RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 ARHGAP35Q9NRY4 1499 aa27.04■■□□□ 1.92
TPM1-205ENST00000357980 ARAP1Q96P48 1450 aa27.02■■□□□ 1.92
TPM1-205ENST00000357980 VPS8Q8N3P4 1428 aa26.98■■□□□ 1.91
TPM1-205ENST00000357980 EFCAB5A4FU69 1503 aa26.96■■□□□ 1.91
TPM1-205ENST00000357980 IQGAP2Q13576 1575 aa26.95■■□□□ 1.91
TPM1-205ENST00000357980 CHMP7Q8WUX9 453 aaPredicted RBP26.93■■□□□ 1.9
TPM1-205ENST00000357980 CEP170Q5SW79 1584 aa26.91■■□□□ 1.9
TPM1-205ENST00000357980 SAMD9Q5K651 1589 aa26.9■■□□□ 1.9
TPM1-205ENST00000357980 KIAA0586Q9BVV6 1533 aa26.9■■□□□ 1.9
TPM1-205ENST00000357980 NUP160Q12769 1436 aa26.89■■□□□ 1.9
TPM1-205ENST00000357980 CHD1O14646 1710 aa26.88■■□□□ 1.89
TPM1-205ENST00000357980 FBLN2P98095 1184 aa26.84■■□□□ 1.89
TPM1-205ENST00000357980 UGGT2Q9NYU1 1516 aa26.83■■□□□ 1.89
TPM1-205ENST00000357980 FHOD3Q2V2M9 1422 aa26.79■■□□□ 1.88
TPM1-205ENST00000357980 P3H3Q8IVL6 736 aa26.74■■□□□ 1.87
TPM1-205ENST00000357980 DISP1Q96F81 1524 aa26.69■■□□□ 1.86
TPM1-205ENST00000357980 KIAA0556O60303 1618 aa26.68■■□□□ 1.86
TPM1-205ENST00000357980 PCF11O94913 1555 aaKnown RBP26.68■■□□□ 1.86
TPM1-205ENST00000357980 FMN1Q68DA7 1419 aa26.67■■□□□ 1.86
TPM1-205ENST00000357980 PPARGC1BQ86YN6 1023 aaKnown RBP26.63■■□□□ 1.85
TPM1-205ENST00000357980 FYCO1Q9BQS8 1478 aa26.62■■□□□ 1.85
TPM1-205ENST00000357980 CASKIN1Q8WXD9 1431 aa26.61■■□□□ 1.85
TPM1-205ENST00000357980 JPH4Q96JJ6 628 aa26.59■■□□□ 1.85
TPM1-205ENST00000357980 SHROOM2Q13796 1616 aa26.58■■□□□ 1.85
TPM1-205ENST00000357980 APLP2Q06481 763 aa26.58■■□□□ 1.84
TPM1-205ENST00000357980 MAP3K1Q13233 1512 aa26.57■■□□□ 1.84
TPM1-205ENST00000357980 CLASP1Q7Z460 1538 aa26.57■■□□□ 1.84
TPM1-205ENST00000357980 TRIM26Q12899 539 aaPredicted RBP26.55■■□□□ 1.84
TPM1-205ENST00000357980 TIAM1Q13009 1591 aa26.54■■□□□ 1.84
TPM1-205ENST00000357980 CFAP43Q8NDM7 1665 aa26.54■■□□□ 1.84
TPM1-205ENST00000357980 CARMIL2Q6F5E8 1435 aa26.53■■□□□ 1.84
TPM1-205ENST00000357980 LRRIQ1Q96JM4 1722 aa26.5■■□□□ 1.83
TPM1-205ENST00000357980 PRG4Q92954 1404 aaPredicted RBP26.47■■□□□ 1.83
TPM1-205ENST00000357980 PCGF6Q9BYE7 350 aa26.46■■□□□ 1.83
TPM1-205ENST00000357980 TTBK1Q5TCY1 1321 aaPredicted RBP26.45■■□□□ 1.82
TPM1-205ENST00000357980 HECW1Q76N89 1606 aa26.44■■□□□ 1.82
TPM1-205ENST00000357980 KANK4Q5T7N3 995 aaPredicted RBP26.44■■□□□ 1.82
TPM1-205ENST00000357980 RAPGEF6Q8TEU7 1601 aa26.4■■□□□ 1.82
TPM1-205ENST00000357980 LRRC9Q6ZRR7 1453 aa26.4■■□□□ 1.82
TPM1-205ENST00000357980 ATP1B4Q9UN42 357 aaPredicted RBP26.38■■□□□ 1.81
TPM1-205ENST00000357980 ERCC6L2Q5T890 1561 aa26.36■■□□□ 1.81
TPM1-205ENST00000357980 CCDC18Q5T9S5 1454 aa26.36■■□□□ 1.81
TPM1-205ENST00000357980 EPRSP07814 1512 aaKnown RBP26.33■■□□□ 1.81
TPM1-205ENST00000357980 NUP153P49790 1475 aaKnown RBP26.32■■□□□ 1.8
TPM1-205ENST00000357980 PLB1Q6P1J6 1458 aa26.32■■□□□ 1.8
TPM1-205ENST00000357980 ABCA8O94911 1581 aa26.32■■□□□ 1.8
TPM1-205ENST00000357980 CDK13Q14004 1512 aaKnown RBP26.27■■□□□ 1.8
TPM1-205ENST00000357980 PTPRGP23470 1445 aa26.27■■□□□ 1.8
TPM1-205ENST00000357980 OSCARQ8IYS5 282 aa26.27■■□□□ 1.8
TPM1-205ENST00000357980 MAGI3Q5TCQ9 1506 aa26.23■■□□□ 1.79
TPM1-205ENST00000357980 EHBP1L1Q8N3D4 1523 aa26.23■■□□□ 1.79
TPM1-205ENST00000357980 MTUS2Q5JR59 1369 aa26.2■■□□□ 1.78
TPM1-205ENST00000357980 RRBP1Q9P2E9 1410 aaKnown RBP26.15■■□□□ 1.78
TPM1-205ENST00000357980 SUPT6HQ7KZ85 1726 aaKnown RBP26.15■■□□□ 1.78
TPM1-205ENST00000357980 UACAQ9BZF9 1416 aa26.15■■□□□ 1.78
TPM1-205ENST00000357980 PHLDB1Q86UU1 1377 aa26.13■■□□□ 1.77
TPM1-205ENST00000357980 ARID3CA6NKF2 412 aa26.13■■□□□ 1.77
TPM1-205ENST00000357980 ARHGEF11O15085 1522 aa26.11■■□□□ 1.77
TPM1-205ENST00000357980 ABCC2Q92887 1545 aa26.11■■□□□ 1.77
TPM1-205ENST00000357980 ATP10BO94823 1461 aa26.1■■□□□ 1.77
TPM1-205ENST00000357980 NCOA2Q15596 1464 aa26.09■■□□□ 1.77
TPM1-205ENST00000357980 UHRF1BP1LA0JNW5 1464 aa26.05■■□□□ 1.76
TPM1-205ENST00000357980 CCNB3Q8WWL7 1395 aa26.04■■□□□ 1.76
TPM1-205ENST00000357980 CDK11AQ9UQ88 783 aaPredicted RBP26.03■■□□□ 1.76
TPM1-205ENST00000357980 TROQ12816 1431 aaPredicted RBP26.03■■□□□ 1.76
TPM1-205ENST00000357980 ADCY10Q96PN6 1610 aa26.02■■□□□ 1.76
TPM1-205ENST00000357980 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26■■□□□ 1.75
TPM1-205ENST00000357980 HNRNPUL2Q1KMD3 747 aaKnown RBP26■■□□□ 1.75
TPM1-205ENST00000357980 MYOM3Q5VTT5 1437 aa25.98■■□□□ 1.75
TPM1-205ENST00000357980 FGD6Q6ZV73 1430 aa25.97■■□□□ 1.75
TPM1-205ENST00000357980 KDM5BQ9UGL1 1544 aa25.95■■□□□ 1.74
TPM1-205ENST00000357980 KIF14Q15058 1648 aa25.95■■□□□ 1.74
TPM1-205ENST00000357980 ZCCHC11Q5TAX3 1644 aaKnown RBP25.95■■□□□ 1.74
TPM1-205ENST00000357980 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.91■■□□□ 1.741e-7■■□□□ 13.6
TPM1-205ENST00000357980 PLEKHD1A6NEE1 506 aa25.9■■□□□ 1.74
TPM1-205ENST00000357980 PTPN23Q9H3S7 1636 aa25.87■■□□□ 1.73
TPM1-205ENST00000357980 MIA2Q96PC5 1412 aa25.85■■□□□ 1.73
TPM1-205ENST00000357980 ABCC10Q5T3U5 1492 aa25.84■■□□□ 1.73
TPM1-205ENST00000357980 ITSN2Q9NZM3 1697 aa25.84■■□□□ 1.73
TPM1-205ENST00000357980 TCOF1Q13428 1488 aaKnown RBP25.83■■□□□ 1.73
TPM1-205ENST00000357980 FAM50AQ14320 339 aaKnown RBP25.81■■□□□ 1.72
TPM1-205ENST00000357980 RIMBP3CA6NJZ7 1639 aa25.81■■□□□ 1.72
TPM1-205ENST00000357980 RIMBP3BA6NNM3 1639 aa25.81■■□□□ 1.72
TPM1-205ENST00000357980 RIMBP3Q9UFD9 1639 aa25.81■■□□□ 1.72
TPM1-205ENST00000357980 CDC42BPAQ5VT25 1732 aa25.8■■□□□ 1.72
TPM1-205ENST00000357980 GPATCH8Q9UKJ3 1502 aaKnown RBP25.79■■□□□ 1.72
TPM1-205ENST00000357980 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.73■■□□□ 1.71
TPM1-205ENST00000357980 TTC37Q6PGP7 1564 aa25.73■■□□□ 1.71
TPM1-205ENST00000357980 ITGAEP38570 1179 aa25.71■■□□□ 1.71
TPM1-205ENST00000357980 PREX2Q70Z35 1606 aa25.7■■□□□ 1.71
TPM1-205ENST00000357980 WDR7Q9Y4E6 1490 aa25.7■■□□□ 1.7
TPM1-205ENST00000357980 CDC42BPBQ9Y5S2 1711 aa25.67■■□□□ 1.7
TPM1-205ENST00000357980 PTPRKQ15262 1439 aa25.66■■□□□ 1.7
TPM1-205ENST00000357980 CAMSAP2Q08AD1 1489 aa25.66■■□□□ 1.7
TPM1-205ENST00000357980 MYO5CQ9NQX4 1742 aa25.65■■□□□ 1.7
TPM1-205ENST00000357980 CFDP1Q9UEE9 299 aaPredicted RBP25.65■■□□□ 1.7
TPM1-205ENST00000357980 ASXL2Q76L83 1435 aa25.64■■□□□ 1.7
TPM1-205ENST00000357980 DNMT1P26358 1616 aaKnown RBP25.64■■□□□ 1.69
TPM1-205ENST00000357980 ZNF644Q9H582 1327 aaPredicted RBP25.63■■□□□ 1.69
TPM1-205ENST00000357980 KCNH8Q96L42 1107 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms