 1403 aa28.86■■■□□ 2.21
CCDC7-203ENST00000362006 GRIN2AQ12879 1464 aa28.86■■■□□ 2.21
CCDC7-203ENST00000362006 CTTNBP2Q8WZ74 1663 aa28.84■■■□□ 2.21
CCDC7-203ENST00000362006 FBLN2P98095 1184 aa28.76■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms