RNA–Protein interactions for RNA: ENST00000361632.8

CSF3R-202, Transcript of colony stimulating factor 3 receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF3R, Length 2,847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-202ENST00000361632 NISCHQ9Y2I1 1504 aa22.55■■□□□ 1.2
CSF3R-202ENST00000361632 HRCP23327 699 aa19.92■□□□□ 0.78
CSF3R-202ENST00000361632 SHROOM4Q9ULL8 1493 aa19.82■□□□□ 0.76
CSF3R-202ENST00000361632 SUPT5HO00267 1087 aaKnown RBP19.74■□□□□ 0.75
CSF3R-202ENST00000361632 MYO15BQ96JP2 1530 aa19.52■□□□□ 0.72
CSF3R-202ENST00000361632 PCGF6Q9BYE7 350 aa19.52■□□□□ 0.71
CSF3R-202ENST00000361632 CHIC1Q5VXU3 224 aa19.45■□□□□ 0.7
CSF3R-202ENST00000361632 PPARGC1BQ86YN6 1023 aaKnown RBP19.44■□□□□ 0.7
CSF3R-202ENST00000361632 ZCCHC6Q5VYS8 1495 aaKnown RBP19.18■□□□□ 0.66
CSF3R-202ENST00000361632 DCAF1Q9Y4B6 1507 aa19.16■□□□□ 0.66
CSF3R-202ENST00000361632 PELP1Q8IZL8 1130 aaKnown RBP19.13■□□□□ 0.65
CSF3R-202ENST00000361632 TRIM26Q12899 539 aaPredicted RBP18.96■□□□□ 0.63
CSF3R-202ENST00000361632 LOC105371045A0A1W2PR82 267 aa18.95■□□□□ 0.62
CSF3R-202ENST00000361632 CCDC180Q9P1Z9 1646 aa18.88■□□□□ 0.61
CSF3R-202ENST00000361632 ZEB1P37275 1124 aaPredicted RBP18.81■□□□□ 0.6
CSF3R-202ENST00000361632 SCAF1Q9H7N4 1312 aaKnown RBP18.76■□□□□ 0.59
CSF3R-202ENST00000361632 DCAF8L2P0C7V8 631 aa18.7■□□□□ 0.58
CSF3R-202ENST00000361632 MYT1Q01538 1121 aa18.37■□□□□ 0.53
CSF3R-202ENST00000361632 ACIN1Q9UKV3 1341 aaKnown RBP18.37■□□□□ 0.53
CSF3R-202ENST00000361632 TRIM41Q8WV44 630 aa18.3■□□□□ 0.52
CSF3R-202ENST00000361632 NEUROD1Q13562 356 aa18.29■□□□□ 0.52
CSF3R-202ENST00000361632 FAM9AQ8IZU1 332 aaPredicted RBP18.24■□□□□ 0.51
CSF3R-202ENST00000361632 ABCC9O60706 1549 aa18.21■□□□□ 0.51
CSF3R-202ENST00000361632 GTF3C3Q9Y5Q9 886 aa18.18■□□□□ 0.5
CSF3R-202ENST00000361632 CENPBP07199 599 aaPredicted RBP18.16■□□□□ 0.5
CSF3R-202ENST00000361632 RSF1Q96T23 1441 aaPredicted RBP18.13■□□□□ 0.49
CSF3R-202ENST00000361632 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.11■□□□□ 0.49
CSF3R-202ENST00000361632 EHMT2Q96KQ7 1210 aa18.11■□□□□ 0.49
CSF3R-202ENST00000361632 CCER1Q8TC90 406 aaPredicted RBP18.1■□□□□ 0.49
CSF3R-202ENST00000361632 DIEXFQ68CQ4 756 aaKnown RBP18.09■□□□□ 0.49
CSF3R-202ENST00000361632 RB1CC1Q8TDY2 1594 aa18.01■□□□□ 0.47
CSF3R-202ENST00000361632 SCRIBQ14160 1630 aa17.83■□□□□ 0.45
CSF3R-202ENST00000361632 ZNF316A6NFI3 1004 aaPredicted RBP17.78■□□□□ 0.44
CSF3R-202ENST00000361632 YTHDC1Q96MU7 727 aaKnown RBP17.73■□□□□ 0.43
CSF3R-202ENST00000361632 WRNQ14191 1432 aaPredicted RBP eCLIP17.69■□□□□ 0.42
CSF3R-202ENST00000361632 TTBK1Q5TCY1 1321 aaPredicted RBP17.68■□□□□ 0.42
CSF3R-202ENST00000361632 MIER1Q8N108 512 aa17.62■□□□□ 0.41
CSF3R-202ENST00000361632 CECR2Q9BXF3 1484 aa17.61■□□□□ 0.41
CSF3R-202ENST00000361632 MROH2BQ7Z745 1585 aa17.59■□□□□ 0.41
CSF3R-202ENST00000361632 CEP162Q5TB80 1403 aa17.57■□□□□ 0.4
CSF3R-202ENST00000361632 WIZO95785 1651 aa17.52■□□□□ 0.39
CSF3R-202ENST00000361632 EIF4G1Q04637 1599 aaKnown RBP17.5■□□□□ 0.39
CSF3R-202ENST00000361632 TNIKQ9UKE5 1360 aa17.49■□□□□ 0.39
CSF3R-202ENST00000361632 CCDC88BA6NC98 1476 aa17.43■□□□□ 0.38
CSF3R-202ENST00000361632 BAZ1AQ9NRL2 1556 aaPredicted RBP17.42■□□□□ 0.38
CSF3R-202ENST00000361632 CLSPNQ9HAW4 1339 aa17.38■□□□□ 0.37
CSF3R-202ENST00000361632 ABCC8Q09428 1581 aa17.38■□□□□ 0.37
CSF3R-202ENST00000361632 SOGA1O94964 1423 aa17.37■□□□□ 0.37
CSF3R-202ENST00000361632 HNRNPUL2Q1KMD3 747 aaKnown RBP17.37■□□□□ 0.37
CSF3R-202ENST00000361632 UBTFP17480 764 aaKnown RBP17.36■□□□□ 0.37
CSF3R-202ENST00000361632 CSRNP3Q8WYN3 585 aa17.34■□□□□ 0.37
CSF3R-202ENST00000361632 SUPT16HQ9Y5B9 1047 aaKnown RBP17.34■□□□□ 0.37
CSF3R-202ENST00000361632 EEA1Q15075 1411 aa17.32■□□□□ 0.36
CSF3R-202ENST00000361632 NACADO15069 1562 aa17.27■□□□□ 0.36
CSF3R-202ENST00000361632 GOLGA3Q08378 1498 aa17.26■□□□□ 0.35
CSF3R-202ENST00000361632 ANP32EQ9BTT0 268 aa17.25■□□□□ 0.35
CSF3R-202ENST00000361632 RUSC2Q8N2Y8 1516 aa17.25■□□□□ 0.35
CSF3R-202ENST00000361632 TSHZ2Q9NRE2 1034 aa17.25■□□□□ 0.35
CSF3R-202ENST00000361632 TOP2AP11388 1531 aaKnown RBP17.22■□□□□ 0.35
CSF3R-202ENST00000361632 SMARCA2P51531 1590 aa17.16■□□□□ 0.34
CSF3R-202ENST00000361632 BCL11AQ9H165 835 aa17.13■□□□□ 0.33
CSF3R-202ENST00000361632 CLIP1P30622 1438 aa17.11■□□□□ 0.33
CSF3R-202ENST00000361632 APLP2Q06481 763 aa17.11■□□□□ 0.33
CSF3R-202ENST00000361632 VPS8Q8N3P4 1428 aa17.1■□□□□ 0.33
CSF3R-202ENST00000361632 CEP164Q9UPV0 1460 aa17.09■□□□□ 0.33
CSF3R-202ENST00000361632 DHX57Q6P158 1386 aaKnown RBP17.06■□□□□ 0.32
CSF3R-202ENST00000361632 KIF21BO75037 1637 aa17.03■□□□□ 0.32
CSF3R-202ENST00000361632 SMARCA4P51532 1647 aa17.03■□□□□ 0.32
CSF3R-202ENST00000361632 BAZ1BQ9UIG0 1483 aaKnown RBP16.96■□□□□ 0.3
CSF3R-202ENST00000361632 BCANQ96GW7 911 aa16.94■□□□□ 0.3
CSF3R-202ENST00000361632 KCNH8Q96L42 1107 aa16.92■□□□□ 0.3
CSF3R-202ENST00000361632 RANGAP1P46060 587 aaPredicted RBP16.91■□□□□ 0.3
CSF3R-202ENST00000361632 RAPGEF2Q9Y4G8 1499 aa16.9■□□□□ 0.3
CSF3R-202ENST00000361632 FKBP8Q14318 412 aa16.9■□□□□ 0.3
CSF3R-202ENST00000361632 SYNJ1O43426 1573 aa16.88■□□□□ 0.29
CSF3R-202ENST00000361632 RBM19Q9Y4C8 960 aaKnown RBP16.85■□□□□ 0.29
CSF3R-202ENST00000361632 KANK4Q5T7N3 995 aaPredicted RBP16.81■□□□□ 0.28
CSF3R-202ENST00000361632 RRBP1Q9P2E9 1410 aaKnown RBP16.79■□□□□ 0.28
CSF3R-202ENST00000361632 NEFLP07196 543 aa16.79■□□□□ 0.28
CSF3R-202ENST00000361632 CUX2O14529 1486 aa16.79■□□□□ 0.28
CSF3R-202ENST00000361632 PABPN1Q86U42 306 aaKnown RBP eCLIP16.78■□□□□ 0.284e-7■■□□□ 12.2
CSF3R-202ENST00000361632 ARAP1Q96P48 1450 aa16.74■□□□□ 0.27
CSF3R-202ENST00000361632 DDX10Q13206 875 aaKnown RBP16.73■□□□□ 0.27
CSF3R-202ENST00000361632 CCNB3Q8WWL7 1395 aa16.71■□□□□ 0.27
CSF3R-202ENST00000361632 ITGAEP38570 1179 aa16.7■□□□□ 0.26
CSF3R-202ENST00000361632 MSH5O43196 834 aa16.68■□□□□ 0.26
CSF3R-202ENST00000361632 MAPKBP1O60336 1514 aa16.66■□□□□ 0.26
CSF3R-202ENST00000361632 RAB3GAP2Q9H2M9 1393 aa16.66■□□□□ 0.26
CSF3R-202ENST00000361632 PPP1R15AO75807 674 aaPredicted RBP16.65■□□□□ 0.26
CSF3R-202ENST00000361632 ERICH3Q5RHP9 1530 aa16.65■□□□□ 0.26
CSF3R-202ENST00000361632 TRIM52Q96A61 297 aa16.65■□□□□ 0.26
CSF3R-202ENST00000361632 CCER2I3L3R5 266 aa16.64■□□□□ 0.25
CSF3R-202ENST00000361632 PRXQ9BXM0 1461 aa16.63■□□□□ 0.25
CSF3R-202ENST00000361632 UNC13AQ9UPW8 1703 aa16.63■□□□□ 0.25
CSF3R-202ENST00000361632 PEG3Q9GZU2 1588 aa16.63■□□□□ 0.25
CSF3R-202ENST00000361632 WDR97A6NE52 1622 aa16.6■□□□□ 0.25
CSF3R-202ENST00000361632 FANCIQ9NVI1 1328 aa16.59■□□□□ 0.25
CSF3R-202ENST00000361632 ANP32CO43423 234 aa16.59■□□□□ 0.25
CSF3R-202ENST00000361632 TOP2BQ02880 1626 aa16.59■□□□□ 0.25
CSF3R-202ENST00000361632 SIN3AQ96ST3 1273 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms