RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 IFT140Q96RY7 1462 aa6.96□□□□□ -1.29
CNOT4-202ENST00000356162 POTEHQ6S545 545 aa6.96□□□□□ -1.3
CNOT4-202ENST00000356162 WDR97A6NE52 1622 aa6.95□□□□□ -1.3
CNOT4-202ENST00000356162 TOP2BQ02880 1626 aa6.94□□□□□ -1.3
CNOT4-202ENST00000356162 TARBP1Q13395 1621 aaKnown RBP6.94□□□□□ -1.3
CNOT4-202ENST00000356162 POLA1P09884 1462 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-202ENST00000356162 RBM42Q9BTD8 480 aaKnown RBP6.94□□□□□ -1.3
CNOT4-202ENST00000356162 FGD5Q6ZNL6 1462 aa6.93□□□□□ -1.3
CNOT4-202ENST00000356162 SYNJ1O43426 1573 aa6.93□□□□□ -1.3
CNOT4-202ENST00000356162 WRNQ14191 1432 aaPredicted RBP eCLIP6.93□□□□□ -1.3
CNOT4-202ENST00000356162 EIF4G3O43432 1585 aaKnown RBP6.92□□□□□ -1.3
CNOT4-202ENST00000356162 SOGA1O94964 1423 aa6.89□□□□□ -1.31
CNOT4-202ENST00000356162 ABCA10Q8WWZ4 1543 aa6.89□□□□□ -1.31
CNOT4-202ENST00000356162 ZNF608Q9ULD9 1512 aaPredicted RBP6.89□□□□□ -1.31
CNOT4-202ENST00000356162 RAD54L2Q9Y4B4 1467 aa6.89□□□□□ -1.31
CNOT4-202ENST00000356162 OSCARQ8IYS5 282 aa6.88□□□□□ -1.31
CNOT4-202ENST00000356162 ABCA5Q8WWZ7 1642 aa6.88□□□□□ -1.31
CNOT4-202ENST00000356162 PBRM1Q86U86 1689 aa6.87□□□□□ -1.31
CNOT4-202ENST00000356162 FBLN2P98095 1184 aa6.87□□□□□ -1.31
CNOT4-202ENST00000356162 MKRN4PQ13434 485 aaPredicted RBP6.86□□□□□ -1.31
CNOT4-202ENST00000356162 GRIN2BQ13224 1484 aa6.84□□□□□ -1.31
CNOT4-202ENST00000356162 AQRO60306 1485 aaKnown RBP eCLIP6.84□□□□□ -1.32
CNOT4-202ENST00000356162 GAPVD1Q14C86 1478 aa6.83□□□□□ -1.32
CNOT4-202ENST00000356162 MAGI1Q96QZ7 1491 aaPredicted RBP6.83□□□□□ -1.32
CNOT4-202ENST00000356162 CHD1O14646 1710 aa6.83□□□□□ -1.32
CNOT4-202ENST00000356162 AKT1S1Q96B36 256 aa6.82□□□□□ -1.32
CNOT4-202ENST00000356162 SNAPC4Q5SXM2 1469 aa6.82□□□□□ -1.32
CNOT4-202ENST00000356162 ADAMTS12P58397 1594 aa6.82□□□□□ -1.32
CNOT4-202ENST00000356162 TDRD9Q8NDG6 1382 aaKnown RBP6.82□□□□□ -1.32
CNOT4-202ENST00000356162 ERICH3Q5RHP9 1530 aa6.81□□□□□ -1.32
CNOT4-202ENST00000356162 SYNJ2O15056 1496 aa6.79□□□□□ -1.32
CNOT4-202ENST00000356162 CUL7Q14999 1698 aa6.79□□□□□ -1.32
CNOT4-202ENST00000356162 SPDYE2BA6NHP3 402 aa6.78□□□□□ -1.32
CNOT4-202ENST00000356162 SPDYE6P0CI01 402 aa6.78□□□□□ -1.32
CNOT4-202ENST00000356162 SPDYE2Q495Y8 402 aa6.78□□□□□ -1.32
CNOT4-202ENST00000356162 KIF27Q86VH2 1401 aa6.78□□□□□ -1.32
CNOT4-202ENST00000356162 FHAD1B1AJZ9 1412 aa6.76□□□□□ -1.33
CNOT4-202ENST00000356162 REM2Q8IYK8 340 aaPredicted RBP6.76□□□□□ -1.33
CNOT4-202ENST00000356162 CLASP1Q7Z460 1538 aa6.76□□□□□ -1.33
CNOT4-202ENST00000356162 GRIN2AQ12879 1464 aa6.75□□□□□ -1.33
CNOT4-202ENST00000356162 DNAJC5Q9H3Z4 198 aa6.74□□□□□ -1.33
CNOT4-202ENST00000356162 CHRDL2Q6WN34 429 aa6.74□□□□□ -1.33
CNOT4-202ENST00000356162 NUP160Q12769 1436 aa6.73□□□□□ -1.33
CNOT4-202ENST00000356162 TRIM41Q8WV44 630 aa6.72□□□□□ -1.33
CNOT4-202ENST00000356162 SSUH2Q9Y2M2 353 aa6.72□□□□□ -1.33
CNOT4-202ENST00000356162 CEP170Q5SW79 1584 aa6.72□□□□□ -1.33
CNOT4-202ENST00000356162 IGF1RP08069 1367 aa6.72□□□□□ -1.33
CNOT4-202ENST00000356162 CHMP7Q8WUX9 453 aaPredicted RBP6.71□□□□□ -1.33
CNOT4-202ENST00000356162 ZNF692Q9BU19 519 aaPredicted RBP6.71□□□□□ -1.33
CNOT4-202ENST00000356162 EEA1Q15075 1411 aa6.71□□□□□ -1.33
CNOT4-202ENST00000356162 RUSC2Q8N2Y8 1516 aa6.71□□□□□ -1.34
CNOT4-202ENST00000356162 RIMBP3CA6NJZ7 1639 aa6.7□□□□□ -1.34
CNOT4-202ENST00000356162 RIMBP3BA6NNM3 1639 aa6.7□□□□□ -1.34
CNOT4-202ENST00000356162 SHROOM2Q13796 1616 aa6.7□□□□□ -1.34
CNOT4-202ENST00000356162 RIMBP3Q9UFD9 1639 aa6.7□□□□□ -1.34
CNOT4-202ENST00000356162 ARHGEF11O15085 1522 aa6.69□□□□□ -1.34
CNOT4-202ENST00000356162 CARMIL1Q5VZK9 1371 aa6.69□□□□□ -1.34
CNOT4-202ENST00000356162 PITPNM1O00562 1244 aa6.68□□□□□ -1.34
CNOT4-202ENST00000356162 RAPGEF2Q9Y4G8 1499 aa6.68□□□□□ -1.34
CNOT4-202ENST00000356162 CTTNBP2Q8WZ74 1663 aa6.67□□□□□ -1.34
CNOT4-202ENST00000356162 PRXQ9BXM0 1461 aa6.67□□□□□ -1.34
CNOT4-202ENST00000356162 KIF21BO75037 1637 aa6.66□□□□□ -1.34
CNOT4-202ENST00000356162 KIAA0586Q9BVV6 1533 aa6.66□□□□□ -1.34
CNOT4-202ENST00000356162 IQGAP2Q13576 1575 aa6.65□□□□□ -1.34
CNOT4-202ENST00000356162 ARAP1Q96P48 1450 aa6.64□□□□□ -1.35
CNOT4-202ENST00000356162 SPDYE1Q8NFV5 336 aaPredicted RBP6.63□□□□□ -1.35
CNOT4-202ENST00000356162 UGGT2Q9NYU1 1516 aa6.62□□□□□ -1.35
CNOT4-202ENST00000356162 ERCC6L2Q5T890 1561 aa6.62□□□□□ -1.35
CNOT4-202ENST00000356162 PIP4P2Q8N4L2 257 aa6.62□□□□□ -1.35
CNOT4-202ENST00000356162 PRG4Q92954 1404 aaPredicted RBP6.61□□□□□ -1.35
CNOT4-202ENST00000356162 FXR2P51116 673 aaKnown RBP eCLIP6.61□□□□□ -1.35
CNOT4-202ENST00000356162 KIAA0556O60303 1618 aa6.6□□□□□ -1.35
CNOT4-202ENST00000356162 SPDYE4A6NLX3 237 aa6.6□□□□□ -1.35
CNOT4-202ENST00000356162 GOLGA3Q08378 1498 aa6.59□□□□□ -1.35
CNOT4-202ENST00000356162 CLEC11AQ9Y240 323 aa6.59□□□□□ -1.35
CNOT4-202ENST00000356162 JPH4Q96JJ6 628 aa6.58□□□□□ -1.36
CNOT4-202ENST00000356162 CARMIL2Q6F5E8 1435 aa6.58□□□□□ -1.36
CNOT4-202ENST00000356162 DISP1Q96F81 1524 aa6.57□□□□□ -1.36
CNOT4-202ENST00000356162 SAMD9Q5K651 1589 aa6.57□□□□□ -1.36
CNOT4-202ENST00000356162 EFCAB5A4FU69 1503 aa6.56□□□□□ -1.36
CNOT4-202ENST00000356162 TNIKQ9UKE5 1360 aa6.55□□□□□ -1.36
CNOT4-202ENST00000356162 FAM9AQ8IZU1 332 aaPredicted RBP6.55□□□□□ -1.36
CNOT4-202ENST00000356162 ADCY10Q96PN6 1610 aa6.54□□□□□ -1.36
CNOT4-202ENST00000356162 CYB5RLQ6IPT4 315 aa6.53□□□□□ -1.36
CNOT4-202ENST00000356162 UHRF1BP1LA0JNW5 1464 aa6.53□□□□□ -1.36
CNOT4-202ENST00000356162 PTPRGP23470 1445 aa6.52□□□□□ -1.37
CNOT4-202ENST00000356162 ABCC2Q92887 1545 aa6.52□□□□□ -1.37
CNOT4-202ENST00000356162 ABCA8O94911 1581 aa6.51□□□□□ -1.37
CNOT4-202ENST00000356162 PRR29P0C7W0 189 aa6.51□□□□□ -1.37
CNOT4-202ENST00000356162 PRKAR2AP13861 404 aaKnown RBP6.51□□□□□ -1.37
CNOT4-202ENST00000356162 MAPKBP1O60336 1514 aa6.5□□□□□ -1.37
CNOT4-202ENST00000356162 UACAQ9BZF9 1416 aa6.5□□□□□ -1.37
CNOT4-202ENST00000356162 RAPGEF6Q8TEU7 1601 aa6.49□□□□□ -1.37
CNOT4-202ENST00000356162 PROM2Q8N271 834 aa6.49□□□□□ -1.37
CNOT4-202ENST00000356162 ZCCHC11Q5TAX3 1644 aaKnown RBP6.48□□□□□ -1.37
CNOT4-202ENST00000356162 UBTFP17480 764 aaKnown RBP6.48□□□□□ -1.37
CNOT4-202ENST00000356162 FHOD3Q2V2M9 1422 aa6.48□□□□□ -1.37
CNOT4-202ENST00000356162 ARHGAP35Q9NRY4 1499 aa6.48□□□□□ -1.37
CNOT4-202ENST00000356162 KDM5BQ9UGL1 1544 aa6.48□□□□□ -1.37
CNOT4-202ENST00000356162 STAG3Q9UJ98 1225 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms