RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 NISCHQ9Y2I1 1504 aa57.89■■■■■ 6.86
SHARPIN-201ENST00000359551 CCDC180Q9P1Z9 1646 aa50.89■■■■■ 5.74
SHARPIN-201ENST00000359551 ZCCHC6Q5VYS8 1495 aaKnown RBP48.54■■■■■ 5.36
SHARPIN-201ENST00000359551 ABCC9O60706 1549 aa48.35■■■■■ 5.33
SHARPIN-201ENST00000359551 DCAF1Q9Y4B6 1507 aa47.99■■■■■ 5.27
SHARPIN-201ENST00000359551 MYO15BQ96JP2 1530 aa47.65■■■■■ 5.22
SHARPIN-201ENST00000359551 DCAF8L2P0C7V8 631 aa47.65■■■■■ 5.22
SHARPIN-201ENST00000359551 NACADO15069 1562 aa47.46■■■■■ 5.19
SHARPIN-201ENST00000359551 RB1CC1Q8TDY2 1594 aa47.16■■■■■ 5.14
SHARPIN-201ENST00000359551 SHROOM4Q9ULL8 1493 aa46.53■■■■■ 5.04
SHARPIN-201ENST00000359551 SCRIBQ14160 1630 aa46.51■■■■■ 5.04
SHARPIN-201ENST00000359551 UNC13AQ9UPW8 1703 aa46.26■■■■■ 5
SHARPIN-201ENST00000359551 BICRAQ9NZM4 1560 aa45.75■■■■■ 4.91
SHARPIN-201ENST00000359551 PABPN1Q86U42 306 aaKnown RBP eCLIP45.39■■■■■ 4.86
SHARPIN-201ENST00000359551 CECR2Q9BXF3 1484 aa44.94■■■■■ 4.78
SHARPIN-201ENST00000359551 BAZ1AQ9NRL2 1556 aaPredicted RBP44.76■■■■■ 4.76
SHARPIN-201ENST00000359551 MROH2BQ7Z745 1585 aa44.65■■■■■ 4.74
SHARPIN-201ENST00000359551 SMARCA4P51532 1647 aa44.64■■■■■ 4.74
SHARPIN-201ENST00000359551 RSF1Q96T23 1441 aaPredicted RBP44.63■■■■■ 4.74
SHARPIN-201ENST00000359551 SUPT5HO00267 1087 aaKnown RBP44.48■■■■■ 4.71
SHARPIN-201ENST00000359551 EIF4G1Q04637 1599 aaKnown RBP44.39■■■■■ 4.7
SHARPIN-201ENST00000359551 WIZO95785 1651 aa44.27■■■■■ 4.68
SHARPIN-201ENST00000359551 PEG3Q9GZU2 1588 aa44.2■■■■■ 4.67
SHARPIN-201ENST00000359551 SMARCA2P51531 1590 aa44.02■■■■■ 4.64
SHARPIN-201ENST00000359551 ATAD2BQ9ULI0 1458 aa44.01■■■■■ 4.64
SHARPIN-201ENST00000359551 CC2D2AQ9P2K1 1620 aa43.86■■■■■ 4.61
SHARPIN-201ENST00000359551 TOP2AP11388 1531 aaKnown RBP43.85■■■■■ 4.61
SHARPIN-201ENST00000359551 NCAPD3P42695 1498 aa43.77■■■■■ 4.6
SHARPIN-201ENST00000359551 HMGXB3Q12766 1538 aa43.71■■■■■ 4.59
SHARPIN-201ENST00000359551 BAZ1BQ9UIG0 1483 aaKnown RBP43.7■■■■■ 4.59
SHARPIN-201ENST00000359551 CCDC88BA6NC98 1476 aa43.31■■■■■ 4.52
SHARPIN-201ENST00000359551 DNAJC5BQ9UF47 199 aa43.12■■■■■ 4.49
SHARPIN-201ENST00000359551 CFTRP13569 1480 aa42.62■■■■■ 4.41
SHARPIN-201ENST00000359551 CADPSQ9ULU8 1353 aa42.54■■■■■ 4.4
SHARPIN-201ENST00000359551 PRDM2Q13029 1718 aa42.52■■■■■ 4.4
SHARPIN-201ENST00000359551 LAMC3Q9Y6N6 1575 aa42.4■■■■■ 4.38
SHARPIN-201ENST00000359551 CHIC1Q5VXU3 224 aa42.39■■■■■ 4.38
SHARPIN-201ENST00000359551 NESP48681 1621 aa42.3■■■■■ 4.36
SHARPIN-201ENST00000359551 ABCC8Q09428 1581 aa42.18■■■■■ 4.34
SHARPIN-201ENST00000359551 FANCD2Q9BXW9 1451 aa42.06■■■■■ 4.32
SHARPIN-201ENST00000359551 WRNQ14191 1432 aaPredicted RBP eCLIP42.02■■■■■ 4.32
SHARPIN-201ENST00000359551 PDS5BQ9NTI5 1447 aa42■■■■■ 4.31
SHARPIN-201ENST00000359551 TRIM41Q8WV44 630 aa41.93■■■■■ 4.3
SHARPIN-201ENST00000359551 KIF21AQ7Z4S6 1674 aa41.9■■■■■ 4.3
SHARPIN-201ENST00000359551 SYNJ1O43426 1573 aa41.9■■■■■ 4.3
SHARPIN-201ENST00000359551 CEP164Q9UPV0 1460 aa41.87■■■■■ 4.29
SHARPIN-201ENST00000359551 BIVM-ERCC5R4GMW8 1640 aa41.84■■■■■ 4.29
SHARPIN-201ENST00000359551 TOP2BQ02880 1626 aa41.83■■■■■ 4.29
SHARPIN-201ENST00000359551 CUX1P39880 1505 aa41.81■■■■■ 4.28
SHARPIN-201ENST00000359551 DNMBPQ6XZF7 1577 aa41.66■■■■■ 4.26
SHARPIN-201ENST00000359551 URB2Q14146 1524 aaKnown RBP41.59■■■■■ 4.25
SHARPIN-201ENST00000359551 TOPBP1Q92547 1522 aa41.58■■■■■ 4.25
SHARPIN-201ENST00000359551 ERCC6Q03468 1493 aa41.53■■■■■ 4.24
SHARPIN-201ENST00000359551 MRC2Q9UBG0 1479 aa41.53■■■■■ 4.24
SHARPIN-201ENST00000359551 FGD5Q6ZNL6 1462 aa41.41■■■■■ 4.22
SHARPIN-201ENST00000359551 THOC2Q8NI27 1593 aaKnown RBP41.39■■■■■ 4.22
SHARPIN-201ENST00000359551 WDR62O43379 1518 aa41.38■■■■■ 4.21
SHARPIN-201ENST00000359551 POLA1P09884 1462 aaPredicted RBP41.31■■■■■ 4.2
SHARPIN-201ENST00000359551 SOGA1O94964 1423 aa41.24■■■■■ 4.19
SHARPIN-201ENST00000359551 EEA1Q15075 1411 aa41.18■■■■■ 4.18
SHARPIN-201ENST00000359551 RUSC2Q8N2Y8 1516 aa41.13■■■■■ 4.17
SHARPIN-201ENST00000359551 RAD54L2Q9Y4B4 1467 aa41.1■■■■■ 4.17
SHARPIN-201ENST00000359551 WDR97A6NE52 1622 aa41.1■■■■■ 4.17
SHARPIN-201ENST00000359551 ABCA10Q8WWZ4 1543 aa41.09■■■■■ 4.17
SHARPIN-201ENST00000359551 TARBP1Q13395 1621 aaKnown RBP41.06■■■■■ 4.16
SHARPIN-201ENST00000359551 CUX2O14529 1486 aa41.06■■■■■ 4.16
SHARPIN-201ENST00000359551 FAM9AQ8IZU1 332 aaPredicted RBP41.04■■■■■ 4.16
SHARPIN-201ENST00000359551 KIF27Q86VH2 1401 aa41.01■■■■■ 4.16
SHARPIN-201ENST00000359551 IFT140Q96RY7 1462 aa40.93■■■■■ 4.14
SHARPIN-201ENST00000359551 CSRNP3Q8WYN3 585 aa40.88■■■■■ 4.14
SHARPIN-201ENST00000359551 ABCA5Q8WWZ7 1642 aa40.85■■■■■ 4.13
SHARPIN-201ENST00000359551 TDRD9Q8NDG6 1382 aaKnown RBP40.73■■■■■ 4.11
SHARPIN-201ENST00000359551 KIF21BO75037 1637 aa40.71■■■■■ 4.11
SHARPIN-201ENST00000359551 GAPVD1Q14C86 1478 aa40.7■■■■■ 4.11
SHARPIN-201ENST00000359551 IGF1RP08069 1367 aa40.68■■■■■ 4.1
SHARPIN-201ENST00000359551 ZNF608Q9ULD9 1512 aaPredicted RBP40.65■■■■■ 4.1
SHARPIN-201ENST00000359551 LOC105371045A0A1W2PR82 267 aa40.64■■■■■ 4.1
SHARPIN-201ENST00000359551 PRXQ9BXM0 1461 aa40.63■■■■■ 4.09
SHARPIN-201ENST00000359551 ERICH3Q5RHP9 1530 aa40.63■■■■■ 4.09
SHARPIN-201ENST00000359551 PBRM1Q86U86 1689 aa40.61■■■■■ 4.09
SHARPIN-201ENST00000359551 EIF4G3O43432 1585 aaKnown RBP40.59■■■■■ 4.09
SHARPIN-201ENST00000359551 AQRO60306 1485 aaKnown RBP eCLIP40.58■■■■■ 4.097e-9■■■■■ 34.6
SHARPIN-201ENST00000359551 CUL7Q14999 1698 aa40.55■■■■■ 4.08
SHARPIN-201ENST00000359551 GOLGA3Q08378 1498 aa40.53■■■■■ 4.08
SHARPIN-201ENST00000359551 GRIN2BQ13224 1484 aa40.49■■■■■ 4.07
SHARPIN-201ENST00000359551 RAPGEF2Q9Y4G8 1499 aa40.47■■■■■ 4.07
SHARPIN-201ENST00000359551 CARMIL1Q5VZK9 1371 aa40.46■■■■■ 4.07
SHARPIN-201ENST00000359551 EHMT2Q96KQ7 1210 aa40.37■■■■■ 4.05
SHARPIN-201ENST00000359551 ADAMTS12P58397 1594 aa40.34■■■■■ 4.05
SHARPIN-201ENST00000359551 TNIKQ9UKE5 1360 aa40.28■■■■■ 4.04
SHARPIN-201ENST00000359551 FHAD1B1AJZ9 1412 aa40.27■■■■■ 4.04
SHARPIN-201ENST00000359551 SNAPC4Q5SXM2 1469 aa40.25■■■■■ 4.03
SHARPIN-201ENST00000359551 MAGI1Q96QZ7 1491 aaPredicted RBP40.25■■■■■ 4.03
SHARPIN-201ENST00000359551 UBTFP17480 764 aaKnown RBP40.21■■■■■ 4.03
SHARPIN-201ENST00000359551 SYNJ2O15056 1496 aa40.07■■■■■ 4.01
SHARPIN-201ENST00000359551 CTTNBP2Q8WZ74 1663 aa40.03■■■■■ 4
SHARPIN-201ENST00000359551 GRIN2AQ12879 1464 aa40■■■■□ 3.99
SHARPIN-201ENST00000359551 CEP162Q5TB80 1403 aa39.99■■■■□ 3.99
SHARPIN-201ENST00000359551 CHMP7Q8WUX9 453 aaPredicted RBP39.87■■■■□ 3.97
SHARPIN-201ENST00000359551 CHD1O14646 1710 aa39.85■■■■□ 3.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms