RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 CLIP1P30622 1438 aa39.82■■■■□ 3.96
SHARPIN-201ENST00000359551 CEP170Q5SW79 1584 aa39.77■■■■□ 3.96
SHARPIN-201ENST00000359551 NUP160Q12769 1436 aa39.77■■■■□ 3.96
SHARPIN-201ENST00000359551 FBLN2P98095 1184 aa39.73■■■■□ 3.95
SHARPIN-201ENST00000359551 IQGAP2Q13576 1575 aa39.73■■■■□ 3.95
SHARPIN-201ENST00000359551 KIAA0586Q9BVV6 1533 aa39.72■■■■□ 3.95
SHARPIN-201ENST00000359551 ARHGAP35Q9NRY4 1499 aa39.64■■■■□ 3.94
SHARPIN-201ENST00000359551 EFCAB5A4FU69 1503 aa39.62■■■■□ 3.93
SHARPIN-201ENST00000359551 RANGAP1P46060 587 aaPredicted RBP39.6■■■■□ 3.93
SHARPIN-201ENST00000359551 SAMD9Q5K651 1589 aa39.57■■■■□ 3.93
SHARPIN-201ENST00000359551 UGGT2Q9NYU1 1516 aa39.56■■■■□ 3.92
SHARPIN-201ENST00000359551 ARAP1Q96P48 1450 aa39.54■■■■□ 3.92
SHARPIN-201ENST00000359551 VPS8Q8N3P4 1428 aa39.42■■■■□ 3.9
SHARPIN-201ENST00000359551 CLASP1Q7Z460 1538 aa39.4■■■■□ 3.9
SHARPIN-201ENST00000359551 SHROOM2Q13796 1616 aa39.35■■■■□ 3.89
SHARPIN-201ENST00000359551 DISP1Q96F81 1524 aa39.35■■■■□ 3.89
SHARPIN-201ENST00000359551 KIAA0556O60303 1618 aa39.34■■■■□ 3.89
SHARPIN-201ENST00000359551 FHOD3Q2V2M9 1422 aa39.32■■■■□ 3.89
SHARPIN-201ENST00000359551 JPH4Q96JJ6 628 aa39.32■■■■□ 3.89
SHARPIN-201ENST00000359551 P3H3Q8IVL6 736 aa39.27■■■■□ 3.88
SHARPIN-201ENST00000359551 FMN1Q68DA7 1419 aa39.2■■■■□ 3.87
SHARPIN-201ENST00000359551 CARMIL2Q6F5E8 1435 aa39.2■■■■□ 3.87
SHARPIN-201ENST00000359551 OSCARQ8IYS5 282 aa39.15■■■■□ 3.86
SHARPIN-201ENST00000359551 PRG4Q92954 1404 aaPredicted RBP39.14■■■■□ 3.86
SHARPIN-201ENST00000359551 PCF11O94913 1555 aaKnown RBP39.1■■■■□ 3.85
SHARPIN-201ENST00000359551 CASKIN1Q8WXD9 1431 aa39.06■■■■□ 3.84
SHARPIN-201ENST00000359551 FYCO1Q9BQS8 1478 aa39.05■■■■□ 3.84
SHARPIN-201ENST00000359551 ERCC6L2Q5T890 1561 aa38.99■■■■□ 3.83
SHARPIN-201ENST00000359551 MAP3K1Q13233 1512 aa38.92■■■■□ 3.82
SHARPIN-201ENST00000359551 HECW1Q76N89 1606 aa38.89■■■■□ 3.82
SHARPIN-201ENST00000359551 LRRIQ1Q96JM4 1722 aa38.88■■■■□ 3.82
SHARPIN-201ENST00000359551 RAPGEF6Q8TEU7 1601 aa38.88■■■■□ 3.81
SHARPIN-201ENST00000359551 CFAP43Q8NDM7 1665 aa38.87■■■■□ 3.81
SHARPIN-201ENST00000359551 APLP2Q06481 763 aa38.86■■■■□ 3.81
SHARPIN-201ENST00000359551 TIAM1Q13009 1591 aa38.86■■■■□ 3.81
SHARPIN-201ENST00000359551 PTPRGP23470 1445 aa38.83■■■■□ 3.81
SHARPIN-201ENST00000359551 ABCA8O94911 1581 aa38.82■■■■□ 3.81
SHARPIN-201ENST00000359551 PLB1Q6P1J6 1458 aa38.79■■■■□ 3.8
SHARPIN-201ENST00000359551 DNAJC5Q9H3Z4 198 aa38.78■■■■□ 3.8
SHARPIN-201ENST00000359551 TTBK1Q5TCY1 1321 aaPredicted RBP38.76■■■■□ 3.8
SHARPIN-201ENST00000359551 CCDC18Q5T9S5 1454 aa38.75■■■■□ 3.79
SHARPIN-201ENST00000359551 NUP153P49790 1475 aaKnown RBP38.74■■■■□ 3.79
SHARPIN-201ENST00000359551 ATP1B4Q9UN42 357 aaPredicted RBP38.73■■■■□ 3.79
SHARPIN-201ENST00000359551 EPRSP07814 1512 aaKnown RBP38.71■■■■□ 3.79
SHARPIN-201ENST00000359551 PPARGC1BQ86YN6 1023 aaKnown RBP38.69■■■■□ 3.78
SHARPIN-201ENST00000359551 UACAQ9BZF9 1416 aa38.64■■■■□ 3.78
SHARPIN-201ENST00000359551 LRRC9Q6ZRR7 1453 aa38.64■■■■□ 3.78
SHARPIN-201ENST00000359551 KANK4Q5T7N3 995 aaPredicted RBP38.64■■■■□ 3.78
SHARPIN-201ENST00000359551 CDK13Q14004 1512 aaKnown RBP38.61■■■■□ 3.77
SHARPIN-201ENST00000359551 ABCC2Q92887 1545 aa38.59■■■■□ 3.77
SHARPIN-201ENST00000359551 ARHGEF11O15085 1522 aa38.58■■■■□ 3.77
SHARPIN-201ENST00000359551 UHRF1BP1LA0JNW5 1464 aa38.56■■■■□ 3.76
SHARPIN-201ENST00000359551 MAGI3Q5TCQ9 1506 aa38.49■■■■□ 3.75
SHARPIN-201ENST00000359551 EHBP1L1Q8N3D4 1523 aa38.49■■■■□ 3.75
SHARPIN-201ENST00000359551 ATP10BO94823 1461 aa38.48■■■■□ 3.75
SHARPIN-201ENST00000359551 RIMBP3CA6NJZ7 1639 aa38.46■■■■□ 3.75
SHARPIN-201ENST00000359551 RIMBP3BA6NNM3 1639 aa38.46■■■■□ 3.75
SHARPIN-201ENST00000359551 RIMBP3Q9UFD9 1639 aa38.46■■■■□ 3.75
SHARPIN-201ENST00000359551 MTUS2Q5JR59 1369 aa38.44■■■■□ 3.74
SHARPIN-201ENST00000359551 ADCY10Q96PN6 1610 aa38.43■■■■□ 3.74
SHARPIN-201ENST00000359551 ARID3CA6NKF2 412 aa38.43■■■■□ 3.74
SHARPIN-201ENST00000359551 TRIM26Q12899 539 aaPredicted RBP38.39■■■■□ 3.74
SHARPIN-201ENST00000359551 KDM5BQ9UGL1 1544 aa38.38■■■■□ 3.73
SHARPIN-201ENST00000359551 SUPT6HQ7KZ85 1726 aaKnown RBP38.37■■■■□ 3.73
SHARPIN-201ENST00000359551 CDK11AQ9UQ88 783 aaPredicted RBP38.36■■■■□ 3.73
SHARPIN-201ENST00000359551 ZCCHC11Q5TAX3 1644 aaKnown RBP38.34■■■■□ 3.73
SHARPIN-201ENST00000359551 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.31■■■■□ 3.72
SHARPIN-201ENST00000359551 HNRNPUL2Q1KMD3 747 aaKnown RBP38.31■■■■□ 3.72
SHARPIN-201ENST00000359551 TROQ12816 1431 aaPredicted RBP38.3■■■■□ 3.72
SHARPIN-201ENST00000359551 NCOA2Q15596 1464 aa38.26■■■■□ 3.72
SHARPIN-201ENST00000359551 PHLDB1Q86UU1 1377 aa38.21■■■■□ 3.71
SHARPIN-201ENST00000359551 PLEKHD1A6NEE1 506 aa38.2■■■■□ 3.71
SHARPIN-201ENST00000359551 RRBP1Q9P2E9 1410 aaKnown RBP38.17■■■■□ 3.7
SHARPIN-201ENST00000359551 KIF14Q15058 1648 aa38.15■■■■□ 3.7
SHARPIN-201ENST00000359551 PCGF6Q9BYE7 350 aa38.13■■■■□ 3.69
SHARPIN-201ENST00000359551 MYOM3Q5VTT5 1437 aa38.08■■■■□ 3.69
SHARPIN-201ENST00000359551 CYB5RLQ6IPT4 315 aa38.07■■■■□ 3.68
SHARPIN-201ENST00000359551 ABCC10Q5T3U5 1492 aa38.04■■■■□ 3.68
SHARPIN-201ENST00000359551 CCNB3Q8WWL7 1395 aa38.03■■■■□ 3.68
SHARPIN-201ENST00000359551 FGD6Q6ZV73 1430 aa38.02■■■■□ 3.68
SHARPIN-201ENST00000359551 WDR7Q9Y4E6 1490 aa38■■■■□ 3.67
SHARPIN-201ENST00000359551 ITSN2Q9NZM3 1697 aa37.99■■■■□ 3.67
SHARPIN-201ENST00000359551 NPM1P06748 294 aaKnown RBP eCLIP37.98■■■■□ 3.67
SHARPIN-201ENST00000359551 ASXL2Q76L83 1435 aa37.96■■■■□ 3.67
SHARPIN-201ENST00000359551 CDC42BPAQ5VT25 1732 aa37.95■■■■□ 3.67
SHARPIN-201ENST00000359551 MIA2Q96PC5 1412 aa37.95■■■■□ 3.67
SHARPIN-201ENST00000359551 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.93■■■■□ 3.66
SHARPIN-201ENST00000359551 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.92■■■■□ 3.66
SHARPIN-201ENST00000359551 GPATCH8Q9UKJ3 1502 aaKnown RBP37.92■■■■□ 3.66
SHARPIN-201ENST00000359551 TTC37Q6PGP7 1564 aa37.9■■■■□ 3.66
SHARPIN-201ENST00000359551 PTPN23Q9H3S7 1636 aa37.9■■■■□ 3.66
SHARPIN-201ENST00000359551 MAPKBP1O60336 1514 aa37.9■■■■□ 3.66
SHARPIN-201ENST00000359551 TCOF1Q13428 1488 aaKnown RBP37.87■■■■□ 3.65
SHARPIN-201ENST00000359551 PREX2Q70Z35 1606 aa37.84■■■■□ 3.65
SHARPIN-201ENST00000359551 MYO5CQ9NQX4 1742 aa37.83■■■■□ 3.65
SHARPIN-201ENST00000359551 KCNH8Q96L42 1107 aa37.81■■■■□ 3.64
SHARPIN-201ENST00000359551 CDC42BPBQ9Y5S2 1711 aa37.81■■■■□ 3.64
SHARPIN-201ENST00000359551 ABCA9Q8IUA7 1624 aa37.8■■■■□ 3.64
SHARPIN-201ENST00000359551 FAM50AQ14320 339 aaKnown RBP37.75■■■■□ 3.63
SHARPIN-201ENST00000359551 CFDP1Q9UEE9 299 aaPredicted RBP37.72■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms