RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 SHROOM2Q13796 1616 aa15.43■□□□□ 0.06
COL4A3BP-202ENST00000357457 ERICH3Q5RHP9 1530 aa15.42■□□□□ 0.06
COL4A3BP-202ENST00000357457 JPH4Q96JJ6 628 aa15.36■□□□□ 0.05
COL4A3BP-202ENST00000357457 PRG4Q92954 1404 aaPredicted RBP15.34■□□□□ 0.05
COL4A3BP-202ENST00000357457 KIF13AQ9H1H9 1805 aa15.31■□□□□ 0.04
COL4A3BP-202ENST00000357457 RUSC2Q8N2Y8 1516 aa15.24■□□□□ 0.03
COL4A3BP-202ENST00000357457 IGF1RP08069 1367 aa15.23■□□□□ 0.03
COL4A3BP-202ENST00000357457 ABCC10Q5T3U5 1492 aa15.22■□□□□ 0.03
COL4A3BP-202ENST00000357457 MSH5O43196 834 aa15.22■□□□□ 0.03
COL4A3BP-202ENST00000357457 NPM1P06748 294 aaKnown RBP eCLIP15.22■□□□□ 0.03
COL4A3BP-202ENST00000357457 FAM69CQ0P6D2 419 aa15.21■□□□□ 0.03
COL4A3BP-202ENST00000357457 ADRA2BP18089 450 aa15.2■□□□□ 0.02
COL4A3BP-202ENST00000357457 MAPKBP1O60336 1514 aa15.2■□□□□ 0.02
COL4A3BP-202ENST00000357457 KIAA0586Q9BVV6 1533 aa15.2■□□□□ 0.02
COL4A3BP-202ENST00000357457 POTEDQ86YR6 584 aa15.19■□□□□ 0.02
COL4A3BP-202ENST00000357457 ADCY10Q96PN6 1610 aa15.17■□□□□ 0.02
COL4A3BP-202ENST00000357457 KIF27Q86VH2 1401 aa15.17■□□□□ 0.02
COL4A3BP-202ENST00000357457 PPP6R1Q9UPN7 881 aa15.15■□□□□ 0.02
COL4A3BP-202ENST00000357457 DIP2BQ9P265 1576 aa15.15■□□□□ 0.02
COL4A3BP-202ENST00000357457 CUL7Q14999 1698 aa15.13■□□□□ 0.01
COL4A3BP-202ENST00000357457 CARMIL1Q5VZK9 1371 aa15.1■□□□□ 0.01
COL4A3BP-202ENST00000357457 PIAS4Q8N2W9 510 aaPredicted RBP15.09■□□□□ 0.01
COL4A3BP-202ENST00000357457 PTPRGP23470 1445 aa15.09■□□□□ 0.01
COL4A3BP-202ENST00000357457 TSPOAP1O95153 1857 aa15.06■□□□□ 0
COL4A3BP-202ENST00000357457 TNIKQ9UKE5 1360 aa15.05■□□□□ -0
COL4A3BP-202ENST00000357457 KDM4FA0A1W2PPD8 638 aa15.04■□□□□ -0
COL4A3BP-202ENST00000357457 KDM6BO15054 1643 aa15.03■□□□□ -0
COL4A3BP-202ENST00000357457 CARMIL2Q6F5E8 1435 aa15.03■□□□□ -0
COL4A3BP-202ENST00000357457 ABCC2Q92887 1545 aa15.02□□□□□ -0.01
COL4A3BP-202ENST00000357457 UHRF1BP1LA0JNW5 1464 aa15□□□□□ -0.01
COL4A3BP-202ENST00000357457 IQGAP2Q13576 1575 aa14.99□□□□□ -0.01
COL4A3BP-202ENST00000357457 PLB1Q6P1J6 1458 aa14.99□□□□□ -0.01
COL4A3BP-202ENST00000357457 GLI2P10070 1586 aa14.98□□□□□ -0.01
COL4A3BP-202ENST00000357457 ASXL2Q76L83 1435 aa14.98□□□□□ -0.01
COL4A3BP-202ENST00000357457 DISP1Q96F81 1524 aa14.97□□□□□ -0.01
COL4A3BP-202ENST00000357457 TTBK1Q5TCY1 1321 aaPredicted RBP14.97□□□□□ -0.01
COL4A3BP-202ENST00000357457 UACAQ9BZF9 1416 aa14.97□□□□□ -0.01
COL4A3BP-202ENST00000357457 PPRC1Q5VV67 1664 aaKnown RBP14.95□□□□□ -0.02
COL4A3BP-202ENST00000357457 KDM5BQ9UGL1 1544 aa14.93□□□□□ -0.02
COL4A3BP-202ENST00000357457 UGGT2Q9NYU1 1516 aa14.92□□□□□ -0.02
COL4A3BP-202ENST00000357457 RAPGEF2Q9Y4G8 1499 aa14.92□□□□□ -0.02
COL4A3BP-202ENST00000357457 EPRSP07814 1512 aaKnown RBP14.9□□□□□ -0.02
COL4A3BP-202ENST00000357457 COL17A1Q9UMD9 1497 aaPredicted RBP14.89□□□□□ -0.03
COL4A3BP-202ENST00000357457 MAP3K4Q9Y6R4 1608 aa14.87□□□□□ -0.03
COL4A3BP-202ENST00000357457 KIAA0556O60303 1618 aa14.85□□□□□ -0.03
COL4A3BP-202ENST00000357457 ZCCHC11Q5TAX3 1644 aaKnown RBP14.85□□□□□ -0.03
COL4A3BP-202ENST00000357457 TEX14Q8IWB6 1497 aa14.83□□□□□ -0.03
COL4A3BP-202ENST00000357457 ADGRL1O94910 1474 aa14.81□□□□□ -0.04
COL4A3BP-202ENST00000357457 WDR7Q9Y4E6 1490 aa14.8□□□□□ -0.04
COL4A3BP-202ENST00000357457 CTTNBP2Q8WZ74 1663 aa14.77□□□□□ -0.05
COL4A3BP-202ENST00000357457 GOLGA3Q08378 1498 aa14.76□□□□□ -0.05
COL4A3BP-202ENST00000357457 ABCA8O94911 1581 aa14.76□□□□□ -0.05
COL4A3BP-202ENST00000357457 MAGI3Q5TCQ9 1506 aa14.76□□□□□ -0.05
COL4A3BP-202ENST00000357457 PRXQ9BXM0 1461 aa14.75□□□□□ -0.05
COL4A3BP-202ENST00000357457 CD109Q6YHK3 1445 aa14.75□□□□□ -0.05
COL4A3BP-202ENST00000357457 CFAP43Q8NDM7 1665 aa14.74□□□□□ -0.05
COL4A3BP-202ENST00000357457 ILDR1Q86SU0 546 aaPredicted RBP14.73□□□□□ -0.05
COL4A3BP-202ENST00000357457 KCNH8Q96L42 1107 aa14.73□□□□□ -0.05
COL4A3BP-202ENST00000357457 ARAP3Q8WWN8 1544 aa14.66□□□□□ -0.06
COL4A3BP-202ENST00000357457 HECW2Q9P2P5 1572 aa14.65□□□□□ -0.06
COL4A3BP-202ENST00000357457 ATP10BO94823 1461 aa14.65□□□□□ -0.06
COL4A3BP-202ENST00000357457 FAM9AQ8IZU1 332 aaPredicted RBP14.65□□□□□ -0.06
COL4A3BP-202ENST00000357457 PHLDB1Q86UU1 1377 aa14.63□□□□□ -0.07
COL4A3BP-202ENST00000357457 P3H3Q8IVL6 736 aa14.61□□□□□ -0.07
COL4A3BP-202ENST00000357457 CSRNP3Q8WYN3 585 aa14.6□□□□□ -0.07
COL4A3BP-202ENST00000357457 ABCA9Q8IUA7 1624 aa14.59□□□□□ -0.07
COL4A3BP-202ENST00000357457 ARID3CA6NKF2 412 aa14.58□□□□□ -0.08
COL4A3BP-202ENST00000357457 SAMD9Q5K651 1589 aa14.57□□□□□ -0.08
COL4A3BP-202ENST00000357457 KIF21BO75037 1637 aa14.57□□□□□ -0.08
COL4A3BP-202ENST00000357457 RAPGEF3O95398 923 aa14.55□□□□□ -0.08
COL4A3BP-202ENST00000357457 NEO1Q92859 1461 aa14.55□□□□□ -0.08
COL4A3BP-202ENST00000357457 RAPGEF6Q8TEU7 1601 aa14.54□□□□□ -0.08
COL4A3BP-202ENST00000357457 ADAMTSL3P82987 1691 aa14.52□□□□□ -0.08
COL4A3BP-202ENST00000357457 PTPRMP28827 1452 aa14.5□□□□□ -0.09
COL4A3BP-202ENST00000357457 NUP153P49790 1475 aaKnown RBP14.5□□□□□ -0.09
COL4A3BP-202ENST00000357457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.49□□□□□ -0.09
COL4A3BP-202ENST00000357457 HNRNPUL2Q1KMD3 747 aaKnown RBP14.49□□□□□ -0.09
COL4A3BP-202ENST00000357457 PLEKHD1A6NEE1 506 aa14.48□□□□□ -0.09
COL4A3BP-202ENST00000357457 EEA1Q15075 1411 aa14.48□□□□□ -0.09
COL4A3BP-202ENST00000357457 FRMPD1Q5SYB0 1578 aa14.47□□□□□ -0.09
COL4A3BP-202ENST00000357457 BCORL1Q5H9F3 1711 aa14.46□□□□□ -0.09
COL4A3BP-202ENST00000357457 FHOD3Q2V2M9 1422 aa14.45□□□□□ -0.1
COL4A3BP-202ENST00000357457 AKNAQ7Z591 1439 aa14.43□□□□□ -0.1
COL4A3BP-202ENST00000357457 FBXO41Q8TF61 875 aa14.43□□□□□ -0.1
COL4A3BP-202ENST00000357457 DENND4BO75064 1496 aaPredicted RBP14.43□□□□□ -0.1
COL4A3BP-202ENST00000357457 ARID4BQ4LE39 1312 aaPredicted RBP14.42□□□□□ -0.1
COL4A3BP-202ENST00000357457 RICTORQ6R327 1708 aa14.42□□□□□ -0.1
COL4A3BP-202ENST00000357457 RANGAP1P46060 587 aaPredicted RBP14.42□□□□□ -0.1
COL4A3BP-202ENST00000357457 MADDQ8WXG6 1647 aa14.41□□□□□ -0.1
COL4A3BP-202ENST00000357457 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.41□□□□□ -0.1
COL4A3BP-202ENST00000357457 FANCAO15360 1455 aa14.39□□□□□ -0.11
COL4A3BP-202ENST00000357457 EFCAB5A4FU69 1503 aa14.39□□□□□ -0.11
COL4A3BP-202ENST00000357457 ARHGEF40Q8TER5 1519 aa14.39□□□□□ -0.11
COL4A3BP-202ENST00000357457 PCF11O94913 1555 aaKnown RBP14.38□□□□□ -0.11
COL4A3BP-202ENST00000357457 CFAP74Q9C0B2 1584 aa14.38□□□□□ -0.11
COL4A3BP-202ENST00000357457 LMTK3Q96Q04 1460 aa14.38□□□□□ -0.11
COL4A3BP-202ENST00000357457 MAGI2Q86UL8 1455 aa14.37□□□□□ -0.11
COL4A3BP-202ENST00000357457 ZMYM4Q5VZL5 1548 aa14.36□□□□□ -0.11
COL4A3BP-202ENST00000357457 TTC37Q6PGP7 1564 aa14.35□□□□□ -0.11
COL4A3BP-202ENST00000357457 RIMS1Q86UR5 1692 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms