RNA–Protein interactions for RNA: ENST00000361632.8

CSF3R-202, Transcript of colony stimulating factor 3 receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF3R, Length 2,847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-202ENST00000361632 SETD5Q9C0A6 1442 aa16.55■□□□□ 0.24
CSF3R-202ENST00000361632 ERICH6Q7L0X2 663 aa16.55■□□□□ 0.24
CSF3R-202ENST00000361632 CDK11AQ9UQ88 783 aaPredicted RBP16.53■□□□□ 0.24
CSF3R-202ENST00000361632 TIMELESSQ9UNS1 1208 aa16.52■□□□□ 0.24
CSF3R-202ENST00000361632 HIRIP3Q9BW71 556 aaPredicted RBP16.52■□□□□ 0.23
CSF3R-202ENST00000361632 ARHGAP35Q9NRY4 1499 aa16.49■□□□□ 0.23
CSF3R-202ENST00000361632 BIVM-ERCC5R4GMW8 1640 aa16.49■□□□□ 0.23
CSF3R-202ENST00000361632 ATAD2BQ9ULI0 1458 aa16.48■□□□□ 0.23
CSF3R-202ENST00000361632 BICRAQ9NZM4 1560 aa16.47■□□□□ 0.23
CSF3R-202ENST00000361632 MYT1LQ9UL68 1186 aa16.45■□□□□ 0.22
CSF3R-202ENST00000361632 IRX6P78412 446 aaPredicted RBP16.43■□□□□ 0.22
CSF3R-202ENST00000361632 KIF27Q86VH2 1401 aa16.42■□□□□ 0.22
CSF3R-202ENST00000361632 HNRNPUQ00839 825 aaKnown RBP eCLIP16.41■□□□□ 0.22
CSF3R-202ENST00000361632 FAM50AQ14320 339 aaKnown RBP16.41■□□□□ 0.22
CSF3R-202ENST00000361632 TIAM1Q13009 1591 aa16.4■□□□□ 0.22
CSF3R-202ENST00000361632 MAP3K1Q13233 1512 aa16.4■□□□□ 0.22
CSF3R-202ENST00000361632 PHLDB1Q86UU1 1377 aa16.39■□□□□ 0.21
CSF3R-202ENST00000361632 ERICH6BQ5W0A0 696 aa16.37■□□□□ 0.21
CSF3R-202ENST00000361632 LRRC9Q6ZRR7 1453 aa16.37■□□□□ 0.21
CSF3R-202ENST00000361632 DEKP35659 375 aaKnown RBP16.37■□□□□ 0.21
CSF3R-202ENST00000361632 PPP4R2Q9NY27 417 aa16.35■□□□□ 0.21
CSF3R-202ENST00000361632 CUX1P39880 1505 aa16.33■□□□□ 0.2
CSF3R-202ENST00000361632 TONSLQ96HA7 1378 aa16.33■□□□□ 0.2
CSF3R-202ENST00000361632 PRKCSHP14314 528 aaPredicted RBP16.27■□□□□ 0.2
CSF3R-202ENST00000361632 NOP58Q9Y2X3 529 aaKnown RBP16.24■□□□□ 0.19
CSF3R-202ENST00000361632 B4GALNT3Q6L9W6 998 aa16.23■□□□□ 0.19
CSF3R-202ENST00000361632 FHAD1B1AJZ9 1412 aa16.22■□□□□ 0.19
CSF3R-202ENST00000361632 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.21■□□□□ 0.19
CSF3R-202ENST00000361632 IGF1RP08069 1367 aa16.21■□□□□ 0.19
CSF3R-202ENST00000361632 CFAP43Q8NDM7 1665 aa16.19■□□□□ 0.18
CSF3R-202ENST00000361632 NBR1Q14596 966 aa16.19■□□□□ 0.18
CSF3R-202ENST00000361632 ATP1B4Q9UN42 357 aaPredicted RBP16.19■□□□□ 0.18
CSF3R-202ENST00000361632 WASHC2AQ641Q2 1341 aa16.18■□□□□ 0.18
CSF3R-202ENST00000361632 PAK3O75914 559 aaPredicted RBP16.17■□□□□ 0.18
CSF3R-202ENST00000361632 CCDC18Q5T9S5 1454 aa16.17■□□□□ 0.18
CSF3R-202ENST00000361632 UACAQ9BZF9 1416 aa16.16■□□□□ 0.18
CSF3R-202ENST00000361632 CCDC184Q52MB2 194 aa16.16■□□□□ 0.18
CSF3R-202ENST00000361632 PCF11O94913 1555 aaKnown RBP16.16■□□□□ 0.18
CSF3R-202ENST00000361632 CARMIL1Q5VZK9 1371 aa16.15■□□□□ 0.18
CSF3R-202ENST00000361632 HSPA5P11021 654 aaKnown RBP16.14■□□□□ 0.17
CSF3R-202ENST00000361632 P3H3Q8IVL6 736 aa16.14■□□□□ 0.17
CSF3R-202ENST00000361632 KDM5BQ9UGL1 1544 aa16.13■□□□□ 0.17
CSF3R-202ENST00000361632 ZBED9Q6R2W3 1325 aa16.13■□□□□ 0.17
CSF3R-202ENST00000361632 FAM9BQ8IZU0 186 aa16.12■□□□□ 0.17
CSF3R-202ENST00000361632 HFM1A2PYH4 1435 aa16.11■□□□□ 0.17
CSF3R-202ENST00000361632 CNTLNQ9NXG0 1405 aa16.1■□□□□ 0.17
CSF3R-202ENST00000361632 FGD6Q6ZV73 1430 aa16.1■□□□□ 0.17
CSF3R-202ENST00000361632 NCOA2Q15596 1464 aa16.1■□□□□ 0.17
CSF3R-202ENST00000361632 PRKRIP1Q9H875 184 aaPredicted RBP16.09■□□□□ 0.17
CSF3R-202ENST00000361632 MRS2Q9HD23 443 aa16.09■□□□□ 0.17
CSF3R-202ENST00000361632 CFTRP13569 1480 aa16.09■□□□□ 0.17
CSF3R-202ENST00000361632 EIF4G2P78344 907 aaKnown RBP eCLIP16.08■□□□□ 0.16
CSF3R-202ENST00000361632 FYCO1Q9BQS8 1478 aa16.08■□□□□ 0.16
CSF3R-202ENST00000361632 PTPRKQ15262 1439 aa16.08■□□□□ 0.16
CSF3R-202ENST00000361632 PTPN23Q9H3S7 1636 aa16.07■□□□□ 0.16
CSF3R-202ENST00000361632 ANP32AP39687 249 aaKnown RBP16.07■□□□□ 0.16
CSF3R-202ENST00000361632 IPO9Q96P70 1041 aaKnown RBP16.07■□□□□ 0.16
CSF3R-202ENST00000361632 ANO8Q9HCE9 1232 aaPredicted RBP16.07■□□□□ 0.16
CSF3R-202ENST00000361632 RTL5Q5HYW3 569 aaPredicted RBP16.06■□□□□ 0.16
CSF3R-202ENST00000361632 FHOD3Q2V2M9 1422 aa16.06■□□□□ 0.16
CSF3R-202ENST00000361632 CASKIN1Q8WXD9 1431 aa16.05■□□□□ 0.16
CSF3R-202ENST00000361632 AQRO60306 1485 aaKnown RBP eCLIP16.05■□□□□ 0.162e-11■■■■■ 56.9
CSF3R-202ENST00000361632 NAIPQ13075 1403 aa16.05■□□□□ 0.16
CSF3R-202ENST00000361632 FGD5Q6ZNL6 1462 aa16.04■□□□□ 0.16
CSF3R-202ENST00000361632 ZBTB47Q9UFB7 747 aaPredicted RBP16.03■□□□□ 0.16
CSF3R-202ENST00000361632 HMGXB3Q12766 1538 aa16.03■□□□□ 0.16
CSF3R-202ENST00000361632 NCAPD3P42695 1498 aa16.03■□□□□ 0.16
CSF3R-202ENST00000361632 CCDC7Q96M83 1385 aa16.01■□□□□ 0.15
CSF3R-202ENST00000361632 C11orf95C9JLR9 678 aaPredicted RBP16.01■□□□□ 0.15
CSF3R-202ENST00000361632 FMN1Q68DA7 1419 aa16.01■□□□□ 0.15
CSF3R-202ENST00000361632 CCDC136Q96JN2 1154 aa16■□□□□ 0.15
CSF3R-202ENST00000361632 NCOA1Q15788 1441 aa16■□□□□ 0.15
CSF3R-202ENST00000361632 SMG6Q86US8 1419 aaKnown RBP15.99■□□□□ 0.15
CSF3R-202ENST00000361632 MTUS2Q5JR59 1369 aa15.98■□□□□ 0.15
CSF3R-202ENST00000361632 AKNAQ7Z591 1439 aa15.98■□□□□ 0.15
CSF3R-202ENST00000361632 EFCAB5A4FU69 1503 aa15.97■□□□□ 0.15
CSF3R-202ENST00000361632 SALL2Q9Y467 1007 aaPredicted RBP15.97■□□□□ 0.15
CSF3R-202ENST00000361632 RNF123Q5XPI4 1314 aa15.96■□□□□ 0.14
CSF3R-202ENST00000361632 NUDCQ9Y266 331 aa15.95■□□□□ 0.14
CSF3R-202ENST00000361632 IL27Q8NEV9 243 aa15.94■□□□□ 0.14
CSF3R-202ENST00000361632 L3MBTL2Q969R5 705 aa15.93■□□□□ 0.14
CSF3R-202ENST00000361632 MYOM3Q5VTT5 1437 aa15.93■□□□□ 0.14
CSF3R-202ENST00000361632 RRP7BPQ9NSQ0 103 aa15.91■□□□□ 0.14
CSF3R-202ENST00000361632 DENND4BO75064 1496 aaPredicted RBP15.91■□□□□ 0.14
CSF3R-202ENST00000361632 KIF7Q2M1P5 1343 aa15.9■□□□□ 0.14
CSF3R-202ENST00000361632 SNAPC4Q5SXM2 1469 aa15.89■□□□□ 0.13
CSF3R-202ENST00000361632 HECW1Q76N89 1606 aa15.87■□□□□ 0.13
CSF3R-202ENST00000361632 CHIC2Q9UKJ5 165 aa15.87■□□□□ 0.13
CSF3R-202ENST00000361632 MPHOSPH9Q99550 1183 aa15.86■□□□□ 0.13
CSF3R-202ENST00000361632 RTN4Q9NQC3 1192 aaKnown RBP15.86■□□□□ 0.13
CSF3R-202ENST00000361632 PRDM2Q13029 1718 aa15.86■□□□□ 0.13
CSF3R-202ENST00000361632 NBPF8Q3BBV2 869 aa15.86■□□□□ 0.13
CSF3R-202ENST00000361632 NPM2Q86SE8 214 aaKnown RBP15.84■□□□□ 0.13
CSF3R-202ENST00000361632 USP35Q9P2H5 1018 aa15.84■□□□□ 0.13
CSF3R-202ENST00000361632 SPATA31E1Q6ZUB1 1445 aa15.83■□□□□ 0.13
CSF3R-202ENST00000361632 NEFMP07197 916 aa15.83■□□□□ 0.13
CSF3R-202ENST00000361632 ABCA5Q8WWZ7 1642 aa15.83■□□□□ 0.12
CSF3R-202ENST00000361632 FOXD1Q16676 465 aa15.82■□□□□ 0.12
CSF3R-202ENST00000361632 LAS1LQ9Y4W2 734 aaKnown RBP15.82■□□□□ 0.12
CSF3R-202ENST00000361632 SUPT6HQ7KZ85 1726 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms