RNA–Protein interactions for RNA: ENST00000356534.7

CHRD-203, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 1,252 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-203ENST00000356534 ERCC6L2Q5T890 1561 aa34.45■■■■□ 3.11
CHRD-203ENST00000356534 RAPGEF2Q9Y4G8 1499 aa34.44■■■■□ 3.1
CHRD-203ENST00000356534 PRG4Q92954 1404 aaPredicted RBP34.39■■■■□ 3.1
CHRD-203ENST00000356534 JPH4Q96JJ6 628 aa34.39■■■■□ 3.1
CHRD-203ENST00000356534 IQGAP2Q13576 1575 aa34.36■■■■□ 3.09
CHRD-203ENST00000356534 CTTNBP2Q8WZ74 1663 aa34.33■■■■□ 3.09
CHRD-203ENST00000356534 EEA1Q15075 1411 aa34.3■■■■□ 3.08
CHRD-203ENST00000356534 PRXQ9BXM0 1461 aa34.25■■■■□ 3.07
CHRD-203ENST00000356534 CARMIL2Q6F5E8 1435 aa34.17■■■■□ 3.06
CHRD-203ENST00000356534 UGGT2Q9NYU1 1516 aa34.12■■■■□ 3.05
CHRD-203ENST00000356534 CHIC1Q5VXU3 224 aa34.1■■■■□ 3.05
CHRD-203ENST00000356534 CSRNP3Q8WYN3 585 aa34.1■■■■□ 3.05
CHRD-203ENST00000356534 KIAA0556O60303 1618 aa34.02■■■■□ 3.04
CHRD-203ENST00000356534 TNIKQ9UKE5 1360 aa34.01■■■■□ 3.04
CHRD-203ENST00000356534 DISP1Q96F81 1524 aa34■■■■□ 3.03
CHRD-203ENST00000356534 KIF21BO75037 1637 aa33.98■■■■□ 3.03
CHRD-203ENST00000356534 ADCY10Q96PN6 1610 aa33.98■■■■□ 3.03
CHRD-203ENST00000356534 PTPRGP23470 1445 aa33.96■■■■□ 3.03
CHRD-203ENST00000356534 GOLGA3Q08378 1498 aa33.96■■■■□ 3.03
CHRD-203ENST00000356534 TRHP20396 242 aaPredicted RBP33.95■■■■□ 3.03
CHRD-203ENST00000356534 NPM1P06748 294 aaKnown RBP eCLIP33.85■■■■□ 3.01
CHRD-203ENST00000356534 MAPKBP1O60336 1514 aa33.84■■■■□ 3.01
CHRD-203ENST00000356534 FAM9AQ8IZU1 332 aaPredicted RBP33.84■■■■□ 3.01
CHRD-203ENST00000356534 UHRF1BP1LA0JNW5 1464 aa33.8■■■■□ 3
CHRD-203ENST00000356534 KIF13AQ9H1H9 1805 aa33.79■■■■□ 3
CHRD-203ENST00000356534 ABCC2Q92887 1545 aa33.78■■■■□ 3
CHRD-203ENST00000356534 UACAQ9BZF9 1416 aa33.77■■■■□ 3
CHRD-203ENST00000356534 TTBK1Q5TCY1 1321 aaPredicted RBP33.76■■■□□ 2.99
CHRD-203ENST00000356534 SAMD9Q5K651 1589 aa33.75■■■□□ 2.99
CHRD-203ENST00000356534 DIP2BQ9P265 1576 aa33.64■■■□□ 2.98
CHRD-203ENST00000356534 ABCC10Q5T3U5 1492 aa33.63■■■□□ 2.97
CHRD-203ENST00000356534 ABCA8O94911 1581 aa33.62■■■□□ 2.97
CHRD-203ENST00000356534 KDM5BQ9UGL1 1544 aa33.62■■■□□ 2.97
CHRD-203ENST00000356534 ZCCHC11Q5TAX3 1644 aaKnown RBP33.61■■■□□ 2.97
CHRD-203ENST00000356534 EFCAB5A4FU69 1503 aa33.61■■■□□ 2.97
CHRD-203ENST00000356534 PLB1Q6P1J6 1458 aa33.56■■■□□ 2.96
CHRD-203ENST00000356534 ASXL2Q76L83 1435 aa33.51■■■□□ 2.95
CHRD-203ENST00000356534 UBTFP17480 764 aaKnown RBP33.5■■■□□ 2.95
CHRD-203ENST00000356534 RAPGEF6Q8TEU7 1601 aa33.47■■■□□ 2.95
CHRD-203ENST00000356534 FAM69CQ0P6D2 419 aa33.45■■■□□ 2.95
CHRD-203ENST00000356534 P3H3Q8IVL6 736 aa33.45■■■□□ 2.95
CHRD-203ENST00000356534 GLI2P10070 1586 aa33.43■■■□□ 2.94
CHRD-203ENST00000356534 TSPOAP1O95153 1857 aa33.42■■■□□ 2.94
CHRD-203ENST00000356534 FHOD3Q2V2M9 1422 aa33.4■■■□□ 2.94
CHRD-203ENST00000356534 RANGAP1P46060 587 aaPredicted RBP33.38■■■□□ 2.93
CHRD-203ENST00000356534 WDR7Q9Y4E6 1490 aa33.37■■■□□ 2.93
CHRD-203ENST00000356534 EHMT2Q96KQ7 1210 aa33.35■■■□□ 2.93
CHRD-203ENST00000356534 EPRSP07814 1512 aaKnown RBP33.33■■■□□ 2.93
CHRD-203ENST00000356534 MAP3K4Q9Y6R4 1608 aa33.29■■■□□ 2.92
CHRD-203ENST00000356534 ARHGAP35Q9NRY4 1499 aa33.26■■■□□ 2.92
CHRD-203ENST00000356534 CFAP43Q8NDM7 1665 aa33.26■■■□□ 2.91
CHRD-203ENST00000356534 ATP10BO94823 1461 aa33.25■■■□□ 2.91
CHRD-203ENST00000356534 FMN1Q68DA7 1419 aa33.24■■■□□ 2.91
CHRD-203ENST00000356534 PPRC1Q5VV67 1664 aaKnown RBP33.23■■■□□ 2.91
CHRD-203ENST00000356534 NUP153P49790 1475 aaKnown RBP33.23■■■□□ 2.91
CHRD-203ENST00000356534 HECW1Q76N89 1606 aa33.18■■■□□ 2.9
CHRD-203ENST00000356534 KDM6BO15054 1643 aa33.17■■■□□ 2.9
CHRD-203ENST00000356534 TEX14Q8IWB6 1497 aa33.16■■■□□ 2.9
CHRD-203ENST00000356534 ARID3CA6NKF2 412 aa33.09■■■□□ 2.89
CHRD-203ENST00000356534 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.07■■■□□ 2.88
CHRD-203ENST00000356534 HNRNPUL2Q1KMD3 747 aaKnown RBP33.07■■■□□ 2.88
CHRD-203ENST00000356534 ABCA9Q8IUA7 1624 aa33.06■■■□□ 2.88
CHRD-203ENST00000356534 MAGI3Q5TCQ9 1506 aa33.03■■■□□ 2.88
CHRD-203ENST00000356534 KCNH8Q96L42 1107 aa33.03■■■□□ 2.88
CHRD-203ENST00000356534 CLIP1P30622 1438 aa33.02■■■□□ 2.88
CHRD-203ENST00000356534 CD109Q6YHK3 1445 aa33.02■■■□□ 2.88
CHRD-203ENST00000356534 CDK13Q14004 1512 aaKnown RBP32.98■■■□□ 2.87
CHRD-203ENST00000356534 PLEKHD1A6NEE1 506 aa32.96■■■□□ 2.87
CHRD-203ENST00000356534 PCF11O94913 1555 aaKnown RBP32.96■■■□□ 2.87
CHRD-203ENST00000356534 LRRIQ1Q96JM4 1722 aa32.95■■■□□ 2.87
CHRD-203ENST00000356534 CASKIN1Q8WXD9 1431 aa32.91■■■□□ 2.86
CHRD-203ENST00000356534 CCDC18Q5T9S5 1454 aa32.9■■■□□ 2.86
CHRD-203ENST00000356534 FYCO1Q9BQS8 1478 aa32.89■■■□□ 2.86
CHRD-203ENST00000356534 ATP1B4Q9UN42 357 aaPredicted RBP32.88■■■□□ 2.85
CHRD-203ENST00000356534 CDK11AQ9UQ88 783 aaPredicted RBP32.86■■■□□ 2.85
CHRD-203ENST00000356534 CEP162Q5TB80 1403 aa32.84■■■□□ 2.85
CHRD-203ENST00000356534 CFAP74Q9C0B2 1584 aa32.83■■■□□ 2.85
CHRD-203ENST00000356534 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.81■■■□□ 2.84
CHRD-203ENST00000356534 PHLDB1Q86UU1 1377 aa32.81■■■□□ 2.84
CHRD-203ENST00000356534 KIF14Q15058 1648 aa32.8■■■□□ 2.84
CHRD-203ENST00000356534 TTC37Q6PGP7 1564 aa32.79■■■□□ 2.84
CHRD-203ENST00000356534 NEO1Q92859 1461 aa32.79■■■□□ 2.84
CHRD-203ENST00000356534 MYO5CQ9NQX4 1742 aa32.77■■■□□ 2.84
CHRD-203ENST00000356534 TROQ12816 1431 aaPredicted RBP32.75■■■□□ 2.83
CHRD-203ENST00000356534 ARAP3Q8WWN8 1544 aa32.74■■■□□ 2.83
CHRD-203ENST00000356534 COL17A1Q9UMD9 1497 aaPredicted RBP32.74■■■□□ 2.83
CHRD-203ENST00000356534 FANCAO15360 1455 aa32.64■■■□□ 2.82
CHRD-203ENST00000356534 LOC105371045A0A1W2PR82 267 aa32.6■■■□□ 2.81
CHRD-203ENST00000356534 PLCH2O75038 1416 aa32.59■■■□□ 2.81
CHRD-203ENST00000356534 AKNAQ7Z591 1439 aa32.56■■■□□ 2.8
CHRD-203ENST00000356534 RICTORQ6R327 1708 aa32.56■■■□□ 2.8
CHRD-203ENST00000356534 PREX2Q70Z35 1606 aa32.55■■■□□ 2.8
CHRD-203ENST00000356534 CDC42BPBQ9Y5S2 1711 aa32.53■■■□□ 2.8
CHRD-203ENST00000356534 FRMPD1Q5SYB0 1578 aa32.52■■■□□ 2.8
CHRD-203ENST00000356534 DENND4BO75064 1496 aaPredicted RBP32.51■■■□□ 2.79
CHRD-203ENST00000356534 AEBP2Q6ZN18 517 aaPredicted RBP32.51■■■□□ 2.79
CHRD-203ENST00000356534 CDC42BPAQ5VT25 1732 aa32.51■■■□□ 2.79
CHRD-203ENST00000356534 ARHGAP5Q13017 1502 aa32.49■■■□□ 2.79
CHRD-203ENST00000356534 VPS8Q8N3P4 1428 aa32.49■■■□□ 2.79
CHRD-203ENST00000356534 EHBP1L1Q8N3D4 1523 aa32.48■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms